矮脚黄鸡、兴义矮脚鸡血清蛋白多态性的比较研究

利用聚丙烯酰胺凝胶梯度电泳对贵州矮脚黄鸡、兴义矮脚鸡的血清前白蛋白(Pa)、白蛋白(Alb)、后白蛋白(Po)、运铁蛋白(Tf—1,Tf—2)5个位点多态性进行检测。结果表明:除Pa位点在矮脚黄鸡表现为单态,在兴义矮脚鸡表现为多态外,其它4个血清蛋白位点在两鸡种均具多态性,诸位点分别受2～3个(复)等位基因控制。Hardy-Weinberg平衡状态检测结果表明,两群体的Tf—1、Tf—2位点基因型频率都偏离了Hardy-Weinberg平衡状态。兴义矮脚鸡的有效等位基因数和期望杂合度(1.8792,0.4539)较大,矮脚黄鸡(1.7538,0.3772)较小,表明兴义矮脚鸡较矮脚黄鸡的遗传变异度大。     

贵州兴义矮脚鸡遗传方式研究

本文对兴义矮脚鸡矮脚性状遗传方式进行了研究,结果表明:兴义矮脚鸡自交F1代中只出现矮脚和高脚两个性状,其分离比例接近2:1,经卡方检验.P>0.05,F1代观测数与期望数差异不显著,这是经典的孟德尔3:1比数的变异型.为了进一步确定其遗传方式,利用兴义鸡中高脚和矮脚进行正反交和高脚的自交.结果显示:正反交结果一致,矮脚、高脚的分离比接近于1:1.兴义矮脚鸡中的高脚自交F1代中全部为高脚.孵化过程中出现早期胚胎规律性死亡现象,我们对兴义矮脚鸡胚胎死亡时间和早期死亡率进行统计分析,结果显示:兴义矮脚鸡胚胎死亡时间主要集中在48～72h.早期胚胎死亡率平均达到24.3%,接近25%(P≥0.05).比较兴义鸡分离系矮脚鸡和高脚鸡0～12周龄胫长和体重变化,矮脚鸡胫长、体重显著低于高脚鸡(P<0.05).     

矮脚黄鸡、兴义矮脚鸡血清蛋白多态性的比较研究

利用聚丙烯酰胺凝胶梯度电泳对贵州矮脚黄鸡、兴义矮脚鸡的血清前白蛋白(Pa)、白蛋白(Alb)、后白蛋白(Po)、运铁蛋白(Tf-1,Tf-2)5个位点多态性进行检测.结果表明:除Pa位点在矮脚黄鸡表现为单态,在兴义矮脚鸡表现为多态外,其它4个血清蛋白位点在两鸡种均具多态性,诸位点分别受2～3个(复)等位基因控制.Hardy-Weinberg平衡状态检测结果表明,两群体的Tf-1、Tf-2位点基因型频率都偏离了Hardy-Weinberg平衡状态.兴义矮脚鸡的有效等位基因数和期望杂合度(1.8792,0.4539)较大,矮脚黄鸡(1.7538,0.3772)较小,表明兴义矮脚鸡较矮脚黄鸡的遗传变异度大.     

利用微卫星标记分析贵州地方鸡种的遗传多样性及亲缘关系

利用7个微卫星标记对12个贵州地方鸡种及1个引入鸡种的遗传多样性进行了检测，分析了各标记座位上的等位基因及频率、基因杂合度、平均基因杂合度、多态信息含量、平均多态信息含量及群体间的亲缘关系。结果表明：13个种群在7个标记座位上的等位基因及频率等均存在一定差异。其中，瑶山鸡的平均基因杂合度最高，引入鸡种隐性白洛克的平均基因杂合度最低，其余鸡种介于其间。平均多态信息含量的分析结果与此类似，说明瑶山鸡的遗传多样性最为丰富。模糊聚类的结果表明，13个鸡种分为2大类群，隐性白洛克独自为1个类群，12个贵州地方鸡种构成1个类群。12个贵州地方鸡种又可进一步分为2个小类群：其中1个小类群由兴义土鸡、矮脚鸡首先聚在一起，然后依次聚上黔东南小香鸡、黔东南小香乌骨鸡构成；高脚鸡、瑶山鸡、威宁鸡、竹乡鸡、竹乡乌骨鸡、黑羽乌蒙乌骨鸡、乌蒙鸡、麻羽乌蒙乌骨鸡则构成另一个小类群。     

