Analysis of methanogenic archaeal communities of rumen fluid and rumen particles from Korean black goats

Molecular diversity of methanogens in the rumen of Korean black goats was investigated with 16S rRNA gene clone libraries using methanogen‐specific primers. The libraries were composed of rumen fluid‐associated methanogens (FAM) and rumen particle‐associated methanogens (PAM) from rumen‐fistulated Korean black goats. Among the 141 clones of the FAM library, the sequences were mostly related to two phyla, the Methanobacteriaceae family (77.3%) and the Thermoplasmatales family (22.7%); and among the 68 clones of the PAM library, sequences were also mainly clustered in the two phyla, the Thermoplasmatales family (63.24%) and the Methanobacteriaceae family (35.29%). Most of the sequenced clones in the two libraries were closely related to uncultured methanogenic archaeon. Quantitative real‐time PCR revealed that PAM (8.97 log 10) had significantly higher (P < 0.01) density of methanogens by the methanogenic 16S rRNA gene copies than FAM (7.57 log 10). The two clone libraries also showed difference in Shannon index (FAM library 1.70 and PAM library 1.59) and Chao 1 estimator (FAM library 18 and PAM library 17 operational taxonomic units). Apparent differences found in the microbial community from the two 16S rRNA gene libraries could be a result of such factors as the chemical and physical nature of the target material surface, types or component of diets, the interaction between the methanogens and other microbes, and age of the experimental goats.     

醋糟菌糠对3种作物土壤微生物及酶活性的影响

为研究醋糟菌糠作为一种生物肥料对土壤肥力的影响,为解决食用菌菌糠对环境污染及其有效利用提供科学依据,本文通过田间试验,对玉米、高粱、糯玉米3种作物基施醋糟菌糠后不同生育期的土壤脲酶、蔗糖酶和过氧化氢酶活性,细菌、放线菌和真菌数量,及微生物量碳、氮含量进行测试。研究结果表明:1)醋糟菌糠显著提高了作物根际土壤细菌、放线菌和真菌的数量。在作物整个生育期,加入醋糟菌糠的土壤细菌数量比对照提高32%~54%;放线菌数量在成熟期提高明显,玉米田土壤放线菌数量增幅最大,为101%;真菌数量变化总体趋势呈现先升高后下降的趋势。2)醋糟菌糠的施入增加了作物根际土壤脲酶、过氧化氢酶、蔗糖酶的活性。种植高粱、玉米和糯玉米土壤的脲酶活性增长率分别为239%、189%和185%;3种作物的土壤过氧化氢酶活性在抽穗期最高,最大增长率为40%;3种作物的土壤蔗糖酶活性在不同生育期变化趋势不同,玉米各生育期土壤蔗糖酶活性变化较为稳定,其增长率分别为38%、28%、48%。3)醋糟菌糠的施入增加了作物根际土壤微生物碳氮的含量,不同生育期3种作物的土壤微生物碳含量增幅为58.10~407.67 mg·kg-1,微生物氮含量增幅为11.98~27.55 mg·kg-1。由此可见,醋糟菌糠的施用可以增强土壤生产力的可持续性,从而达到保护和改善土壤环境的效果。同时该研究也为醋糟菌糠的有效利用提供了一定的科学依据。     

Long-term deep sedation using Zoletil and haloperidol for the treatment of streptococcal pneumonia in an orangutan (Pongo pygmaeus)

A 13-year-old Bornean orangutan diagnosed with life threatening Streptococcus pyogenes broncho-pneumonia was kept in a state of deep sedation for 20 days via continuous intra-venous (IV) infusion of zolazepam -tiletamine and IV haloperidol to allow consistent IV administration of ceftazidime and gatifloxacine. The use of long-term deep sedation allowed carrying out a particularly demanding treatment not generally associated with zoological patients. The treatment was ultimately successful.     

ULTRASONOGRAPHIC EVALUATION OF THE EXTERNAL EAR CANAL AND TYMPANIC MEMBRANE IN DOGS

Ultrasonographic imaging of the canine external ear canal, tympanic membrane, and tympanic bulla was described in five healthy beagle dogs before and after infusion of saline into the ear canal. Saline served as an acoustic window. With this method, the external ear canal, and tympanic bulla were visible in the same imaging plane and the integrity of the tympanic membrane could be evaluated indirectly by confirming an intact tympanic membrane, which appeared at the end of the ear canal as a hyperechoic line with reverberation. Experimentally, perforated tympanic membrane could be evaluated by identifying anechoic saline in the tympanic bulla lumen. The air and fluid-filled tympanic bulla were also visualized. Ultrasonography with saline as an acoustic window appears to be helpful for the evaluation of the external ear canal, tympanic membrane, and tympanic bulla and it may have the potential to be a useful clinical tool in evaluation of integrity of the tympanic membrane.     

