副猪嗜血杆菌的分离鉴定及16S rRNA序列分析

从云南某规模化养猪场病猪肺脏分离到1株革兰氏阴性小杆菌,经细菌生化鉴定、PCR鉴定和16S rRNA序列比对鉴定为副猪嗜血杆菌。抗生素药物敏感试验结果表明,分离菌株对四环素、红霉素、氯霉素、头孢噻吩高敏;对庆大霉素、氧氟沙星、诺氟沙星中敏;对磺胺甲唑耐药。16S rRNA分析结果表明,该分离株与GenBank中的Hps参考株AB078973(基因登录号)同源性为100%,将分离菌株鉴定为副猪嗜血杆菌。16S rRNA遗传进化关系表明,分离株与副猪嗜血杆菌3株血清5型参考株AB078972、AB078973、AB078974的16S rRNA序列位于一个分支上,遗传进化关系最近,它们之间的核苷酸同源性在99.0%~99.4%之间,初步鉴定为血清5型副猪嗜血杆菌,致病性试验结果表明,分离菌株对小白鼠有强致病性,命名为YN-1株。     

一株副猪嗜血杆菌的分离鉴定及其遗传进化分析

为确认导致甘肃省平凉市一农场猪群死亡的原因,采集病死猪不同组织样品进行检测,从病死猪的脏器组织中分离到1株革兰阴性杆菌,并对其进行生化鉴定、16S rRNA鉴定及遗传进化分析,同时进行分离菌的致病性试验、耐药性分析、V因子需要试验、"卫星现象"观察。结果表明:分离菌生化特性均符合副猪嗜血杆菌;其16S rRNA基因序列与Genbank中副猪嗜血杆菌株的同源性均高达99%。因此,将该分离菌鉴定为副猪嗜血杆菌,将其命名为PL2016。动物试验及耐药性试验表明,该分离菌具有较强的致病性和多重耐药性。16S rRNA遗传进化分析表明,该分离菌与副猪嗜血杆菌其他菌株具有很高的同源性,其核酸序列相似性高达99%以上。遗传进化分析表明,该分离菌的ompP2、sodA基因与副猪嗜血杆菌其他菌株具有很高的同源性,其核酸序列相似性高达95%以上。     

副猪嗜血杆菌的分离鉴定及药敏试验

黑龙江省近几年频繁发生以多发性浆膜炎、关节炎、脑膜炎以及急性死亡为特征的传染病,为猪场造成严重经济损失,为了确诊是否有副猪嗜血杆菌感染,采集病死猪肝脏、脾脏和肺脏等病料,进行副猪嗜血杆菌的分离;对其理化特性进行鉴定,应用PCR方法对其16S rRNA基因扩增后进行克隆测序,将测序结果在GenBank上进行BLAST分析,把相近的基因序列应用DNAStar软件进行同源性和进化关系分析;用分离菌株进行药物敏感性试验,筛选敏感药物。结果分离出一种具有多形性的NAD依赖性菌株,经鉴定为副猪嗜血杆菌;16S rRNA基因进化分析结果表明,分离菌株与以往报道的副猪嗜血杆菌中国、日本和美国分离株属于同一亚群,而西班牙分离株属于单独的亚群;分离菌株对壮观霉素和头孢拉定高度敏感。     

副猪嗜血杆菌16S rRNA基因的克隆及序列分析

本研究旨在从分子水平对副猪嗜血杆菌湖南分离株进行鉴定,并用16S rRNA序列分析不同血型副猪嗜血杆菌之间的遗传关系。利用PCR扩增副猪嗜血杆菌的16S rRNA,应用ClustalX 1.81程序对序列进行比对,再用Phylip 3.67程序MP法和Mage 4.0程序NJ法绘制种系发育树,并用Puzzle 5.2程序构建最大似然树,同时利用DNAStar 5.0中的Megalign程序进行同源性分析。结果显示,所获得的16S rRNA序列长度均为783 bp,湖南分离株与已知5型副猪嗜血杆菌位于同一分枝。结果表明,湖南分离株属于5型副猪嗜血杆菌,为副猪嗜血杆菌的分子流行病学和其相关疾病的诊断奠定基础。     