固始鸡不同品系及部分外来鸡种遗传多样性的微卫星分析

利用10个微卫星标记,对固始鸡5个系和4个非固始鸡品系共9个群体的等位基因频率、遗传杂合度、群体间的遗传距离等进行了分析,并根据遗传距离进行了聚类分析。结果表明:星红褐鸡与绿壳蛋鸡被聚为一类,固始鸡慢羽系与快羽系被聚为一类,固始鸡被聚为一大类,罗曼鸡自成一类,艾维茵鸡也自成一类。     

脂肪型脂肪酸结合蛋白基因多态性与鸡肉品质性状的关系研究

采用PCR-SSCP技术分析了A-FABP基因在北京油鸡、矮脚鸡、泰和乌骨鸡、崇仁麻鸡、鹿苑鸡、霞烟鸡等6个地方品种鸡和AA肉鸡中的多态性,发现的3个多态位点的基因型频率和等位基因频率在不同品种之间存在显著差异。测序分析表明：多态位点的产生分别是由碱基C→T、G→A以及C→T的变异引起的。在北京油鸡、矮脚鸡群体中对各多态位点不同基因型与体重、肌内脂肪、腹脂率等脂肪相关性状进行关联分析,结果显示不同基因型间在部分肉品质相关性状上差异显著。     

应用微卫星标记对12个中国地方乌骨鸡品种遗传多样性的研究

利用27个微卫星DNA标记对12个地方乌骨鸡品种进行遗传多样性分析，通过计算等位基因频率、多态信息含量、杂合度、有效等位基因数和遗传距离，评估各品种内遗传变异和各品种间遗传相关，并根据遗传距离对12个鸡品种进行了聚类分析。结果表明，各乌骨鸡群体的遗传多样性较为丰富，并具有较高的选择潜力。平均杂合度最高的是竹乡鸡，为0．670；最低的是江山乌骨鸡，为0．581。27个微卫星标记中4个为中度多态座位，1个低度多态座位，22个为高度多态座位；LEI0234与LEI0192分别检测到了10．3与12．2个等位基因。以标准遗传距离为准，遗传距离最近的为沐川乌骨鸡与略阳鸡，为0．1002，而乌蒙乌骨鸡与略阳鸡最远，为0．2546。通过UPG—MA法聚类后，略阳鸡、沐川乌骨鸡、兴文乌骨鸡、盐津乌骨鸡、竹乡鸡首先聚为1类，江山乌骨鸡、郧阳白羽乌鸡、余干乌骨鸡聚为1类；金湖乌凤鸡、丝绒乌骨鸡和丝毛乌骨鸡聚为第3类；乌蒙乌骨鸡独为一类。     

利用微卫星标记分析江苏三个地方鸡品种的遗传多样性

利用30个微卫星DNA标记对3个江苏地方鸡品种进行遗传多样性分析，通过计算等位基因频率、多态信息含量、平均杂合度、有效等位基因数和遗传距离，评估各品种内遗传变异和各品种间遗传相关。结果表明：江苏的3个品种在30个微卫星上共发现196个等位基因，其中96个等位基因为三个品种共有，47个等位基因为各品种所特有；3个地方鸡品种的平均杂合度：狼山鸡为0．655，鹿苑鸡为0．681，溧阳鸡为0．687；狼山鸡与溧阳鸡的遗传距离较小，而两鸡与鹿苑鸡的遗传距离较远。     

五个品种(系)鸡的RAPD亲缘关系分析

本试验用DNA池法从40条随机引物中筛选出29条多态性、重复性好的引物,对贵州黄鸡、兴黔黄鸡、乌骨鸡三个培育品种(系)和地方品种兴义矮脚鸡及引进选育品种矮脚黄鸡共五个品种(系)进行随机扩增多态亲缘关系分析。结果表明,29条引物共扩增出稳定、清晰、重复性好的条带190条,其中多态性片段127条,在300bp￣3000bp之间。单个引物扩增出的RAPD条带在4￣13条之间,平均为6.55条。五个品种(系)间的亲缘关系符合它们的育种背景[1,2,3]。     

四个家鸡群体血液蛋白质多态性分析

本实验采用醋酸纤维薄膜电泳和聚丙烯酰胺凝胶电泳方法测定了新兴黄鸡，矮脚鸡，竹丝鸡，粤黄鸡麻羽系血液蛋白质多态性，观察了以上群体多态性血液蛋白质基因频率的区别，根据基因频率计算出４个群体的平均杂合度，用主分量分析方法对它们之间的区别与联系进行了研究。主要分析表明竹丝鸡与新兴黄鸡的关系相对新兴鸡与矮脚鸡，竹丝鸡与矮脚鸡之间的关系更为疏远：矮脚鸡则与粤黄鸡麻羽系关系密切。     

