番茄ShARPC5抗白粉病功能分析

【目的】白粉病（powdery mildew）是番茄生产上的重要病害,严重影响番茄的产量。番茄基因组测序工作的完成为抗病基因挖掘提供了重要的信息资源。ARP2/3（actin-related protein 2 and 3）复合体是肌动蛋白微丝骨架动力学的主要调控因子,能够参与包括响应外界胁迫等多种细胞学过程。本研究通过对番茄ARPC5（actin-related protein C5）进行克隆和抗病功能验证,为番茄基因组信息完善、抗病机制解析和分子育种等方面打下基础。【方法】从番茄LA1777（Solanum habrochaites）cDNA中PCR扩增ShARPC5,使用DNAMAN 6.0进行多序列比对;MEGA 6.0构建系统发育树;应用在线工具ProtComp v. 9.0进行亚细胞定位预测。利用实时荧光定量PCR（qRT-PCR）比较接种白粉菌（Oidium neolycopersici,On-Lz）后高感品种Moneymaker（MM）和高抗品种LA1777中番茄ARPC5的表达特征,分析白粉菌侵染与ARPC5表达的相关性。应用病毒诱导的基因沉默（virus-induced gene silencing,VIGS）技术进一步验证该基因在番茄中的抗病功能,观察沉默株和野生型株系接种后表型变化,利用台盼蓝和DAB染色法检测植株产生过敏性坏死和H₂O₂的能力,并检测ShARPC5沉默后一些与植物抗病相关标记基因的表达变化。采用农杆菌浸花法遗传转化拟南芥过表达ShARPC5植株,观察转基因和野生型株系接种后表型变化,并统计单病斑分生孢子数。【结果】从番茄品种LA1777中克隆到ShARPC5,编码132个氨基酸残基,包含一个保守的P16-Arc结构域。与番茄MM-白粉菌亲和互作相比,非亲和互作的番茄品种LA1777在接种白粉菌后,ShARPC5显著上调表达,尤其在接种后18 h。在番茄上沉默ShARPC5能够增加植株对白粉菌On-Lz的敏感性,防卫反应基因PR1b1显著下调表达。组织学观察显示与对照植株相比,ShARPC5沉默植株接种后诱导产生过敏性坏死和活性氧减少。在烟草上瞬时过表达ShARPC5能够诱导产生坏死斑。相反,在拟南芥上过表达ShARPC5能够增加植物的抗病性。【结论】ShARPC5是番茄响应白粉菌侵染的重要基因,可减轻番茄白粉病的发病程度,在番茄抗白粉病机理研究方面具有较大的应用价值,可作为番茄抗白粉病分子育种的一个候选基因。     

巴西橡胶树ADF6基因的克隆与表达分析

肌动蛋白解聚因子(Actin Depolymerizing Factor,ADF)是一种重要的肌动蛋白结合蛋白。ADF通过参与调控肌动蛋白的装配和解聚在多种生理过程中发挥重要作用。本研究通过RT-PCR技术从橡胶树胶乳中获得HbADF6基因的cDNA和基因组序列,序列分析显示HbADF6基因的开放阅读框为441 bp,共编码146个氨基酸,基因组序列由2个内含子和3个外显子组成。实时荧光定量PCR结果表明,HbADF6基因在所有检测组织中均表达,其中树皮中表达量最高,叶片中表达量最低。HbADF6基因的表达受乙烯利(ET)和碘化钾(KI)调控,并与排胶时间和死皮有关。此结果表明HbADF6基因可能在橡胶树乙烯响应、死皮和排胶过程中发挥重要作用。      