副猪嗜血杆菌部分16S rRNA基因的克隆及序列分析

副猪嗜血杆菌(Haenophilus parasuis,Hps)为副猪嗜血杆菌病的病原体。目前,副猪嗜血杆菌地方分离株基因背景研究国内报道不多,试验针对临床分离的2株Hps进行16S rRNA基因片段的扩增、克隆、测序及同源性比较,以期在分子水平对副猪嗜血杆菌进行鉴定。1材料与方法1.1菌种和质粒副     

副猪嗜血杆菌Shandong2007株的分离与鉴定

对1例临床症状、病理剖检变化疑似副猪嗜血杆菌病的仔猪病料进行实验室诊断,进行了细菌形态观察、培养特性和生化特性等鉴定,根据副猪嗜血杆菌的16 S rRNA基因设计特异性引物进行PCR扩增,将822 bp片段连入T-载体后测序,再通过GenBank进行比对分析.生化试验结果为接触酶阳性,氧化酶和H2S阴性;生长需要NAD,发酵果糖、半乳糖和蔗糖等,不分解D-甘露醇和D-山梨醇.药敏试验显示,对氨苄青霉素、丁胺卡那霉素等药物敏感.PCR鉴定结果与国外副猪嗜血杆菌菌株16 S rRNA序列的同源性为99%以上,初步鉴定该分离菌株为副猪嗜血杆菌(Haemophilus parasuis,Hps).     

猪场副猪嗜血杆菌的分离鉴定及药敏试验

为查明贵阳市花溪区麦坪镇某猪场仔猪发生呼吸道疾病的病因,对送检的2头病猪采集病料进行细菌分离培养、染色镜检、生化试验、PCR扩增及测序、药敏试验。结果:从病料样本中分离得到1株细菌,根据形态学和生化试验初步鉴定为副猪嗜血杆菌;应用细菌16S rRNA序列分析技术从分子水平对分离细菌进行分型鉴定,运用DNAStar软件与不同血清型副猪嗜血杆菌基因序列进行比对,发现分离菌与不同血清型副猪嗜血杆菌菌株16S rRNA序列同源且相似性为97.4%～100%,其中与血清5型相似性最高;系统进化分析显示,分离菌株与血清5型副猪嗜血杆菌进化关系最近;分离菌株对利福平、头孢氨苄、阿米卡星、环丙沙星、万古霉素敏感。结论:综合分离细菌传统鉴定方法和分子生物学鉴定方法的实验结果,确定分离菌株属于血清5型副猪嗜血杆菌。     

副猪嗜血杆菌thyA基因的序列分析

为探究副猪嗜血杆菌thyA基因的遗传特性,针对于分离的副猪嗜血杆菌辽宁分离株的thyA基因进行测序,并运用软件对基因序列及氨基酸序列的同源性等进行分析研究。结果显示,thyA基因在副猪嗜血杆菌辽宁株亲缘性较高,其中基因序列与已公布的参考菌株同源性为95.7%~100%,氨基酸序列同源性为97.2%~100%,预测thyA基因编码蛋白的三级结构,发现thyA毒力基因在副猪嗜血杆菌中保守存在,为揭示thyA基因在副猪嗜血杆菌中功能奠定了一定基础。     

副猪嗜血杆菌PCR检测方法的建立与初步应用

根据副猪嗜血杆菌16 S rRNA基因设计了一对引物,通过最佳条件摸索扩增出大小为821 bp的特异目的基因片段,建立了快速检测副猪嗜血杆茵的PCR方法,该方法最低检出量达10-3 ng,且对大肠埃希茵、金黄色葡萄球菌、传染性胸膜肺炎放线杆菌和巴氏杆茵等均无交叉反应.用该PCR方法从门诊送检的病料中检测出4株副猪嗜血杆菌,并对分离株SH0854P的PCR扩增产物进行测序与对比分析,其与已发表的GenBank中的相关菌株的同源性为97.3%～100%.     

闽北地区副猪嗜血杆菌的分离鉴定及药敏试验

从闽北地区16个规模化猪场分离到5株病原菌,经过分离纯化、形态学观察、细菌生化鉴定、PCR鉴定以及测序分析,分离菌株与已知的副猪嗜血杆菌(Haemophilus parasuis,Hps)菌株16S rRNA序列同源性均在96%以上,确定5株病原菌均为副猪嗜血杆菌。通过致病性试验表明:分离菌株均有一定的致病性,其中Hps-jo株分离菌致死率达83.3%。细菌药敏试验表明:分离菌株对头孢噻呋、头孢氨苄、氟苯尼考敏感;对万古霉素、强力霉素、四环素、多黏菌素中度敏感;对环丙沙星、阿莫西林、恩诺沙星低、链霉素、TMP、新霉素耐药率达100%。试验结果为闽西地区副猪嗜血杆菌病的防治提供了参考。     