Blood protein polymorphisms in native chicken breeds in Yunnan province of China

Blood samples were collected from four native breeds (Chahua chicken, Xishuangbanna Game chicken, Wuding chicken, and Yangbi Huang chicken) in the Yunnan province of China, and their protein polymorphisms were analyzed by using electrophoresies. Out of 16 loci examined, polymorphisms were found in the following eight loci: plasma esterase, plasma amylase, plasma alkaline phosphatase, plasma albumin, plasma transferrin, plasma postalbumin, and hemoglobin. The other eight loci, erythrocyte lactate dehydrogenase, erythrocyte 6‐phosphogluconate dehydrogenase, erythrocyte phosphoglucomutase, erythrocyte phosphohexose isomerase, erythrocyte tetrazolium oxidase, erythrocyte malate dehydrogenase, erythrocyte esterase and hemoglobin, were monomorphic. The proportion of the polymorphic loci and the expected average heterozygosity were estimated as 0.438–0.500 and 0.141–0.174, respectively. A dendrogram was drawn according to the genetic distance, which was calculated by the Nei's genetic distance matrix, among four Chinese native breeds. The results indicated that Chahua, Wuding and Yangbi Huang chickens were genetically remote from Xishuangbanna Game chicken. Moreover, the genetic distance was calculated among the Sri Lankan, Bangladeshi and Nepalese native fowl populations, and another dendrogram was constructed. In the latter dendrogram, Chahua, Wuding and Yangbi Huang chickens were genetically closer to Sri Lankan and Bangladeshi native fowls than Xishuangbanna Game chicken.     

四川常羽乌骨鸡群体遗传多样性分析

利用选自家禽基因组的10个微卫星标记,对四川常羽乌骨鸡5个群体(四川山地乌骨鸡白羽系、黑羽系;黄忠山地乌骨鸡;黄忠山地乌骨鸡绿壳蛋系;草科乌骨鸡)的遗传多样性进行了检测,计算了各群体的群体杂合度、群体间遗传距离,并根据遗传距离进行了聚类分析。结果表明所选择的微卫星标记在各群体中表现出较高的多态性;四川5个乌骨鸡群体遗传多样性比较丰富,群体平均杂合度为0.5383到0.6659;各群体间的遗传距离有一定的差异;聚类分析将5个群体聚为三类。     

基于全基因组SNP标记分析中国地方鸡品种的遗传多样性和种群结构

旨在对中国地方鸡品种的遗传多样性与种群结构进行分析。本研究使用Affymetrix Axiom 600K高密度鸡基因分型芯片对来自8个品种的157只地方鸡及233只商品鸡进行基因分型,以品种作为分组来计算各分组的观测杂合度、期望杂合度、次等位基因频率、近交系数及核苷酸多样性分析地方鸡群体的遗传多样性,利用进化树、主成分分析、群体结构、MDS等方法分析鸡群体的群体结构,基于状态同源(IBS)和群体分化系数(Fst)分析种群内部与种群之间的亲缘关系,利用长纯合片段(runs of homozygosity, ROH)估算得到基于ROH的近交系数。结果表明,各群体的观测杂合度均高于期望杂合度,次等位基因频率在0.175～0.236之间,近交系数在0.018～0.205之间,核苷酸多样性在0～6×10^-4之间,进化树与主成分分析表明品种间出现了明显的群体分化,地方鸡群体与商品鸡群的MDS分析发现我国地方鸡与商业肉鸡品种的遗传距离较近;IBS遗传距离在0.092 9～0.319 9之间;各品种成对Fst分析表明,群体间呈现中高分化程度(0.09～0.22);此次分析共得到了...     