小麦生理型雄性不育系微丝骨架和胼胝质的变化与其相关基因的表达分析

【目的】研究生理型雄性不育小麦花粉细胞内微丝和胼胝质的结构及其相关基因的表达,并揭示其与生理型雄性不育的关系,为进一步研究化学杂交剂SQ-1诱导小麦生理型雄性不育的机理提供一定的理论依据。【方法】以化学杂交剂SQ-1诱导的生理型雄性不育系ms(A)-西农1376及对应正常可育系(A)-西农1376为试材,用TRITC-phalloidin标记细胞内微丝,苯胺蓝标记胼胝质,qRT-PCR技术分别对肌动蛋白解聚因子TaADF（Actin depolymerizing factor）、类葡聚糖合成酶TaGSL（Glucan synthase-like）进行差异表达分析。【结果】(1)在减数分裂前期Ⅰ、中期Ⅰ、后期Ⅰ这三个时期,生理型雄性不育系花粉细胞的微丝结构与可育系没有显著差异：前期Ⅰ,微丝分布于整个细胞质中,细胞核区域也可见少量微丝环绕细胞核;中期Ⅰ,微丝分布在细胞质中,在形成纺锤体部位染色更深,形成纺锤体微丝,由细胞两极发出的纺锤体微丝伸向赤道板;后期Ⅰ,在向两极移动的染色体的中间部位染色较深,微丝分布较多。(2)在早末期Ⅰ,与可育系相比,不育系花粉细胞没有形成清晰且明显可见的中国灯笼状成膜体微丝结构,且在细胞中线部位亦没有清晰可见的微丝累积。(3)晚末期Ⅰ,可育系花粉细胞在形成细胞板的部位是线性的、平滑的,成膜体微丝消失,而不育系花粉细胞在形成细胞板的部位形成了很大的缝隙,同时,可育系胼胝质在细胞板处的沉积比较平滑,而不育系胼胝质在细胞板处的沉积较可育系相比缺乏,并且是褶皱的、有裂纹的。(4)四分体时期,可育系花粉可见围绕细胞核的辐射状微丝,不育系花粉细胞中微丝呈模糊状态,并且不育系中胼胝质染色的整体荧光强度较可育系减弱。利用实时荧光定量PCR技术分析肌动蛋白解聚因子TaADF和类葡聚糖合成酶TaGSL在减数分裂期的相对表达量,结果发现,不育系中TaADF的相对表达量是可育系的4.28倍,由于TaADF表达量上调,加剧了细胞内微丝解聚,微丝结构受到破坏,同时不育系中TaGSL表达量下降,只有可育系的0.83倍,胼胝质的沉积也受到影响。【结论】TaADF在不育系中上调表达,破坏了细胞内微丝的正常结构,使微丝不能正常行使其功能,进而可能导致花药发育中与育性相关的某些代谢通路等受到影响。与此同时,微丝结构的破坏导致细胞板形成出现异常也可能是引起胼胝质在细胞板处沉积受到影响的一个重要原因。因此,微丝和胼胝质的异常变化与化学杂交剂SQ-1诱导的生理型雄性不育密切相关。     

西伯利亚白刺肌动蛋白基因的分离与特性分析

利用兼并PCR及RACE技术克隆了西伯利亚白刺的肌动蛋白基因(Nitraria sibirica Actin, NsAct),并对其基因结构和表达特性进行了分析。所克隆的NsAct cDNA全长序列为1 831 bp,包含1 134 bp的开放阅读框,编码377个氨基酸;基因组DNA全长序列为2 913 bp,包含5个外显子和4个内含子。系统进化分析结果显示,NsAct与其他植物的肌动蛋白基因具有较高的同源性,与芒果(无患子目)亲缘关系最为接近。基因表达特性分析的结果显示,该基因在根、茎、叶中的表达量基本一致;在干旱、盐、低温及外源脱落酸胁迫下,表达量无明显变化,这些结果验证了该基因作为分子内标的可靠性。     

13种植物actin基因的密码子使用特性分析

[目的]分析13种植物actin基因的密码子组成、密码子偏性及聚类关系,了解其密码子使用模式及影响密码子使用的因素,为深入研究分子进化及物种进化提供参考.[方法]运用CodonW 1.4.4软件分析13种植物的肌动蛋白基因(actin)密码子组成及使用参数,并对影响密码子偏性的因素进行研究.应用MEGA 4.1对13条基因的CDS序列进行聚类分析,采用SPSS 20.0进行密码子偏性的聚类分析.[结果]双子叶植物中actin基因的GC含量为45.0%~51.2%、GC3s含量为36.3%~53.8%,单子叶植物中GC含量为53.0%~58.3%、GC3s含量为60.9%~75.8%;actin基因在单子叶植物中偏爱G/C结尾的密码子,双子叶植物中偏爱A/T结尾的密码子.GC和GC3s与有效密码子数(ENC)呈极显著负相关(P<0.01),相关系数均为-0.906.ENC绘图分析结果表明,actin基因密码子偏性同时受突变和选择压力影响,单子叶植物受选择压力影响的程度大于双子叶植物.基于actin基因密码子偏性的聚类将单子叶植物高粱、玉米聚为一类,水稻、大麦、竹聚为一类,8种双子叶植物聚为一类.[结论]actin基因密码子偏性与碱基组成密切相关,其密码子偏性在单、双子叶植物间存在差异,依据密码子偏性的聚类能在一定程度上反映物种间的亲缘关系.     

Thermal stability of carp G-actin monitored by loss of polymerization activity using an extrinsic fluorescent probe

ABSTRACT:   The thermal stability of carp G-actin was investigated by monitoring loss of actin polymerization ability. To determine the amount of native actin remaining after heat treatment, actin was labeled with a fluorescence reagent, N-(1-pyrene)iodoacetamide. The loss of polymerization ability of carp actin during heat treatment, at between 45 and 55°C, occurred faster than that of chicken actin. The inactivation rate was influenced by concentrations of ATP and Ca²⁺ in solution. With the increase of Ca²⁺ concentration, the inactivation of carp actin was markedly suppressed. Furthermore, the activation energy of the inactivation of carp actin obtained from an Arrhenius plot was similar to that of chicken actin. These results indicated that the thermal instability of carp G-actin was due to the low affinites of ATP and Ca²⁺ for carp actin described in a previous report.     

