Chemometric Methods to Predict of Pb in Urban Soil from Port Pirie,South Australia,using Spectrally Active of Soil Carbon

A total of 73 soil samples were initially analyzed for lead (Pb) concentration as an indicator of the environment impact of smelter activity in the Port Pirie, South Australia. Chemometric techniques were used to assess the ability of near-infrared (NIR) reflectance spectroscopy to predict soil Pb using spectrally active soil characteristics such as soil carbon (C). The result indicated a strong linear relationship between log-transformed data of soil Pb and spectral reflectance in the range between 500 and 612 nm with R² = 0.54 and a low root-mean-square error (RMSE_v = 0.38) for the validation mode with an acceptable ratio of performance to deviation and ratio of error range (1.6 and 7.7, respectively). This study suggested that NIR spectroscopy based on auxiliary spectrally active components is a rapid and noninvasive assessment technique and has the ability to determine Pb contamination in urban soil to be useful in environmental health risk assessment.     

Testis-specific histone variants H2AL1/2 rapidly disappear from paternal heterochromatin after fertilization

Before fertilization, the genome packaging of male and female gametes is very different. Indeed, whereas the female haploid genome is associated with histones in a somatic-like chromatin structure, most of the male genome is tightly bound to protamines. However, it has recently been demonstrated that the pericentric heterochromatin regions of the male genome are associated with specific H2A-like histone variants, named H2AL1 and H2AL2, suggesting a heterogeneous organization. The fate and role of the sex-specific genome packaging transmitted by germinal cells to the embryo are not well understood. The aim of the present study was to follow reprogramming of the parental genomes in early embryos after in vivo fertilization. We show here that two typical epigenetic markers, trimethylated lysine 9 of histone H3 (TriMethylH3K9) and acetylated H4, are asymmetrically distributed between the parental genomes in one-cell mouse embryos, confirming data from embryos obtained after intracytoplasmic sperm injection (ICSI) or in vitro fertilization (IVF). Indeed, whereas the maternal genome is highly enriched with trimethylH3K9, this mark is not detected in the paternal genome. On the contrary, histone H4 incorporated in the paternal genome is highly acetylated at an early stage, while in the maternal pronucleus, the level of acetylated H4 remains low in early one-cell embryos and becomes enriched at a later stage. Moreover, our results suggest a very quick disappearance of histone H2A variants H2AL1 and H2Al2 from the paternal pericentric heterochromatin regions after sperm-egg fusion.     

SUMO1 haploinsufficiency leads to cleft lip and palate

The posttranslational modification sumoylation can have multiple effects on its substrate proteins. We studied a patient with isolated cleft lip and palate and a balanced chromosomal translocation that disrupts the SUMO1 (small ubiquitin-related modifier) gene, resulting in haploinsufficiency. In mouse, we found that Sumo1 is expressed in the developing lip and palate and that a Sumo1 hypomorphic allele manifests an incompletely penetrant orofacial clefting phenotype. Products of several genes implicated in clefting are sumoylated, and the Sumo1 hypomorphic allele interacts genetically with a loss-of-function allele for one of these loci. Thus, sumoylation defines a network of genes important for palatogenesis.     

Moroccan crustal response to continental drift

The refercnce to Bouguer anomalies in the caption to Fig. 2 of the report by W. H. Kanes et al. (Science, 1 June 1973, p. 950) is in error. Isostatic anomalies are meant.-Ed.     

Use of ITS nuclear sequences from Phelipanche aegyptiaca as a direct tool to detect single seeds of broomrape species in the soil

Broomrape (Phelipanche and Orobanche spp.) are obligate holoparasites that attack roots of almost all economically-important crops in semiarid regions of the world. Broomrape seeds are extremely small (dust-like seeds), averaging 200 to 300?μm in size and because of the miniscule seed size it is difficult to detect and confirm via conventional methods. In this study our aim was to develop a PCR-based assay specific for broomrape soil-borne seeds and sensitive enough to detect a single or few broomrape seeds in a soil sample. For this purpose, we used complementary polymerase chain reaction (PCR) primers based upon unique sequences in the internal transcribed spacer (ITS) regions of the nuclear ribosomal DNA of Phelipanche aegyptiaca. Genomic DNA was extracted from soil samples artificially infested with broomrape seeds or tissue of Phelipanche aegyptiaca Pers., Orobanche cumana Wallr. and Phelipanche crenata Forsk. and subjected to PCR analysis. Using ITS-350 primers, a specific PCR product (350?bp) was amplified and detected in all samples containing broomrape species, but was not detected in soil sample free of broomrape seeds or tissues. Additionally, the PCR-based assay was sensitive enough to detect even a single broomrape seed in the soil. As expected the universal internal control primers amplified a PCR product (555?bp) of genomic DNA extracted from soil samples with or without broomrape tissues or seeds. This diagnostic method is simple, reliable and rapid and could help for assessment of broomrape seed contamination in a crop field.     

