华南地区猪圆环病毒和猪繁殖与呼吸综合征病毒检测分析

为了解华南地区猪圆环病毒及猪繁殖与呼吸综合征病毒的最新流行情况,采集了华南地区11个规模猪场各饲养阶段猪血清807份,用套式PCR(nPCR)检测猪圆环病毒1型(PCV-1)和猪圆环病毒2型(PCV-2);采集了若干猪场2010年1月至2011年8月期间有咳嗽、喘气、消瘦及疑似PDNS等临床症状的猪血清312份,以及无临床症状猪血清104份,以nPCR检测PCV-2,以一步法反转录PCR(RT-PCR)检测猪繁殖与呼吸综合征病毒。结果发现,所调查的11个规模猪场中只有5个检出PCV-1,所有猪场均检出PCV-2。PCV-2阳性率为30.61%,而PCV-1阳性率仅为4.21%;经产母猪和7周龄以上保育猪PCV阳性率最高;有临床症状的猪血清PCV-2阳性率为58.65%,PRRSV阳性率为37.82%,PCV-2阳性猪群中有39.89%的猪同时感染PRRSV;有症状猪群7月～9月的PCV-2感染率最高,而1月～3月最低;无临床症状猪血清PCV-2阳性率为27.9%,PRRSV阳性率为0.96%,PCV-2与PRRSV无混合感染。证明PCV尤其是PCV-2在华南地区仍广泛传播并流行,而且PCV-2与PRRSV混合感染致病情况较多。PCV-2的感染率与季节有一定的相关性,种猪带毒情况严重。     

Seroprevalence of economically important viral pathogens in swine populations of Trinidad and Tobago,West Indies

The objective of this study was to evaluate the seroprevalence and identify the strains of swine influenza virus (SwIV), as well as the seroprevalence of porcine parvovirus (PPV), transmissible gastroenteritis virus (TGEV), porcine reproductive and respiratory syndrome virus (PRRSV), porcine respiratory coronavirus (PRCV), porcine circovirus type 2 (PCV-2), and classical swine fever virus (CSFV) in pigs in Trinidad and Tobago (T&T). Blood samples (309) were randomly collected from pigs at farms throughout T&T. Serum samples were tested for the presence of antibodies to the aforementioned viruses using commercial ELISA kits, and the circulating strains of SwIV were identified by the hemagglutination inhibition test (HIT). Antibodies against SwIV were detected in 114 out of the 309 samples (37%). Out of a total of 26 farms, 14 tested positive for SwIV antibodies. HI testing revealed high titers against the A/sw/Minnesota/593/99 H3N2 strain and the pH1N1 2009 pandemic strain. Antibodies against PPV were detected in 87 out of the 309 samples (28%), with 11 out of 26 farms testing positive for PPV antibodies. Antibodies against PCV-2 were detected in 205 out of the 309 samples tested (66%), with 25 out of the 26 farms testing positive for PCV-2 antibodies. No antibodies were detected in any of the tested pigs to PRRSV, TGEV, PRCV, or CSFV.     

广东省猪PCV-2感染的调查

2005年-2006年,对广东省12个市（县／区）共40个猪场108头病例,应用病理学及病原检测方法对PCV-2感染情况进行调查。结果表明,PCV-2阳性44例,占总病例数的40．7％。从,10日龄到120日龄均有感染,以60日龄～70日龄多发。在PCV-2感染的病例中,混合感染占95．5％。以混合感染PRRSV（11例,25％）最多,混合感染APP次之（10例,22．7％）。另外,调查显示该病可全年发生,但5月份为发病高峰。     

广西德保县黑猪主要疫病病原学和血清学检测

为了解德保黑猪主要疫病流行状况和免疫效果,2018—2020年采集166个德保黑猪饲养场点的300份病死猪样品进行非洲猪瘟(ASF)、猪瘟(CSF)、口蹄疫(FMD)、猪繁殖与呼吸综合征(PRRS)、猪伪狂犬病(PR)、猪圆环病毒病(PCV-2)、猪支原体病(PPLO)、猪传染性胸膜肺炎(PCP)、猪链球菌病(SS)、猪流行性腹泻(PED)、猪传染性胃肠炎(TGE)等11种主要疫病的病原学检测,2017—2020年采集35个场点的临床健康德保黑猪血清样品840份进行FMD、CSF、PRRS抗体检测。结果显示:PCV-2样品平均阳性检出率为68.3%,PRRS、PR、PED、PPLO、SS等疫病的病原阳性检出率分别为1.7%、1.0%、1.0%、0.3%、0.3%;CSF平均抗体阳性率为95.8%,而FMD、PRRS平均抗体阳性率较低,分别为79.3%、73.2%,且各年份变化较大。结果表明,德保黑猪主要疫病防控效果较好,大部分疫病得到有效控制,但PCV-2感染仍较严重,这是导致德保黑猪发病死亡以及FMD、PRRS免疫效果不佳的主要因素之一,需要重点加强控制。     