Simple method for extracting the seasonal signals of photochemical reflectance index and normalized difference vegetation index measured using a spectral reflectance sensor

A spectral reflectance sensor(SRS) fixed on the near-surface ground was developed to support the continuous monitoring of vegetation indices such as the normalized difference vegetation index(NDVI) and photochemical reflectance index(PRI). NDVI is useful for indicating crop growth/phenology, whereas PRI was developed for observing physiological conditions. Thus, the seasonal change patterns of NDVI and PRI are two valuable pieces of information in a crop-monitoring system. However, capturing the seasonal patterns is considered challenging because the vegetation index values estimated by the reflection from vegetation are often governed by meteorological conditions, such as solar irradiance and precipitation. Further, unlike growth/phenology, the physiological condition has diurnal changes as well as seasonal characteristics. This study proposed a novel filtering method for extracting the seasonal signals of SRS-based NDVI and PRI in paddy rice, barley, and garlic. First, the measurement accuracy of SRSs was compared with handheld spectrometers, and the R~2 values between the two devices were 0.96 and 0.81 for NDVI and PRI, respectively. Second, the experimental study of threshold criteria with respect to meteorological variables(i.e., insolation, cloudiness, sunshine duration, and precipitation) was conducted, and sunshine duration was the most useful one for excluding distorted values of the vegetation indices. After data processing based on sunshine duration, the R2 values between the measured vegetation indices and the extracted seasonal signals of vegetation indices increased by approximately 0.002–0.004(NDVI) and 0.065–0.298(PRI) on the three crops, and the seasonal signals of vegetation indices became noticeably improved. This method will contribute to an agricultural monitoring system by identifying the seasonal changes in crop growth and physiological conditions.     

Effects of temperature, salinity and irradiance on the growth of the toxic dinoflagellate Gymnodinium catenatum (Dinophyceae) isolated from Hiroshima Bay, Japan

ABSTRACT: Temperature and salinity ranges in which Gymnodinium catenatum (Hiroshima Bay strain) showed specific growth rates higher than 0.2/day were approximately 20–30°C and 20–32. The specific growth rate (μ), expressed as a polynomial equation as functions of temperature ( T ; °C) and salinity ( S ) were μ = (−6.84 × 10⁻⁴ T ² + 0.0354 T – 0.213) × (−1.03 × 10⁻³ S ² + 0.0579 S – 0.548)/0.31; the maximum growth rate (0.31/day) was obtained at 25°C and 30. From a comparison with field data recording temperature, salinity and light intensity, this species may be expected to bloom from summer to autumn in Hiroshima Bay.     

Effects of starch and protein sources on starch disappearance in the gastrointestinal tract of Hanwoo (Korean native) steers

Hanwoo (Korean native) steers (274.8 ± 4.6 kg) with ruminal and duodenal cannulae were used in a 4 × 4 Latin square design experiment to examine the effects of dietary treatments on starch disappearance in the gastrointestinal tract. Dietary treatments consisted of concentrate that were based on ground corn with soybean meal (C‐SBM), ground corn with corn gluten meal (C‐CGM), ground barley with soybean meal (B‐SBM) and ground barley with corn gluten meal (B‐CGM). Although the intakes of starch and protein for steers fed experimental diets were different, it did not change ruminal pH and total volatile fatty acid concentrations. Average duodenal CP flow and quantity of CP apparently digested post‐ruminally was higher (P = 0.001) for CGM‐based diets than SBM‐based diets. There were increases in quantity (P < 0.001) and percentage (P < 0.001) of corn starch digested post‐ruminally compared to barley starch. Synchronized diets showed higher percentages (P = 0.03) of starch apparently digested post‐ruminally than asynchronization. Hanwoo steers fed a corn‐based diet with a large quantity of starch reaching the duodenum and fed C‐CGM supplying great amounts of protein to the small intestine may have contributed to increased post‐ruminal starch digestion.     

Physiological basis of differential phytotoxic activity between fenoxaprop-P-ethyl and cyhalofop-butyl-treated barnyardgrass

This study investigated the physiological causes of differences in phytotoxic symptoms shown in barnyardgrass from foliar applications of the herbicides fenoxaprop-P-ethyl and cyhalofop-butyl. When these were applied to the third leaves of the whole plant, the chlorosis and desiccation in the third leaf was greater in fenoxaprop-P-ethyl than cyhalofop-butyl. However, initial growth inhibition of the fourth leaf was greater when using cyhalofop-butyl than when using fenoxaprop-P-ethyl. In the shoot regrowth test, regrowth at five days after treatment (DAT) was smaller in cyhalofop-butyl than in fenoxaprop-P-ethyl; the regrowth at 10 DAT exhibited the reverse trend. The chlorosis (decrease of chlorophylls: carotenoids ratio) in barnyardgrass leaf segments that were floated on herbicide solution was greater in the fenoxaprop-P-ethyl treatment. These results indicate that different herbicidal responses induced by the two herbicides are likely to be related to differential translocation and metabolism. The relatively light chlorosis and desiccation in treated leaves, severe cessation of initial growth (but a lower final herbicidal efficacy in the cyhalofop-butyl treatment) are probably related to its rapid translocation to the meristem region from the treated leaf, followed by faster metabolism. In contrast, the relatively greater chlorosis and desiccation compared to inhibition of initial growth in the fenoxaprop-P-ethyl treatment is likely to be related to its relatively slower translocation and metabolism in the treated leaf.