Bamboo NiR gene is associated with regeneration capacity

It was reported that the activity of NiR (nitrite reductase) enzyme encoded by the NiR gene was correlated with the regeneration ability in rice. To testify the function of NiR gene in bamboo, seven bamboo species whose calli had different differentiation rate were chosen to analyse their NiR enzyme activity. The results showed that bamboo NiR enzymatic activity had a certain correlation with the regeneration capacity. A NiR gene named DhNiR from Dendrocalamus hamiltonii with high regeneration capacity was cloned. Sequence analysis revealed that the ORF of DhNiR was 1779bp encoding 592 amino acids. Overexpression of DhNiR in rice reduced the time of shoot differentiation and increased the transformation rate, suggesting that DhNiR might play an important role in the regeneration ability of bamboo, and can be applied in regeneration and gene transformation of bamboo and other plant species.     

不同种源多穗柯主要生物活性成分与矿质元素含量变异分析

【目的】阐明多穗柯主要药用活性成分与矿质元素的种源遗传变异规律。【方法】对设置在江西省分宜县多穗柯全分布区的5个种源试验林植株叶部根皮苷、三叶苷、总黄酮、有机碳、氮、磷和钾元素含量进行测定、分析。【结果】不同种源多穗柯叶部根皮苷、三叶苷、总黄酮、有机碳、全氮、全磷含量差异均存在极显著差异(P <0.01)。不同种源根皮苷含量变异范围为16.03~64.35 mg·g-1,三叶苷含量变异范围分别为4.76~29.97 mg·g-1,根皮苷含量变异范围为61.59~81.05 mg·g-1,其中重庆北碚为根皮苷、有机碳、全磷和全氮含量高的种源,与其他种源相比根皮苷含量最高,四川米易三叶苷含量最高,江西分宜总黄酮含量最高。多穗柯根皮苷含量随日照时数增加呈显著降低趋势(P <0.05),三叶苷含量随无霜期增加呈显著降低趋势,总黄酮含量随经度增加呈极显著增加的趋势,随降水量增加呈显著增加的趋势;根皮苷与全氮含量呈极显著正相关关系,有机碳与全钾含量呈显著负相关关系;聚类分析表明,5个多穗柯种源可划分为2个类群,高根皮苷、高总黄酮、低三叶苷类群和低根皮苷、低总黄酮和高三叶苷类群。【结论】多穗柯根皮苷、三叶苷、总黄酮和主要矿质元素含量具明显种源变异,重庆北碚、四川米易和江西分宜的多穗柯为优良种源。     

播期对河套地区玉米灌浆进度的影响

旨在为玉米的高产栽培提供理论支撑。采用分期播种法,利用试验数据,建立28个生长模型（方程均通过0.01的极显著检验）,将玉米灌浆期百粒干重、百粒体积随灌浆日数增加的时段分为三阶段,即渐增期、快增期和缓增期。适时播种的玉米吐丝后百粒体积、百粒干重增加进入渐增期,终止日分别为吐丝后的6天和20天,此后进入快速增长期,时间分别为22天和18天;其后到籽粒体积和干重增加进入缓慢增长期。适时播种的玉米百粒干重增加逐渐增长期为吐丝后活动积温区间0~502.4℃·d,增幅0.014 g/℃·d;快速增长期为吐丝后活动积温区间502.4~938.4℃·d,增幅0.049 g/℃·d;缓慢增长期为吐丝后活动积温区间938.4~1355.1℃·d,增幅0.018 g/℃·d。     

Screening and Verification of Low Nitrogen Tolerant and Nitrogen Sensitive Cotton Germplasm

[Objective] The aim of this study is to evaluate nitrogen efficient cotton germplasms and improve nitrogen use efficiency. [Method] Eighty cotton germplasms were selected and evaluated in the hydroponic experiment under low (0.25 mmol·L^－1) and high (5 mmol·L^－1) nitrogen concentration. Different traits for screening were identified and nitrogen use efficiency types were classified. Field experiments were also performed for comparison and confirmation of the identified germplasms. [Result] The results showed that there were significant differences in the total plant dry matter, shoot nitrogen accumulation and nitrogen absorption efficiency in cotton germplasms at the two nitrogen levels. Based on coefficient of variation, principal component analysis and correlation, six traits including total plant dry matter, shoot dry matter, root dry matter, total nitrogen accumulation, shoot nitrogen accumulation and nitrogen absorption efficiency were used as screening indicators. According to the Heatmap clustering analysis and the nitrogen efficiency comprehensive index, two germplasms (Lu05R59 and CCRI 69) were identified as low nitrogen tolerant and nitrogen efficient, and two germplasms (Coker 201 and Xinluzhong 30) as low nitrogen sensitive and nitrogen inefficient. The results of field experiment were consistent with the results of the hydroponic culture at the seedling stage. [Conclusion] It was finally determined that Lu05R59 and CCRI 69 were the low nitrogen tolerant and nitrogen efficient germplasms, and Coker 201 and Xinluzhong 30 were low nitrogen sensitive and nitrogen inefficient germplasms. The results of these studies provide the possibility for screening and rapid identification of nitrogen use efficiency in cotton at the seedling stage, and provide the ideal materials and theoretical basis for further study of cotton nitrogen efficient.     