广东省猪PCV-2感染的病原学调查

2004年-2006年从广东省4个不同地区458个规模化猪场采集2128份病料,进行了PCV-2的抗原检测,结果表明,被检地区的猪群中普遍存在PCV-2感染,检测的458个规模化猪场中有372个猪场有PCV-2阳性猪,平均阳性率达到81．22%;2128份被检病料样品中有863份为阳性,平均阳性率达40．55％（863／2128）;不同地区不同时段猪场阳性率为63．64％～92．86％,病料样品的阳性率为24．00%～48．00％。     

青海省部分地区猪圆环病毒2型感染的血清学调查

应用猪圆环病毒2型抗体酶联免疫检测试剂盒,测定了青海省省内8个猪场的1 000个血清样本,对不同地区、不同年龄猪的进行了血清学调查.结果显示,青海省8个猪场均有猪圆环病毒2型( PCV-2)感染,全省猪的PCV-2感染的平均血清阳性率为25.9％,其中母猪、种公猪、生长育肥猪、保育猪及哺乳仔猪抗体阳性率分别35.3％、...     

上海市规模化猪场猪圆环病毒2型血清学调查

为了解和掌握上海市PCV-2的感染情况,2003年-2005年对上海市猪群PCV-2的感染情况进行了血清学调查。用间接酶联免疫吸附试验,对上海市9个规模化猪场的768份血样进行了PCV-2抗体检测。被检猪场均有PCV-2抗体阳性,而且在2005年有明显增加的趋势。     

利用宏基因组学鉴定藏猪腹泻粪便病毒种群

为进一步了解藏猪腹泻粪便中病毒种群，从青藏高原地区16个藏猪场采集腹泻粪便样本146份，将样本混合成一个pool样，提取RNA反转录成cDNA，建库后利用TruSeq Illumina测序，对测序的序列进行整理分析及相关病毒的分子特征进行研究。数据分析结果表明：藏猪腹泻粪便样本病毒种群包括11个病毒科的19种病毒，主要以线性和环状的小DNA病毒为主，如猪粪相关环状病毒7型、猪腺病毒和猪博卡病毒（PBoV）等；与腹泻相关的病原有猪流行性腹泻病毒（PEDV）、猪圆环病毒2型（PCV-2）和牛病毒性腹泻病毒1型（BVDV-1）3种；与腹泻相关的新发病原有porcine bufavirus、rabovirus和pasivirus 3种。利用SOAP软件组装出猪细小病毒6型（PPV-6）、PCV-2、PBoV-2完整或接近全长的基因组和戊型肝炎病毒（HEV）完整的ORF2基因序列，系统发育结果显示PPV-6和PCV-2与参考毒株有较近的遗传进化关系，PBoV-2与参考毒株有较远的遗传进化关系，单独聚为一簇，可能是一个全新的基因型。为进一步调查PCV-2在藏猪腹泻粪便中的检出率，对采集146份样本进行检测，检出率为10.96%（16/146，95% CI：6.4%~17.2%），且与四川地区PCV-2流行株有较近的亲缘关系。本研究发现藏猪腹泻粪便中病毒种类复杂多样，且可能存在与其他动物和人交叉感染情况，具有重要的公共卫生学意义，也为藏猪腹泻病防控提供一定的理论依据。     

我国部分地区猪圆环病毒2型和猪细环病毒混合感染的调查

为了解猪圆环病毒2型(PCV-2)和猪细环病毒(TTV)混合感染情况,用PCR方法对来自湖南、江西、广东、福建和广西五省区的193份猪组织样品进行PCV-2、TTV-1和TTV-2进行检测。结果显示,PCV-2感染率为61.1%(118/193),PCV-2和TTV-1混合感染率为32.1%(62/193),PCV-2和TTV-2混合感染率为16.9%(32/193),3种病原混合感染率为9.8%(19/193),2006年PCV-2和TTV的混合感染率最高。由此可见,目前猪群中存在PCV-2和猪TTV的混合感染,PCV-2和TTV-1型混合感染率高于和TTV-2型的混合感染率,且存在一定比例的三重感染情况。     

