Genome-wide association analysis for stripe rust resistance in spring wheat(Triticum aestivum L.) germplasm

Stripe rust is a continuous threat to wheat crop all over the world. It causes considerable yield losses in wheat crop every year. Continuous deployment of adult plant resistance(APR) genes in newly developing wheat cultivars is the most judicious strategy to combat this disease. Herein, we dissected the genetics underpinning stripe rust resistance in Pakistani wheat germplasm. An association panel of 94 spring wheat genotypes was phenotyped for two years to score the infestation of stripe rust on each accession and was scanned with 203 polymorphic SSRs. Based on D' measure, linkage disequilibrium(LD) exhibited between loci distant up to 45 c M. Marker-trait associations(MTAs) were determined using mixed linear model(MLM). Total 31 quantitative trait loci(QTLs) were observed on all 21 wheat chromosomes. Twelve QTLs were newly discovered as well as 19 QTLs and 35 previously reported Yr genes were validated in Pakistani wheat germplasm. The major QTLs were QYr.uaf.2 AL and QYr.uaf.3 BS(PVE, 11.9%). Dissection of genes from the newly observed QTLs can provide new APR genes to improve genetic resources for APR resistance in wheat crop.     

Pseudomonas putida improved soil enzyme activity and growth of kasumbha under low input of mineral fertilizers

Effective management of the nutrients and enzyme activity in the soil is necessary for maximum crop growth and productivity. However, the excessive use of chemical fertilizers (CFs) not only adversely affects the soil nutrient status and soil physicochemical properties but also aids pollution to the ecosystem. The objective of present study was to investigate the effect of single as well as combined applications of phosphate-solubilizing bacteria and agrochemicals on important soil enzyme activities and their impact on the growth of kasumbha (safflower). Pseudomonas putida (P. putida;10⁶ cells/mL) was applied as seed inoculation prior to sowing, and CFs were applied as full, half, and quarter doses during sowing to modulate the growth of kasumbha host plants. P. putida in combination with half dose of CFs (PH) increased the soil urease and phosphatase activities, while P. putida combined with quarter dose of CFs (PQ) augmented the soil invertase activities. Moreover, the PQ treatment exhibited the maximum colony-forming units of P. putida. Leaf chlorophyll, carotenoids, protein contents, and root lengths were increased by PH treatment. Whereas, shoot length and leaf area were improved by PH and PQ treatments, respectively. Leaf protease activity was enhanced by P. putida in combination with full dose of CFs and PQ treatments, while leaf phosphate contents were significantly improved by PQ treatment. It can be concluded that P. putida in combination with half as well as quarter doses of CFs is a promising approach for the improvement of soil enzyme activities and growth of kasumbha and replacing 50% of the use of CFs.     

Phytosequestration of Metals in Selected Plants Growing on a Contaminated Okhla Industrial Areas, Okhla, New Delhi, India

Contamination of metal ions in soil and water represents more pressing threats to resources as well as human health. The present research was carried out to screen the phytosequester plants growing in industrial waste- and wastewater-affected industrial areas of Okhla, New Delhi, India. Accumulation trend of metal Fe, Zn, Cu, Cr, Pb, Cd, Hg, and As from soil and wastewater by plants were collected for study. Among aquatic plants Hydrilla verticillata, Marsilea quadrifolia, and Ipomea aquatica were found to be highest metals accumulator, Eclipta alba and Sesbania cannabina among terrestrial plant were highest accumulator of metals. Among the algal spp. Spirulina platensis and Phormidium papyraceum were the most efficient in accumulating Cd and Hg. The maximum bioconcentration factor (BCF) was recorded in Hygroryza aristata for the metals (Hg, Cd) in M. quadrifolia (Cd, Cr), in E. alba (Cr, Cu), and in S. platensis (Hg, Pb). However, the translocation factor (TF) of metals was found more in M. quadrifolia followed by I. aquatica than other plants. Among all the plants, H. verticillata showed high TF and low BCF values for toxic metals (Pb, Cr) and was suitable for phytostabilization of these metals. Our study showed that native plant species growing on contaminated sites may have a potential of phytosequestration of these metals.     

FTIR spectroscopy, chemical and histochemical characterisation of wood and lignin of five tropical timber wood species of the family of Dipterocarpaceae

The goal of this study was to characterise chemical and histochemical properties of five dipterocarp timber wood species (Dipterocarpus kerrii, Hopea plagata, Parashorea malaanoman, Shorea almon, and Shorea contorta) differing in wood service life and utilisation. Wood of H. plagata, the most durable species, contained the lowest concentrations of nitrogen and ligno-protein, the highest C/N ratio and the lowest lignin concentration per dry mass but the highest lignin and extractive concentrations per wood density. FTIR spectroscopic studies of wood and isolated lignins of D. kerrii and H. plagata revealed differences compared to P. malaanoman and Shorea sp., which are species with short service life. Lignins of the Shorea/Parashorea species had a higher G/S ratio than those of H. plagata and D. kerrii. This was also evident from histochemical staining. Principle component analysis of FTIR spectra identified differences in both lignin composition and ligno-protein content as major source of variation.