2012～2014年江西地区副猪嗜血杆菌分离株ERIC-PCR指纹图谱分析

在对15种副猪嗜血杆菌血清型参考株鉴定获得15种不同ERIC-PCR指纹的基础上,对2012~2014年分离自江西地区41株副猪嗜血杆菌临床分离菌株进行指纹鉴定。结果表明,41株副猪嗜血杆菌产生20种不同的指纹图谱,相同血清型的菌株表现出不同的指纹图谱,无法进行血清分型的副猪嗜血杆菌应用该方法可得到充分区分。该方法证实副猪嗜血杆菌ERIC-PCR指纹图谱存在丰富的多样性,可适用于副猪嗜血杆菌的快速基因分型及分子流行病学调查。     

副猪嗜血杆菌ERIC-PCR指纹图谱多样性研究

建立了副猪嗜血杆菌ERIC-PCR分型技术,并应用于临床分离菌株的流行病学调查。试验结果表明,47株副猪嗜血杆菌产生28种不同的指纹图谱,分离自同一猪场和相同血清型的菌株表现出不同的指纹图谱,不能进行血清分型的副猪嗜血杆菌应用该方法可得到充分区分,证实副猪嗜血杆菌ERIC指纹图谱存在丰富的多样性,ERIC-PCR方法是副猪嗜血杆菌流行病学规律分析的有效方法。     

中国东南部地区副猪嗜血杆菌分离株ERIC-PCR指纹图谱分析

采用肠杆菌基因间重复一致序列PCR方法,在对15种副猪嗜血杆菌血清型参考株鉴定获得15种不同ERIC-PCR指纹的基础上,对分离自中国东南部发生Glasser's病的不同猪场的111株副猪嗜血杆茵进行了指纹鉴定.结果显示:111株分离株显示出23种指纹图谱,前3种最流行的指纹图谱为ERIC-PCR X X(20/111),X X ⅢⅠ(9/111)和Ⅳ(8/111).且在111株分离株中,来自不同地区的分离株分别表现出不同种类的指纹图谱.该试验表明,ERIC-PCR方法可适用于对某一地区的副猪嗜血杆菌进行分子流行病学的研究和基因型的鉴定;试验结果还揭示了副猪嗜血杆茵在中国东南部地区已广泛存在并具有多样的基因型.     

广西地区副猪嗜血杆菌ERIC-PCR指纹图谱分型研究

为探讨肠道细菌基因间重复序列(ERIC)的聚合酶链反应(PCR)技术用于副猪嗜血杆菌基因分型的可行性,对分离自广西地区不同猪场的22株副猪嗜血杆菌进行ERIC-PCR指纹图谱分型研究.结果发现,22株分离株显示出12种指纹图谱,可以区分无法进行血清分型的菌株.表明ERIC-PCR可适用于对副猪嗜血杆菌进行分子流行病学调...     

6株副猪嗜血杆菌基因组DNA的PCR指纹图谱研究

根据肠道菌基因闻重复一致序列，设计了一对特异性引物，采用ERIC-PCR和RAPD技术，研究了副猪嗜血杆菌6个分离菌株的指纹图谱和DNA多态性。结果表明，6个分离株的PCR指纹图谱与15个标准血清型指纹图谱相比较可分辨出4种血清型；6个分离株的RAPD研究结果均表现出多态性。有意义的是，6个菌株的多态性DNA片段也能明显将其分为4种类型的副猪嗜血杆菌，与特异性引物PCR结果相一致。该研究可作为流行病学调查和该菌的分子分型快速诊断方法的基础。     