粪肠球菌生长曲线的测定及其对小鼠脑组织的影响

为测定致羔羊脑炎粪肠球菌（Enterococcus faecalis）的生长曲线，寻求一种快速而准确的方法测定不同生长时期粪肠球菌数量，并客观评价其毒性强弱及其对小鼠脑组织的影响，试验采用平板菌落计数法和OD-Monitor振荡比浊法（D_λ值法）测定粪肠球菌的生长曲线，探究该菌在合适时间段内的吸光值（D_{600 nm}）与平板菌落计数法测定的活菌数（CFU）的关系。用粪肠球菌感染小鼠，观察记录小鼠的死亡情况，最后采用Karber法计算粪肠球菌感染小鼠的半数致死量（LD₅₀）。用LD₅₀的剂量感染小鼠，及时采集死亡小鼠脑组织，未死亡的小鼠72 h后全部剖杀取脑组织，一部分做涂片染色，制作病理切片，观察病理变化；一部分进行培养，用于PCR方法进行细菌的回收鉴定。结果显示，用两种方法测定此株粪肠球菌的生长曲线基本一致，在2~8 h生长迅速，为对数生长期，8~14 h生长缓慢，为稳定期，14 h之后死亡数增加，进入衰亡期；对12 h粪肠球菌D_{600 nm}与CFU的关系进行探讨，成功建立回归方程：y=20.769x-1.3422，R²=0.997；其感染小鼠的LD₅₀为7.77×10¹¹个活菌。以此剂量感染小鼠，脑组织涂片染色和培养染色，均能看到革兰氏阳性球菌；PCR结果显示，均出现了大小为112 bp的条带。对脑组织进行病理学观察发现该菌可导致脑组织充血、出血、形成微血栓，脑膜充血。通过生长曲线和其D_{600 nm}与CFU关系的建立，可实时监测粪肠球菌数量，为后期更深入研究粪肠球菌穿越血脑屏障的机制奠定重要的理论基础。     

基于玻璃化转变的稻谷变温热风干燥工艺研究

为保证稻谷干燥后品质、提高干燥效率,基于不同含水率稻谷的玻璃化转变温度,提出变温热风干燥工艺。采用三因素五水平中心组合试验方法,以稻谷温度、初始含水率和热风风速为影响因素,以稻谷爆腰指数、整精米率和干燥时间为评价指标,研究稻谷玻璃化转变温度、恒温和变温干燥特性,模拟解析稻谷干燥过程中传热传质规律,以5、10、15℃的变温幅度进行变温干燥试验。结果表明,稻谷玻璃化转变温度与其含水率呈负相关,恒温干燥最佳工艺参数为稻谷温度47℃、初始含水率22.0%、热风风速0.50 m/s,干燥后稻谷爆腰指数70、整精米率57.67%、干燥时间195 min;与恒温干燥相比,以5℃和10℃为变温幅度的变温干燥工艺,干燥后稻谷爆腰指数分别降低了20和10,整精米率提高12.6、7.7个百分点,干燥时间缩短30 min和60 min。研究表明,基于玻璃化转变的稻谷变温热风干燥工艺明显改善了稻谷干燥后品质,提高了干燥效率。     