猪细环病毒的检测及与多种病原混合感染的调查分析

为了解细环病毒(Torque teno virus,TTV)在广西猪群中的感染情况,本研究运用Nest-PCR方法,对2009—2011年采自广西140个规模猪场的156份血液、流产胎儿及肺脏、脾脏、肾脏、肝脏、淋巴结等组织样品进行检测,并对阳性样品的非编码区(UTR)进行克隆测序及遗传进化分析;同时对部分样品进行猪圆环病毒2型(PCV2)、猪繁殖与呼吸综合征病毒(PRRSV)、典型猪瘟病毒(CSFV)、伪狂犬病病毒(PRV)检测及细菌的分离鉴定。结果发现,广西猪群中TTV总感染率达到93.6%,TTV2的感染率(76.9%)不仅明显高于TTV1(16.7%),且毒株间遗传变异较大。TTV多与PCV2和PRRSV混合感染,且以与PRRSV混合感染率更高(64.29%)。猪群中存在2重、3重,甚至4重TTV与其他病毒的混合感染。临床上TTV与细菌的混合感染(或细菌继发感染)以链球菌和副猪嗜血杆菌多见。本研究证实在广西猪群中存在TTV感染,且存在普遍的TTV与PRRSV、PCV2和CSFV混合感染。     

2010年国内部分省份猪场常见病毒性疾病的病原学调查

随着规模化养猪业的发展,传染性疾病越来越多,混合感染或多重感染十分普遍,给疾病的诊断和预防带来很大困难。本文将我们实验室2010年分别采自福建、广西、河南、上海、内蒙、浙江、江苏和山西等地发病猪场的185份病料,通过RT-PCR和PCR方法对其进行猪繁殖与呼吸综合征病毒（Porcine reproductive and respiratory syndrome virus,PRRSV）、猪繁殖障碍的猪瘟病毒（Classical swine fever virus,CSFV）、猪圆环病毒2（Porcine circovirus type 2,PCV2）、猪细小病毒（Porcine parvovirus,PPV）、猪伪狂犬病毒（Pseudorabies virus,PRV）、细环病毒2（Torque teno virus 2,TTV2）等病毒检测。结果表明在所检的病料中PRRSV、PCV2和TTV2的阳性率比较高,分别为49.2%、62.2%和95.1%。有些地方TTV2的阳性率高达100%;同时,还存在很普遍的PRRSV与PCV2、PRRSV与TTV2、PCV2与TTV2等混合感染,混合感染率分别为27.6%、45.4%、58.4%;以及PRRSV、PCV2与TTV2的三重感染率为24.9%。同时对部分PRRSV阳性病料的PRRSV GP5和nsp2基因分别进行测序,分析测序结果表明病料中的PRRSV的GP5和nsp2序列与PRRSV HuN4株的相应序列的亲缘关系分别在98.2%和96.2%以上,且在nsp2区域都存在30个不连续氨基酸的缺失,说明现在临床中所流行的PRRSV可能仍是与高致病性PRRSV基因型相似的病毒。通过本文可以及时了解当前养猪场的病毒性疾病的流行情况,为猪场病毒性疾病的防控提供依据。     

采用PCR方法对猪场猪瘟病毒、猪繁殖障碍与呼吸道综合征病毒、猪圆环病毒2型混合感染的诊断研究

采用猪瘟-猪繁殖障碍与呼吸道综合征病毒(CSFV-PRRSV)多重PCR诊断试剂盒和猪圆环病毒2 型(PCV 2)PCR诊断试剂盒对来自河南省不同地区的6个规模猪场送检的60份临床疑似病料进行了病原学PCR检测。结果表明：60份样品中CSFV、PRRSV、PCV-2感染的阳性率分别为38.3%、30%和43.3%；3种病毒共感染样品数目占所有样品的13.3%，CSFV PCV-2双感染的比例最高，达到31.7%，PRRSV-PCV-2双感染比例为18.3%，而CSFV-PRRSV双感染比例只有15%。自感染猪内脏器官和血清中均能成功检测出病毒。本研究结果表明PCR诊断可作为临床上这3种病的病原学快速、灵敏的诊断方法，并为猪场猪瘟、猪繁殖障碍与呼吸道综合征、猪圆环病毒2型3种病的流行病学和检测方法的研究奠定了一定的基础。     

Evaluation of a nested polymerase chain reaction assay to differentiate between two genotypes of Porcine circovirus-2.