副猪嗜血杆菌野外分离株的ERIC-PCR 及其外膜蛋白图谱分析

为了解副猪嗜血杆菌(HPS)现地分离株的流行情况及其进化来源,本研究采用肠杆菌科基因间重复一致序列PCR(ERIC-PCR)分型和外膜蛋白(OMP)分型技术对采集自3个猪场的24株HPS分离株进行分型.结果表明,以ERIC-PCR法分析24个分离株共产生10种DNA指纹图谱,依次分别包含5株、3株、1株、7株、1株、2株、1株、1株、2株和1株分离株.其中一个猪场的分离株仅为图谱Ⅰ和Ⅱ,另外两个猪场分别为图谱Ⅲ、Ⅳ、V和Ⅵ、Ⅶ、Ⅷ、Ⅸ、X.试检测结果表明同一猪场存在的菌株有两种或两种以上基因型,并且不同猪场流行的基因型不同.采用OMP分型也表现出与ERIC-PCR分型一致的结果.因此,ERIC-PCR和OMP分型均可以用于HPS的流行病学调查.     

新疆北部部分地区副猪嗜血杆菌的ERIC-PCR指纹聚类分析

为了解新疆北部部分规模化养猪场副猪嗜血杆菌(H.parasuis)分离株的基因型,本实验采用ERIC-PCR方法结合统计学分析软件,对来源不同的12株H.parasuis进行分子指纹图谱分析.结果表明12株分离株分别位于4个聚类中,各个菌株之间的遗传距离较近,并且含有长度为1 000 bp的相同条带,相同血清型的分离株在其分子指纹聚类上均位于同一个分支中.试验结果表明基于ERIC-PCR的分子指纹聚类分析结合传统的琼脂免疫扩散法可以准确地对不同分离株H.parasuis进行分型.试验结果显示H.parasuis在该地区广泛存在并具有多种不同的基因型,同时为该地区H.parasuis的免疫防治提供了重要的实验依据.     

副猪嗜血杆菌上海分离株的生物学特性与基因型分析

从培养特性、生化特性和耐药特性等多方面研究了副猪嗜血杆菌(HPS)上海分离株的生物学特性。各分离株因生存环境差异等原因表现出不同的生化和耐药特性,分离菌株对多种药物完全耐药,并且各菌株耐药性各不同。根据16SrRNA序列设计引物建立了目的条带为821bp的特异PCR快速检测方法,并对其产物进行测序鉴定与比对分析,结果表明所有分离株的PCR扩增产物序列比对结果与此前报道的HPS的同源性为97.3%～100%。运用ERIC-PCR扩增建立指纹图谱,通过聚类分析以确定其基因型特征,ERIC-PCR将20株菌分为Ⅰ和Ⅱ2个大类群,分离株均属于Ⅰ群A亚群。快速PCR检测方法的建立和基因型研究为上海地区HPS的监控提供了理论基础,并揭示各分离菌株具有一致的遗传进化背景与方向。     

天津部分猪场副猪嗜血杆菌的分离鉴定

为了解天津部分地区2014年副猪嗜血杆菌病的发病情况及菌株的致病力,收集本地区45个规模化养猪场疑似副猪嗜血杆菌病猪的病料53份,通过病原分离培养、培养特性及染色特性观察、生化试验及PCR扩增等方法进行鉴定,最终分离到阳性样品15例,阳性率28.3%;挑选2株(TJ-0121A,TJ-0134A)分离于临床症状典型病猪,且生物学特性典型的分离株进行豚鼠副猪嗜血杆菌的人工感染试验,每只豚鼠腹腔注射2.0×109 CFU/mL菌液。TJ-0121A分离株接种豚鼠后,豚鼠全部死亡;TJ-0134A分离株感染7d后未出现死亡。对所有豚鼠的肝、肺、脾、淋巴结、肾、心肌进行副猪嗜血杆菌分离和PCR检测,TJ-0121A组死亡豚鼠的所有组织均可分离并检测到副猪嗜血杆菌;TJ-0134A组豚鼠仅肺脏分离检测到副猪嗜血杆菌,说明不同菌株间的致病力存在差异。     

副猪嗜血杆菌ompP2基因的克隆鉴定及序列分析

用PCR技术对华南地区分离的17株不同血清型副猪嗜血杆菌菌株ompP2基因进行克隆鉴定,并以CLUSTALS1和PHYLIP-3.68软件将ompP2基因序列进行比对和遗传进化分析.17株副猪嗜血杆菌茵株中均能扩出ompP2基因,克隆测序结果发现ompP2基因大小有所不同,与参考序列ABKM01000007的同源性在92％～99％之间.序列比较结果显示,ompP2基因与GenBank公布的副猪嗜血杆茵全基因组测序中的ompP2基因序列具有较高的同源性,不同菌株ompP2基因序列大小存在差异,为进一步验证ompP2蛋白的功能及相关研究奠定了基础.     