茶树蛋白激酶基因CsCIPK的克隆与表达特性分析

以茶树品种‘龙井43’作为材料,利用RT-PCR方法,从茶树的cDNA中克隆得到1个编码蛋白激酶的基因,命名为CsCIPK。序列分析表明,CsCIPK开放阅读框长度为1 341 bp,编码446个氨基酸,蛋白质分子量为414234。蛋白功能域预测和多重对比显示,CsCIPK蛋白含有1个保守的N端激酶结构域和1个相对不保守的C端调节结构域,即丝氨酸/苏氨酸激酶结构域和NAF结构域。理化性质、亲/疏水性、无序化分析显示,CsCIPK属于疏水性蛋白,理论等电点为7.04,有4段无序化区域,其二级结构分析显示主要由α螺旋、不规则卷曲组成。通过实时荧光定量PCR对‘龙井43’和‘安吉白茶’中的CsCIPK表达特性进行分析。结果显示‘龙井43’中CsCIPK的相对表达量在高温、干旱及盐处理4 h、低温处理24 h时达到最高。‘安吉白茶’中CsCIPK的相对表达量在高温及盐处理4 h、低温及干旱处理1h时达到最高。CsCIPK在‘龙井43’的根中,‘安吉白茶’茎中表达量最高。不同浓度的GA和IBA处理‘龙井43’茶苗,结果显示0.2 mmol·L-1 GA处理后,CsCIPK表达量先升高后下降,6 d时处理组为对照组的62倍;0.6 mmol·L-1 IBA处理后,CsCIPK的表达量在3 d时显著高于对照组;不同浓度GA和IBA处理后,9 d时CsCIPK表达量均显著低于对照。     

The microbial diversity and structure in peatland forest in Indonesia

The microbial community structure and function under forest in tropical peatlands are poorly understood. In this study, we investigated the microbial community structure and diversity in natural peat swamp forest soil, disturbed peat soil and mineral soil in Central Kalimantan, Indonesia, using 454 pyrosequencing. The results showed that the natural peat soil had the greatest fungal species richness (Chao1), which was significantly (p < .05) larger than that in the other two soils. Community structure of both fungi and bacteria in natural peat soil differed significantly from that in the disturbed peat soil (p = .039 and p = .045, respectively). Ascomycota (40.5%) was the most abundant phylum across the three soils followed by Basidiomycota (18.8%), Zygomycota (<0.1%) and Glomeromycota (<0.1%). The linear discriminant analysis with effect size (LEfSe) showed that Ascomycota (p < .05) and genus Gliocephalotrichum (p < .05) dominated in natural peat soil. Functionally, pathotrophs were more abundant in disturbed peat soil (p < .05). Proteobacteria (43.8%) were the most abundant phylum followed by Acidobacteria (32.6%), Actinobacteria (9.8%), Planctomycetes (1.7%). Methylocystis, Telmatospirillum, Syntrophobacter, Sorangium and Opitutus were the more abundant genera in disturbed peat soil, whereas Nevskia and Schlesneria were more abundant in mineral soil and natural peat soil, respectively. The natural peat forest soil supported a more diverse microbiology; however, the land use of such a soil can change its microbial community structure. The results provide evidence that the disturbance of tropical peat land could lead to the introduction and spread of a large number of fungal diseases     

Identification,characterization and full-length sequence analysis of a novel endornavirus in common sunflower (Helianthus annuus L.)

To identify the possible quarantine viruses in seven common sunflower varieties imported from the United States of America and the Netherlands, we tested total RNAs extracted from the leaf tissues using next-generation sequencing of small RNAs. After analysis of small RNA sequencing data, no any quarantine virus was found, but a double-stranded RNA(dsRNA) molecule showing typical genomic features of endornavirus was detected in two varieties, X3939 and SH1108. Full-length sequence and phylogenetic analysis showed that it is a novel endornavirus, temporarily named as Helianthus annuus alphaendornavirus(HaEV). Its full genome corresponds to a 14 662-bp dsRNA segment, including a 21-nt 5′ untranslated region(UTR), 3' UTR ending with the unique sequence CCCCCCCC and lacking a poly(A) tail. An open reading frame(ORF) that encodes a deduced 4 867 amino acids(aa) polyprotein with three domains: RdRP, Hel and UGT(UDP-glycosyltransferase). HaEV mainly distributed in the cytoplasm but less in the nucleus of leaf cells by fluorescence in situ hybridization(FISH) experiment. This virus has a high seed infection rate in the five varieties, X3907, X3939, A231, SH1108 and SR1320. To our knowledge, this is the first report about the virus of the family Endornaviridae in the common sunflower.     

夹竹桃花挥发油的GC-MS分析及β-葡萄糖苷酶对夹竹桃花的增香和豚鼠离体子宫平滑肌的作用

目的:建立夹竹桃花挥发油GC-MS的色谱分离鉴定方法,分析夹竹桃花挥发油的化学成分和对豚鼠离体子宫平滑肌的作用。方法:采用挥发油提取器提取夹竹桃花挥发油,以GC-MS法进行分析鉴定,建立了豚鼠离体子宫模型。结果:分别从无酶和有酶的夹竹桃花挥发油提取物中确证了58和57个化合物,挥发油对豚鼠离体子宫平滑肌有收缩作用。结论:对夹竹桃的挥发油化学成分进行了比较分析结果表明,β-葡萄糖苷酶对夹竹桃花有较弱增香作用,也能增加豚鼠离体子宫平滑肌收缩。