Compost suppressiveness against Fusarium oxysporum was not reduced after one-year storage under various moisture and temperature conditions

The effect of storage conditions on compost suppressiveness against fusarium wilt of melon, caused by Fusarium oxysporum f. sp. melonis (FOM) was studied in relation to the dynamics of compost microbial activity and biodegradability. For this purpose, mature suppressive compost, prepared from tomato plants and separated cow manure, was divided into four portions and stored for one year under cool/warm (12 or 28 °C) or dry/wet (15-35 or 55-65% moisture content) conditions, in four different combinations: cool-dry, warm-dry, cool-wet and warm-wet. All composts retained and even enhanced their suppressive capacity during storage, with no significant differences among them by the end of the storage period. However, significant differences were found in the dynamics of some of the measured chemical and microbial properties. The microbial activity of composts stored under wet conditions was higher than that of those stored under dry condition, which resulted in a substantial decrease in dissolved organic matter content (expressed as dissolved organic carbon; DOC) and increase in its recalcitrance to biological degradation, decrease in basal heat emission, slower response to added glucose or citric acid, and higher NO₃ concentration, indicating increased nitrification under wet conditions. The DOC significantly correlated with several microbial properties as well as with compost suppressiveness of fusarium wilt of melon seedlings, and may be regarded as a most suitable general index for compost maturity. A best-subset multiple linear regression analysis revealed that the three best predictors, namely dissolved organic carbon (DOC), basal heat, and mesophilic bacterial counts, could explain as much as 83% of the total variance in compost suppressiveness. The generally agreed association between compost maturity and suppressiveness was verified in this case. It appears that compost microbial populations might compete and interfere with the saprophytic stage of FOM conidia, between germination and host invasion. In conclusion, it was demonstrated that compost suppressiveness against fusarium wilt of melon can be maintained for at least one year under a wide range of storage conditions, without any loss of suppressive capacity. This fact has positive logistical implications for the use of suppressive composts against FOM.     

Tracing Organic Footprints from Industrial Effluent Discharge in Recalcitrant Riverine Chromophoric Dissolved Organic Matter

Excitation?Cemission matrix fluorescence spectroscopy, combined with parallel factor analysis and measurements of UV absorption and dissolved organic carbon (DOC) concentrations, was used to trace the footprints of industrial effluents discharged into the lower Kishon River (Israel). The lower Kishon River typifies streams that are affected by seawater tidal intrusion and represents an extreme case of severe long-term pollution caused mainly by a variety of industrial effluents. The industrial effluents may contribute about 90%, in terms of biochemical oxygen demand, of the total organic carbon discharged into the lower Kishon River. Water samples were collected along the river, including the points of effluent discharge from industrial plants, between November 2005 and September 2006. Two types of fluorescent components characterized the fluorescence of the lower Kishon River water: component I corresponded to humic-like matter and component II spectrally resembled material known to be associated with biological productivity, but different from typical tryptophan-like fluorophore. These fluorescent components and other substances that absorbed light at 254 nm contributed to the DOC pool that resisted riverine microbial degradation under laboratory conditions, and that constitutes up to 70% of the overall riverine DOC. The variations in DOC concentration, absorbance at 254 nm, and concentration of humic-like matter (characterized by component I) correlated with the distance from the sea and the water electrical conductivity, and were linked to seawater tidal intrusion. The increased concentration of component II, as well as its enlarged fraction in the overall riverine DOC pool, was found to be associated with the location of major inputs of the industrial effluents. These findings support the use of this fluorescent component as an indicator of industrial pollution in such severely contaminated riverine systems.     

Moroccan crustal response to continental drift

The formation and development of a zone of spreading beneath the continental crust resulted in the breakup of Pangea and formation of the Atlantic Ocean. The crust of Morocco bears an extremely complete record of the crustal response to this episode of mantle dynamics. Structural and related depositional patterns indicate that the African margin had stabilized by the Middle Jurassic as a marine carbonate environment; that it was dominated by tensile stresses in the early Mesozoic, resulting in two fault systems paralleling the Atlantic and Mediterranean margins and a basin and range structural-depositional style; and that it was affected by late Paleozoic metamorphism and intrusion. Mesozoic events record the latter portion of African involvement in the spreading episode; late Paleozoic thermal orogenesis might reflect the earlier events in the initiation of the spreading center and its development beneath significant continental crust. In that case, more than 100 million years were required for mantle dynamics to break up Pangea.     

Aetiology and causal agents of mango sudden decline disease in the Sultanate of Oman

Mango sudden decline is a recently introduced, economically serious disease in Oman. Affected mango trees have wilting symptoms that usually begin on one side and later spread to involve the entire tree. Trees exude amber-coloured gum from the bark of their trunks or branches and vascular tissues are discoloured. Having entered Oman in the recent past, survey data is presented that shows the disease to have spread throughout the northern part of the country. Evidence is presented that the vascular wilt pathogen Ceratocystis fimbriata causes mango sudden decline disease in Oman, possibly in concert with Lasiodiplodia theobromae and the recently described Ceratocystis omanensis. Isolates of these fungi from affected trees, cause infection and can be recovered from inoculated seedlings. Bark beetles (Hypocryphalus mangiferae) are shown to carry C. fimbriata and L. theobromae and are presumably responsible for transmitting both pathogens to healthy mango trees. Acting as a wounding agent and vector, the bark beetle is likely to have assisted the rapid spread of the disease across Oman.