家养野猪副猪嗜血杆菌的分离鉴定及16S rRNA序列分析

对江西省某家养野猪场临诊疑似副猪嗜血杆菌（Haemophilusparasuis,Hps）感染的病例进行细菌分离鉴定,PCR扩增分离菌株的16SrRNA并进行测序分析,并对分离菌进行细菌形态、生化鉴定和PCR鉴定及序列比对分析。结果显示,获得1株家养野猪源Hps分离株（命名为HPJXYZ01）,该分离株与国内外参考菌株序列之闻的同源性为93．1％～99．2％,与本实验室江西省家猪源分离株的同源性为84％～92．1％。结果表明,江西省家养野猪中存在Hps感染,分离株与国内外家猪源Hps间的16SrRNA序列差异不大,Hps16SrRNA核苷酸序列比较稳定,其进化不存在明显的地域相关性。     

副猪嗜血杆菌江西株的分离鉴定及药敏试验

从江西省彭泽县某猪场出现咳嗽、呼吸困难、胸膜有化脓性纤维蛋白渗出物病变的病死猪中分离到4株革兰氏阴性细小杆菌,对其进行培养特性和生化特性鉴定;用副猪嗜血杆菌16S rRNA的特异性PCR引物,通过PCR技术可从分离菌中扩增出821 bp的特异基因片段,表明该分离菌株为副猪嗜血杆菌。药敏试验结果表明,4株分离菌对头孢唑啉高度敏感,对头孢哌酮、氯霉素等敏感,而对复方新诺明、青霉素G等有抵抗力。小白鼠攻毒试验结果显示4株分离株均有致病性。     

First isolation of Haemophilus parasuis and other NAD-dependent Pasteurellaceae of swine from European wild boars

Haemophilus parasuis is a colonizer of the upper respiratory tract of pigs and the etiological agent of Gl?sser's disease, which is characterized by a fibrinous polyserositis, meningitis and arthritis. Gl?sser's disease has never been reported in wild boar (Sus scrofa), although antibodies against H. parasuis have been detected. The goal of this study was to confirm the presence of this bacterium in wild boar by bacterial isolation and to compare the strains to H. parasuis from domesticated pigs. Therefore, nasal swabs from 42 hunted wild boars were processed for bacterial isolation and subsequent H. parasuis identification by specific PCR, biochemical tests and 16S rRNA gene sequencing. Two different strains of H. parasuis from two wild boars were isolated. These strains belonged to serotype 2 and were included by 16S rRNA gene sequencing and MLST analysis in a cluster with other H. parasuis strains of nasal origin from domestic pigs. During this study, Actinobacillus minor and Actinobacillus indolicus, which are NAD-dependent Pasteurellaceae closely related to H. parasuis, were also isolated. Our results indicate similarities in the respiratory microbiota of wild boars and domestic pigs, and although H. parasuis was isolated from wild boars, more studies are needed to determine if this could be a source of H. parasuis infection for domestic pigs.     

Molecular Identification and Genetic Evolution Analysis of Haemophilus parasuis 16S rRNA Gene in Local Pig Origin

To study the molecular genetic evolution characteristics of Haemophilus parasuis(Hps), PCR was used to determine the 16S rRNA gene of the strain XY0501 isolated from local pigs in Henan province, and genetic evolution analysis was conducted. The results showed that the amplication of 16S rRNA of the isolate XY0501 was 822 bp, the nucleotide sequence similarity among the reference strains was 97.1% to 99.3%, and 99.3% with the strain serotype 5. The phylogenetic tree based on 16S rRNA revealed that the Hps isolate XY0501 from local pigs belonged to the same branch with reference strain serotype 5. The results identified that the Hps infection could cause severe clinical symptoms in pigs, but infection source need to be further investigation,in addition, 16S rRNA of Hps of different serotypes was conserved and no species difference.     