藏鸡和茶花鸡染色体G带比较

运用改进的鸡外周血淋巴细胞培养-空气干燥法,分析了藏鸡和茶花鸡染色体G带。G带研究结果表明：2个地方鸡种的染色体G带带纹存在一定差异,主要体现在带纹数目的差异和带纹宽度的差异,藏鸡前10对大型染色体可分为33个区,共149条带,而茶花鸡可分为34个区,共146条带;同时对2个地方鸡种G带带型特征进行详细比较,并绘制了G带模式图。     

New alleles of chicken CD8 alpha and CD3d found in Chinese native and western breeds

Chinese native chicken breeds provide useful resources for the study of genetic diversity. In this study, the alleles of CD8 alpha and CD3d cDNA from Chinese native and introduced western breeds of chicken were analyzed at the sequence level. Six alleles were found, due to 13 amino acid replacements in the extracellular domain of the CD8 alpha sequence. There were four alleles detected in the Chinese strains, and alleles 5 and 6 were identified for the first time. Allele 6 was shared by Langshan, Beijing Fatty and Recessive White Feather chickens. Allele 2, found in the Bigbone strain, was the same as that found in the Leghorn strain H.B15.H7, and allele 3 in the Xianju breed was also the same as in the Leghorn strain H.B15.H12. Two Leghorn lines (RPL line 7 and AY519197) and the Camellia possessed an allele (alleles 1, 4 and 5), respectively, that was not found in the other lines. Nine out of 13 amino acid replacements were situated in the putative major histocompatibility complex (MHC) class I binding CDR1 (positions 30, 33 and 34), CDR2 (positions 58, 62, 63 and 65) and CDR3 (positions 90 and 106). Except for the Xianju breed, the CD8 alpha cDNA of Chinese native chicken breeds shared high homology. Two alleles were found in CD3d. Three additional nucleotides were found at positions 64, 65 and 66 in the newly discovered allele 2. This led to a difference of four amino acids (at residues 22, 23, 24 and 25) in the extracellular domain of CD3d cDNA from the Gushi, Recessive White Feather and ISA chickens compared with these of the White Leghorn and T11.15 (NM_205512). Five hybridoma clones (1C9, 1H5, 4B11, 6G5 and 13C5) against chicken CD8 alpha were generated by DNA immunization. Two monoclonal antibodies (mAbs), 6G5 and 4B11, showed reactivity to the splenocytes from five Chinese native chicken breeds, the Recessive White Feather chicken and the Leghorn (AY519197), while mAbs 1C9, 1H5 and 13C5 showed no reaction with these breeds.     

新昌宫廷黄鸡遗传多样性及遗传结构分析

为研究新昌宫廷黄鸡的遗传多样性及遗传结构,本实验利用STR分型技术对新昌宫廷黄鸡在26个微卫星位点上的遗传多样性进行检测,并分析其与仙居鸡、萧山鸡、龙游麻鸡、丝羽乌骨鸡和白耳黄鸡的遗传距离。结果显示:新昌宫廷黄鸡平均有效等位基因数为4.03个,多态信息含量变幅为0.41～0.85,平均为0.67,观察杂合度平均为0.60,期望杂合度平均为0.72,Shannon信息指数平均为1.50,表明宫廷黄鸡26个遗传位点具有高度多态性,即该群体具有较高的遗传多样性;基于遗传距离NJ系统进化树将6个不同群体聚为两大簇,其中白耳黄鸡单独成一簇,其他5个品种聚为一簇,与宫廷黄鸡遗传距离从小到大依次为丝羽乌骨鸡、龙游麻鸡、萧山鸡、仙居鸡、白耳黄鸡,基于FCA分析结果与遗传距离NJ系统进化树结果一致。     

Effects of chemically or virus-induced immunodepression on response of chickens to avian leukosis virus

The effects of chemically or virus-induced immunodepression on the infection profile (development of viremia and antibody) and shedding of avian leukosis virus (ALV) were studied in progeny chickens of experimental or commercial breeder flocks. Chickens were infected with ALV subgroup A by contact at hatching and by oral inoculation at 4-5 weeks of age. In the first experiment, chickens were inoculated with a virulent strain of infectious bursal disease virus (IBDV) at 1 day or 6 weeks of age. In the second experiment, chickens were neonatally treated with cyclophosphamide (CY), or were inoculated with strain T of reticuloendotheliosis virus (REV) at hatching, or were inoculated with strain JM of Marek's disease virus (MDV) at 2 weeks of age. The infection profile and cloacal shedding of ALV in chickens exposed to ALV and inoculated with immunodepressive viruses or CY were compared with those in hatchmates exposed only to ALV. In two of four chicken lines tested in the first experiment, shedding of ALV, as determined by virological assays of cloacal swabs at 22 weeks of age, was significantly higher in chickens infected with IBDV at 1 day of age than in uninfected hatchmates. The rate of shedding of ALV in one of these two lines was also significantly higher in chickens infected with IBDV at 6 weeks of age than in uninfected chickens. Further, the frequency of ALV-antibody detection at 22 weeks of age was significantly lower in chickens of these two lines infected with IBDV at 1 day of age than in uninfected chickens. In the second experiment, neonatal treatment with CY significantly increased the frequency of viremic chickens of both experimental and commercial flocks. The frequency of ALV-viremic chickens at 22 weeks of age was considerably higher in the REV- and MDV-inoculated groups (54% and 44%, respectively) than in control hatchmates (29%), but only in chickens of the commercial line. These findings suggest that chemically or virus-induced immunodepression may lead to an increase in rates of viremia and shedding of ALV in chickens infected with virus after hatching, especially in certain genetic lines.     