Characterization of the diversity of Haemophilus parasuis field isolates by use of serotyping and genotyping

OBJECTIVE: To characterize the genetic diversity of Haemophilus parasuis field isolates with regard to serovar, herd of origin, and site of isolation. SAMPLE POPULATION: Isolates of H parasuis obtained from pigs in 15 North American herds and multi-farm systems. PROCEDURE: 98 H parasuis isolates were genotyped with the enterobacterial repetitive intergeneic consensus based-polymerase chain reaction (ERIC-PCR) technique and serotyped via agar gel precipitation test. Genomic fingerprints were analyzed and dendrograms were constructed to identify strains from the same serovar group, herd of origin, or isolation site and to evaluate the genetic variability within these categories. RESULTS: Serovar 4 (39%) and nontypeable (NT) isolates (27%) were most prevalent. Thirty-four distinct strains were identified among the 98 isolates, using a 90% similarity cutoff. Strains from serovar 4 and NT isolates had high genetic diversity (12 and 18 strains, respectively). One to 3 major clusters of prevalent strains could be identified in most of the evaluated herds. Haemophilus parasuis strains isolated from the upper respiratory tract were either serovar 3 or NT isolates. Potentially virulent strains (isolated from systemic sites) were either serovars 1, 2, 4, 5, 12, 13, or 14, or NT isolates. CONCLUSIONS AND CLINICAL RELEVANCE: Although H parasuis had high genetic diversity overall, only a few strains caused disease in these herds. The ERIC-PCR technique was more discriminative than serotyping, and a broad genetic variety was observed within particular serovar groups.     

Analyses of Dutch Haemophilus parasuis isolates by serotyping, genotyping by ERIC-PCR and Hsp60 sequences and the presence of the virulence associated trimeric autotransporters marker

In this study, 117 isolates of Haemophilus parasuis from organs and tissues from pigs showing clinical signs, were characterised and compared with 10 H. parasuis reference strains. The isolates were subjected to the 16S rRNA gene PCR and subsequently serotyped, genotyped by 60-kDa heat shock protein (Hsp60) gene sequences, the enterobacterial repetitive intergenic consensus (ERIC) PCR and a multiplex PCR for the detection of the vtaA virulence associated trimeric autotransporter genes. Serotyping revealed the presence of 13 H. parasuis serovars. Serovars 3 and 10 were not detected, and 16 of the 117 H. parasuis isolates could not be typed by specific antisera. All isolates were positive in the 16S rRNA gene specific H. parasuis PCR. ERIC-PCR revealed a very heterogeneous pattern with 61 clusters; based on a 90% agreement. In total, 46 different Hsp60 sequence types were detected. Using 98% sequence similarity, as threshold for separation, 22 separate Hsp60 sequence clusters were distinguished. There was no correlation between H. parasuis serovars and ERIC-PCR clusters or Hsp60 sequence types, but both the ERIC-PCR and the Hsp60 sequence typing are suited as markers for H. parasuis molecular-epidemiology studies. In total, 102 H. parasuis swine isolates corresponded to the virulence associated group 1 vtaA type. The group 1 vtaA was detected in 12 different serovars. Only four of the 46 Hsp60 sequence types were not associated with the group 1 vtaA. This study shows that Dutch H. parasuis isolates from pigs with clinical signs have both a high serovar and genotypic lineage diversity. A majority of the known serovars contain the group 1 vtaA.     