猪胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌复合PCR检测方法的建立

目的建立可以同时检测猪胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌的快速而可靠的PCR检测方法。方法和结果根据胸膜肺炎放线杆菌的Apx-VIA基因序列、多杀性巴氏杆菌和副猪嗜血杆菌的16SrRNA基因序列设计5条引物。猪胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌模板的PCR扩增产物大小分别为342bp,485bp和1258bp。复合PCR对1～12型猪胸膜肺炎放线杆菌标准株,6株多杀性巴氏杆菌标准株,1～15型副猪嗜血杆菌以及25株经生化鉴定确认为上述三种细菌的分离株的基因组DNA作为模板进行检测,均获得预期大小的扩增产物。以猪放线杆菌、吲哚放线杆菌等14种常见细菌作为阴性对照进行PCR检测,结果仅有支气管败血波氏杆菌产生了可以和上述三个特异性条带明显区分的PCR产物。复合PCR针对胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌的敏感性分别为14pg、34pg和37pg。结论本研究建立的复合PCR特异性好,敏感性高,可以用于猪胸膜肺炎放线杆菌、多杀性巴氏杆菌和副猪嗜血杆菌的快速检测。     

Analyses of Dutch Haemophilus parasuis isolates by serotyping, genotyping by ERIC-PCR and Hsp60 sequences and the presence of the virulence associated trimeric autotransporters marker

In this study, 117 isolates of Haemophilus parasuis from organs and tissues from pigs showing clinical signs, were characterised and compared with 10 H. parasuis reference strains. The isolates were subjected to the 16S rRNA gene PCR and subsequently serotyped, genotyped by 60-kDa heat shock protein (Hsp60) gene sequences, the enterobacterial repetitive intergenic consensus (ERIC) PCR and a multiplex PCR for the detection of the vtaA virulence associated trimeric autotransporter genes. Serotyping revealed the presence of 13 H. parasuis serovars. Serovars 3 and 10 were not detected, and 16 of the 117 H. parasuis isolates could not be typed by specific antisera. All isolates were positive in the 16S rRNA gene specific H. parasuis PCR. ERIC-PCR revealed a very heterogeneous pattern with 61 clusters; based on a 90% agreement. In total, 46 different Hsp60 sequence types were detected. Using 98% sequence similarity, as threshold for separation, 22 separate Hsp60 sequence clusters were distinguished. There was no correlation between H. parasuis serovars and ERIC-PCR clusters or Hsp60 sequence types, but both the ERIC-PCR and the Hsp60 sequence typing are suited as markers for H. parasuis molecular-epidemiology studies. In total, 102 H. parasuis swine isolates corresponded to the virulence associated group 1 vtaA type. The group 1 vtaA was detected in 12 different serovars. Only four of the 46 Hsp60 sequence types were not associated with the group 1 vtaA. This study shows that Dutch H. parasuis isolates from pigs with clinical signs have both a high serovar and genotypic lineage diversity. A majority of the known serovars contain the group 1 vtaA.     

Isolation and Identification of Haemophilus parasuis SD02 strain

A bacterial strain was isolated from the sick pigs suspiciously infected by polyserositis and arthritis in a pig farm in Shandong Province,and identified through morphological observation,culture traits,biochemical characteristics and PCR amplification.Additionally,primers were de-signed according to the 16S rRNA sequence of Haemophilus parasuis,and the bacterial strain was amplified by PCR.The amplified fragments of approximately 1 400 bp was sequenced,and aligned with the sequence in Gen Bank.The results showed that it shared the homology of 97%-99%with the 16S rRNA sequence of foreign H.parasuis,and confirmed as H.parasuis(HPS).The strain was determined as serotype 4 through serotype identification.The strain was named SD02.     

云南鸭疫里默氏杆菌外膜蛋白A 及16S rRNA序列分析

为了探讨鸭疫里默氏杆菌(Riemerella anatipestifer, RA)云南流行株的外膜蛋白A (OmpA)的基因序列差异及其与16S rRNA序列的相关性,PCR扩增18株云南流行株鸭疫里默氏杆菌OmpA基因及16S rRNA核苷酸序列,分别构建其系统进化树,分析其系统进化关系。结果表明,18株鸭疫里默氏杆菌OmpA基因分为2个群,其同源性分别为86%~99.2%和92.6%~100%。18株鸭疫里默氏杆菌16S rRNA基因同属1个群,同源性高达96.1%~100%。 RA-1、RA-2、RA-11和RA-39 4株分离株的OmpA基因位于进化树的同一个亚群,其16S rRNA基因也位于进化树的同一亚群,两者呈现出明显的相关关系,其他14株分离株的OmpA基因系统进化树与16S rRNA基因系统进化树无明显的相关关系。