Response of white leghorn chickens of various genetic lines to infection with avian leukosis virus subgroup J

In Experiment 1, chickens from various white leghorn experimental lines were inoculated with strain ADOL-Hcl of subgroup J avian leukosis virus (ALV-J) either as embryos or at 1 day of age. At various ages, chickens were tested for ALV-J induced viremia, antibody, and packed cell volume (PCV). Also, at 4 and 10 wk of age, bursal tissues were examined for avian leukosis virus (ALV)-induced preneoplastic lesions with the methyl green-pyronine (MGP) stain. In Experiment 2, chickens harboring or lacking endogenous virus 21 (EV21) were inoculated with strain ADOL-Hcl of ALV-J at hatch. All embryo-inoculated chickens in Experiment 1 tested positive for ALV-J and lacked antibody throughout the experimental period of 30 wk and were considered viremic tolerant, regardless of line of chickens. By 10 wk of age, the incidence of ALV-J viremia in chickens inoculated with virus at hatch varied from 0 (line 0 chickens) to 97% (line 1515); no influence of ALV-J infection was noted on PCV. Results from microscopic examination of MGP-stained bursal tissues indicate that ALV-J can induce typical ALV-induced transformation in bursal follicles of white leghorn chickens. Lymphoid leukosis and hemangiomas were the most common ALV-J-induced tumors noted in chickens in Experiment 1. At termination of Experiment 2 (31 wk of age), 54% of chickens harboring EV21 were viremic tolerant compared with 5% of chickens lacking EV21 after inoculation with ALV-J at hatch. The data indicate that genetic differences among lines of white leghorn chickens, including the presence or absence of EV21, can influence response of chickens to infection with ALV-J.     

地方鸡种与隐性白羽鸡遗传变异的AFLP指纹

利用6对AFLP引物组合对我国12个地方鸡种和引进鸡种隐性白羽鸡进行了遗传检测,统计了每个引物组合在各个品种中检测到的多态性条带和特异性条带,计算了13个鸡种的遗传相似系数和遗传距离,并据此构建了UPGMA聚类关系图,分析了所研究鸡种的遗传关系.结果表明:6对AFLP引物组合在13个鸡种中共检测到290条多态性条带,平均每个引物组合产生48.3奈多态性标记,同时在每个品种群体中还检测到了数量不等的特异性条带,其中寿光鸡和东乡黑鸡最多,为9条,旧院黑鸡、兴义矮脚鸡和隐性白羽鸡最少,为1条.13个鸡种聚为4类,其中隐性白羽鸡单独聚为一类,鸡种间的遗传相似系数及聚类结果与各个鸡种的地理分布、现实状况相吻合,从而表明AFLP指纹用于我国地方鸡种的遗传多态性分析、品种鉴定及品种间亲缘关系分析是可行的.     

马铃薯杂种优良株系遗传差异的AFLP分析

为明确从‘1867’ב陇薯7号’、‘MB09’ב陇薯7号’和‘MB09’ב陇薯6号’3个马铃薯杂交组合中选育出的17个杂种优良株系的遗传差异程度,用4个亲本材料作对照,利用AFLP分子标记技术对其进行了遗传差异分析。用筛选出的10对AFLP适宜引物进行PCR扩增共得到321个位点,多态性位点277个,多态性位点百分率87.29%。试验建立了各杂种优良株系的AFLP指纹图。21份马铃薯材料间的多态信息含量(PIC)平均为0.5617,Nei’s遗传多样性指数为0.3623,Shannon指数为0.5407。各材料间的平均遗传距离(GD)为0.5281,以GD值0.51为基准,21份材料分为4类:‘1867’、A-10、A-12、A-21和A-29为一类;‘陇薯6号’、‘陇薯7号’、A-14、A-23、A-26、B-13和B-14为一类;‘MB09’、B-1、B-2、B-7、B-15、B-20和C-22为一类;C-2和C-21为一类。该研究可为马铃薯杂交亲本的选择利用和杂种优良新品系的选育提供依据。