副猪嗜血杆菌tbpA基因PCR—RFLP分型

副猪嗜血杆菌（Haemophilus parasuis,HPs）是目前影响世界养猪业的重要病原之一。本试验利用针对HPs转铁蛋白基因tbpA的PCR—RFLP分型方法,对2003-2008年分离自江苏、上海、广西、浙江、江西和安徽等6省市的57个HPs分离株及15个参考菌株进行PCR—RFLP分析。结果显示,15个血清型参考菌株分为9种基因型,57个HPs流行分离株分为15种基因型,其中在我国最为流行的基因型分别为DBN（38％）,ABN（18％）与DBP（12％）。本研究表明副猪嗜血杆菌在我国猪群中普遍存在,并至少有15个RFLP基因亚型,从而为我国HPs病的防治提供了重要理论依据。     

副猪嗜血杆菌的分离鉴定及16S rRNA序列分析

从云南某规模化养猪场病猪肺脏分离到1株革兰氏阴性小杆菌,经细菌生化鉴定、PCR鉴定和16S rRNA序列比对鉴定为副猪嗜血杆菌。抗生素药物敏感试验结果表明,分离菌株对四环素、红霉素、氯霉素、头孢噻吩高敏;对庆大霉素、氧氟沙星、诺氟沙星中敏;对磺胺甲唑耐药。16S rRNA分析结果表明,该分离株与GenBank中的Hps参考株AB078973(基因登录号)同源性为100%,将分离菌株鉴定为副猪嗜血杆菌。16S rRNA遗传进化关系表明,分离株与副猪嗜血杆菌3株血清5型参考株AB078972、AB078973、AB078974的16S rRNA序列位于一个分支上,遗传进化关系最近,它们之间的核苷酸同源性在99.0%~99.4%之间,初步鉴定为血清5型副猪嗜血杆菌,致病性试验结果表明,分离菌株对小白鼠有强致病性,命名为YN-1株。     

Establishment, validation and use of the Kielstein-Rapp-Gabrielson serotyping scheme for Haemophilus parasuis

OBJECTIVES: To produce antisera to the 15 recognised reference strains of the Kielstein-Rapp-Gabrielson (KRG) serotyping scheme for Haemophilus parasuis, validate those sera and use them to serotype 46 Australian field isolates of H parasuis. DESIGN: Antisera were produced in rabbits and validated by cross-testing with the reference strains and re-testing 15 Australian field isolates of H parasuis that had been previously serotyped in the United States of America. The validated antisera were then used to determine the serovar of 46 Australian isolates. RESULTS: Monospecific antisera were produced for 14 of the 15 KRG serovars of H parasuis. Two Australian field isolates, confirmed previously as serovars 1 and 7, were used to produce monospecific antisera for serovars 1 and 7 respectively. The antiserum for serovar 4 gave a one-way cross reaction with the antigen of serovar 14. The typing antisera correctly typed all 15 H parasuis that had been previously typed by antisera produced overseas. The 46 field isolates were shown to belong to serovars 2 (two isolates), 4 (one isolate), 5 (18 isolates), 12 (two isolates) and 13 (four isolates). The remaining 19 isolates were non-typable. CONCLUSION: Serotyping of H parasuis isolates is now available in Australia. H parasuis serovars 5 and 13 remain the predominant serovars present in Australian pigs.     

副猪嗜血杆菌江西株的分离鉴定及药敏试验

从江西省彭泽县某猪场出现咳嗽、呼吸困难、胸膜有化脓性纤维蛋白渗出物病变的病死猪中分离到4株革兰氏阴性细小杆菌,对其进行培养特性和生化特性鉴定;用副猪嗜血杆菌16S rRNA的特异性PCR引物,通过PCR技术可从分离菌中扩增出821 bp的特异基因片段,表明该分离菌株为副猪嗜血杆菌。药敏试验结果表明,4株分离菌对头孢唑啉高度敏感,对头孢哌酮、氯霉素等敏感,而对复方新诺明、青霉素G等有抵抗力。小白鼠攻毒试验结果显示4株分离株均有致病性。