Porcine circovirus-2 (PCV-2) is associated with several diseases in pigs, including postweaning multisystemic wasting syndrome (PMWS). A new genotype of PCV-2 was isolated from swine farms with and without clinical PMWS in North America. The new genotype was differentiated in a separate cluster by phylogenetic analyses and is now named PCV-2b compared with PCV-2a for the previously known genotype. The purpose of this study was to develop and evaluate a nested polymerase chain reaction (nPCR) assay to detect and differentiate between PCV-2a and PCV-2b. Genotype-specific primer sets were designed by using sequence data published for different PCV-2 strains. Specificity and sensitivity of the nPCR were examined by using PCV-2 isolates with known genotype. Nested PCR was found to be highly specific and sensitive for detecting and differentiating between the PCV-2 genotypes compared with the conventional 1-step PCR assay. Nested PCR was applied to detect PCV-2 and to identify the genotype in serum samples from swine farms with and without a clinical history of PMWS. Of 60 serum samples collected from 4 farms during clinical PMWS outbreaks, PCV-2a and PCV-2b were detected in 6 and 49 samples, respectively. Six of the 10 samples from one of the 4 farms had both PCV-2a and PCV-2b. Of 20 serum samples from 2 farms without PMWS, 11 were positive for PCV-2a only. These results suggest that the differential nPCR can be used to detect PCV-2 and to differentiate the 2 genotypes from field samples.     

对青岛地区4个猪场的猪细环病毒II型的分子流行病学调查

为了解青岛地区各猪场中猪细环病毒II型（TTV2）的存在和感染情况,本实验对2012年3月至5月期间采自青岛地区4个猪场的59份猪血清样品利用病毒核酸提取试剂盒进行了猪细环病毒DNA提取,在此基础上利用TTv2的特异性引物进行PCR检测。结果显示只有莱西1个猪场的血清样品中检测到阳性,阳性率为13．8％,并且存在TTV1与TTV2混合感染的情况,混合感染率为6．9％。本实验结果证实某些猪场中存在猪细环病毒感染,由于TTV在猪的多系统衰竭综合征的病症发展中可能扮演一定角色,所以了解TTV在猪场中的存在状况具有重要意义。     

Efficient surveillance of pig populations using oral fluids

Currently virus surveillance in swine herds is constrained by the cost-effectiveness and efficiency of sampling methods. The objective of this study was to assess the value of using oral fluids collected by barn personnel as a method of surveillance based on PCR testing. Approximately 12,150 pigs in 10 wean-to-finish barns on 10 farms were monitored for the presence of porcine circovirus type 2 (PCV2), porcine reproductive and respiratory syndrome virus (PRRSV), influenza A virus (IAV), and Torque teno virus genogroups 1 (TTV1) and 2 (TTV2) by sampling oral fluid specimens. Oral fluid samples were collected from 6 pens at each site starting at the time of pig placement (～3 weeks of age) and continuing thereafter at 2-week intervals for a period of 18 weeks. Data were analyzed both on a pen basis and barn basis. Overall, 508 (85%) samples were positive for PCV2, 73 (12%) for PRRSV, 46 (8%) for IAV, 483 (81%) for TTV2, and 155 (26%) for TTV1 during the study period. The estimated arithmetic means of the quantitative PCR-positive oral fluids for PCV2, PRRSV, and IAV were 1×10(4.62), 1×10(4.97), and 1×10(5.49)per ml. With a single exception, all barns were positive for PCV2 and TTV2 at every sampling point in the study. Virus detection varied among barns, particularly for IAV and PRRSV. The pen level, cumulative distribution of agent combinations between all 10 barns were statistically different. The most commonly observed patterns were PCV2+TTV2 (239 pen samples, 40%), PCV2+TTV1+TTV2 (88 pen samples, 15%), and PCV2 alone (66 pen samples, 11%). This "proof-of-concept" project showed that a variety of viruses could be detected either intermittently or continuously in pig populations and demonstrated that barn herd virus status is highly variable, even among barns in the same production system. Oral fluid sampling is a promising approach for increasing the efficiency and cost effectiveness of virus surveillance in swine herds.     