Dynamics of Actin Polymerization

The process of actin polymerization and depolymerization have some relation with its function,the activation of such process is compatible to its functions. The polymerization progress is divided into four steps: The first step is the activation of the monomer actin. The nucleation of actin nucleus forms in the second step which limits the polymerization speed. The elongation of the F-actin filaments happens in the following step. In the last step, a steady-state is attained, the length of the filament does not change because the polymerizing rate in the barbed end is the same with the depolymerizing rate in the pointed end. Some factors which affect the polymerizing process, such as nucleotide, actin related proteins are discussed. The aim is to know more about how to assemble the complicated system with biomacromolecule and what to function.     

捻转血矛线虫肌动蛋白基因的克隆与表达及其DNA疫苗的构建

根据秀丽新杆线虫等其他几种线虫的肌动蛋白(Actin)开放阅读框(ORF)设计简并引物,以捻转血矛线虫总RNA为模板,合成cDNA,用RT-PCR方法扩增出约为1 100 bp的DNA片段。将该片段克隆到T载体后进行序列测定和分析,结果表明该基因的ORF为1 131 bp,与秀丽新杆线虫、新杆状线虫、肿孔古柏线虫等的同源性高达86%以上,推导出其蛋白质序列含有376个氨基酸,与胎生网尾线虫、秀丽新杆线虫、新杆状线虫、马来丝虫等的肌动蛋白相似性均为98%以上,说明成功克隆了捻转血矛线虫actin基因。将捻转血矛线虫肌动蛋白基因的ORF克隆到pET-28a(+)中,构建了原核表达载体,用IPTG进行诱导表达。SDS-PAGE分析发现,该基因获得了表达,且以包涵体的形式存在,融合蛋白相对分子质量约46×103。以此重组蛋白为抗原,用自然感染捻转血矛线虫山羊血清为第一抗体进行Western blot分析,结果出现1条特异性条带,表明捻转血矛线虫Actin蛋白在自然感染过程中能被宿主的免疫系统识别,可能是一种天然抗原。用纯化重组Actin蛋白免疫小鼠,制备抗血清,以该血清为第一抗体进行Western blot,结果发现该血清能识别捻转血矛线虫成虫蛋白谱中相对分子质量约为42×103的蛋白条带。将捻转血矛线虫actin基因亚克隆到真核表达载体pVAX1中,构建了DNA疫苗pVAX1-ACT,动物免疫试验结果表明该DNA疫苗在机体内获得了表达。     

Laryngeal rhabdomyoma in a dog

A 3‐year‐old, female spayed Australian Shepherd dog was presented to Veterinary Healthcare Associates in Winter Haven, FL with a history of respiratory stridor, difficulty swallowing, and a change in bark for approximately 3 months. Radiographs revealed a soft tissue mass caudal to the epiglottis. Oral and computerized tomographic (CT) examinations were performed under general anesthesia and revealed a small firm mass in the caudal larynx on the right side. Cytologic evaluation of a fine‐needle aspirate of the mass revealed cells consistent with a rhabdomyoma, oncocytoma, or granular cell tumor. Histopathologic interpretation was rhabdomyoma or oncocytoma. Histochemical staining with periodic acid‐Schiff was mostly negative with a low number of weakly positive cells and with phosphotungstic acid‐hematoxylin was strongly positive with visible cross striations. Tumor cells did not express pancytokeratin AE1/AE3, were strongly immunoreactive for myoglobin and muscle‐specific actin, and did not express vimentin except for a low number of weakly immunoreactive cells. These findings confirmed a diagnosis of rhabdomyoma. Primary neoplasia of the larynx is rare, and widely varying types of neoplasms have been documented in this location. Due to the cytologic and histologic similarities between rhabdomyoma, oncocytoma, and granular cell tumor, these neoplasms should be differentiated using histochemical staining and immunohistochemical analysis.     

Muscle protein expression of pikeperches (Stizostedion lucioperca and S. volgense)

The purpose of the present study was to investigate the muscle protein expression in two pikeperches (Stizostedion lucioperca and S. volgense) through intra‐ and intermyomeric composition of white muscles. Using denaturing 10% sodium dodecylsulfate‐polyacrylamide gel electrophoresis, muscle protein expression was studied in relation to within‐ and between‐species morphological development, sex, maturity and age of pikeperches. Myosin, actin and troponin have a distinct role in the contraction and length tension of muscle fibers of these species. No obvious intramyomeric differences were found in the myosin heavy chain of both species. Myosin light chains (15–38 kDa) have different expression in different age groups. The muscle protein of the fingerling and adult S. lucioperca had high molecular weight (50 kDa) myosin in contrast to the other Percid species. The molecular weight of actins increased comparatively in low‐age‐group fish. ATP is stored in myosin and released to cause contraction when myosin comes in contact with actin of the experimental fish. Troponin regulates increasing concentration of light‐chain myosin in mature fish. Because troponin T has been implicated in the regulation of skeletal muscle kinetics, muscle contraction kinetics was predicted in different age groups. The muscle proteins of both sexes of these species have polymorphism in various age groups but have no difference in similar aged fish. No muscle protein dimorphism was found in these Percid species. The white muscle protein composition and contractile properties affect power production during fast, unsteady movement and swimming.