山东种公猪精液携带主要病原的检测

采用PCR技术,对2007年-2009年山东部分地区的38个猪场和人工授精站的生产公猪精液样品727份进行了猪瘟病毒(CSFV)、猪繁殖与呼吸综合征病毒(PRRSV)、伪狂犬病病毒(PRV)、猪圆环病毒2型(PCV-2)和猪细小病毒(PPV)5种主要病原的检测。结果检出CSFV、PRRSV、PRV、PCV-2和PPV的阳性数和阳性率分别为18份(2.48%)、27份(3.71%)、7份(0.96%)、33份(4.54%)、9份(1.24%),有7份样品为2种以上病原混合感染,其中以PRRSV+PCV-2混合感染最多。结果表明精液传播病毒仍是当前母猪繁殖障碍的重要原因之一,应重点加强对种公猪的疫病净化和公猪精液管理,从源头控制传染源。     

华东地区PMWS患病猪群PCV-2的检测及其基因特征

用 PCR方法 ,对江苏、上海、山东、江西、安徽和浙江等省市 6 5家猪场 99例断奶仔猪多系统衰弱综合征(PMWS)肺脏和淋巴结病料 ,进行了猪圆环病毒 - 2 (PCV- 2 )基因检测 ,发现其中 18家猪场 2 1例病料为 PCV- 2阳性。源自安徽和上海的 PCV- 2分离株经基因序列分析显示 ,2个分离株部分 ORF2 与国外分离毒株同源性为 92 %～99%。安徽分离株 AHHF6与韩国分离株 KSY- 1同源性为 99% ,而上海分离株 SHHT1与加拿大分离株 Imp.114 7同源性为 98%。上述结果表明 ,我国 PMWS患病猪群广泛存在 PCV- 2 ,不同地区 PCV- 2存在一定基因差异 ,它们可能来源于不同国家或地区     

上海及周边地区猪圆环病毒2型基因型分析

采集上海及周边地区猪内脏样本,进行猪圆环病毒2型（Porcine circovirus type 2,PCV-2）病原学检测,并对阳性样本的ORF2序列进行分析和比对。结果显示,发病猪群PCV-2阳性率为39.06%（25/64）,健康猪群阳性率为13.51%（5/37）,PCV-2总阳性率为29.70%（30/101）。30份阳性样本中PCV-2a亚型为2株,检出率为1.98%（2/101）,其余28株均为PCV-2b亚型,检出率为27.72%（28/101）。PCV-2的ORF2序列与已登录的ORF2序列的同源性在90.7%~100%。2株PCV-2a株相互间的同源性为99.6%;28株PCV-2b株的同源性在94.4%~100%,PCV-2b株中只有4株与已登录株DQ141322、AY321984和AY484413株同源性关系最近,处于同一分支中,而另外24株与Q151643中国株同源性关系最近且处于同一分支中。研究结果表明上海及周边地区PCV-2感染比较普遍,发病猪场的感染率远高于健康猪场,且感染率比往年有升高,PCV-2在猪场疫病的爆发和传染中起着重要的协同作用;在PCV-2的感染病例中,PCV-2b亚型为感染的优势毒株;绝大多数PCV-2b ORF2片段的同源性与已登录的一株中国株同源性关系密切,在基因进化树上处于同一分支,但是否可以推断其为PCV-2的另一个亚型有待进一步考证。     

Porcine circovirus-2 DNA concentration distinguishes wasting from nonwasting pigs and is correlated with lesion distribution, severity, and nucleocapsid staining intensity.

The emergence of severe porcine circoviral disease in North America is associated with Porcine circovirus-2 genotype b (PCV-2b), which has led to speculation that PCV-2b is more virulent than PCV-2a. The objectives of this study were to 1) correlate the PCV-2 DNA concentration and lesions in wasting (WST) and age-matched healthy (HLTH) pigs from 2 clinically affected farms, and unaffected (UNFCT) pigs from a farm with no prior clinical or diagnostic history of PCVD; and 2) to determine the initial estimates of sensitivity and specificity of PCV-2 quantitative polymerase chain reaction (qPCR). PCV-2b was confirmed in all 3 farms. Compared with HLTH pigs, WST pigs demonstrated significantly more prevalent thymic atrophy, failure of normal pulmonary collapse, and ascites (P < 0.017 for all). The HLTH and UNFCT pigs had significantly more pronounced lymphoid germinal centers and proliferative paracortical T-dependent zones, compared with WST pigs (P < 0.017). Across all tissues, PCV-2 DNA concentrations were significantly higher in WST compared with HLTH and UNFCT pigs (P < 0.017 for all). The PCV-2 DNA concentrations were strongly correlated with PCV-2 nucleocapsid staining intensity in lymph node, spleen, Peyer's patches, lung, liver, and kidney (0.60 < or = r < or = 0.84). In the current study, the PCV-2 DNA log10 cutoff concentrations best able to distinguish WST from HLTH and UNFCT pigs were between 7.0 and 8.0 per gram for tissues, and between 4.0 and 5.0 per milliliter for sera. The presence of PCV-2b in UNFCT pigs is evidence that PCV-2b by itself is not sufficient to induce severe disease.