Isolating the effect of soil properties on agricultural soil greenhouse gas emissions under controlled conditions

Agricultural soils are important sources of greenhouse gases (GHGs). Soil properties and environmental factors have complex interactions which influence the dynamics of these GHG fluxes. Four arable and five grassland soils which represent the range of soil textures and climatic conditions of the main agricultural areas in the UK were incubated at two different moisture contents (50 or 80% water holding capacity) and with or without inorganic fertiliser application (70 kg N ha⁻¹ ammonium nitrate) over 22 days. Emissions of N₂O, CO₂ and CH₄ were measured twice per week by headspace gas sampling, and cumulative fluxes were calculated. Multiple regression modelling was carried out to determine which factors (soil mineral N, organic carbon and total nitrogen contents, C:N ratios, clay contents and pH) that best explained the variation in GHG fluxes. Clay, mineral N and soil C contents were found to be the most important explanatory variables controlling GHG fluxes in this study. However, none of the measured variables explained a significant amount of variation in CO₂ fluxes from the arable soils. The results were generally consistent with previously published work. However, N₂O emissions from the two Scottish soils were substantially more sensitive to inorganic N fertiliser application at 80% water holding capacity than the other soils, with the N₂O emissions being up to 107 times higher than the other studied soils.     

Historical changes in land use influence current habitat preferences of large herbivores

Landscape Ecology - Predicting habitat use patterns is a key issue in the management of large herbivore populations. Particularly, indicators providing a model of the spatial distribution of a...     

Immunostimulatory effects of dietary poly‐β‐hydroxybutyrate in European sea bass postlarvae

The stable production of high‐quality fry in marine aquaculture is still hampered by unpredictable mortality caused by infectious diseases during larval rearing. Consequently, the development of new biocontrol agents is crucial for a viable aquaculture industry. The bacterial energy storage compound poly‐β‐hydroxybutyrate (PHB) has been shown to exhibit beneficial properties on aquatic organisms such as enhanced survival, growth, disease resistance and a controlling effect on the gastrointestinal microbiota. However, the effect of PHB on the developing immune system of fish larvae has so far not been investigated. In this study, the effect of feeding PHB‐enriched Artemia nauplii on survival, growth and immune response in European sea bass (Dicentrarchus labrax) postlarvae was examined. Amorphous PHB was administered to 28‐day‐old sea bass postlarvae over a period of 10 days. The survival and growth performance were monitored, and the expression of 29 genes involved in immunity, growth, metabolism and stress‐response was measured. While the expression of the insulin‐like growth factor 1 (igf1), an indicator of relative growth, was upregulated in response to feeding PHB, the larval survival and growth performance remained unaffected. After 10 days of PHB treatment, the expression of the antimicrobial peptides dicentracin (dic) and hepcidin (hep) as well as mhc class IIa and mhc class IIb was elevated in the PHB fed postlarvae. This indicates that PHB is capable of stimulating the immune system of fish early life stages, which may be the cause of the increased resistance to diseases and robustness observed in previous studies.     

Effect of Growth Regulators and Ethanol on Termination of Dormancy in Potato Tubers

The main objective of this study was to find the best practice of inducing the sprouting of dormant potato tubers. We compared two protocols of breakage of dormancy, which are based on dipping excised potato eyes in an aqueous solution of gibberellic acid (GA₃) and kinetin (standard 1) or in the aqueous solution of GA₃, thiourea, and daminozide (standard 2), with a newly reported approach based on ethanol. We tested the effect of ethanol alone or in combination with GA₃ and/or kinetin on dormancy release and sprouting of the potato tubers. As a model, we used two potato genotypes (cultivars Pasat and Dorota), with long dormancy of 5 and 10 weeks respectively. We showed that the standard 2 was the most effective treatment both for dormancy breaking and in promoting sprout growth, especially for cv. Dorota, for which the treatment induced 82.3% of tuber eye-plugs to sprout 28 days after treatment and to produce 93.2% of emerged plants after subsequent 28 days of cultivation in the greenhouse. For this cultivar, similar efficacy was observed for the combination of 4% ethanol with GA₃ and kinetin. The same concentration of ethanol combined with GA₃ but without kinetin was the most efficient treatment for breaking dormancy of cultivar Pasat. However, the difference between the various treatment combinations was statistically insignificant. Ethanol alone or in combination with kinetin poorly induced breakage of dormancy, confirming the main role of GA₃ in artificial dormancy breaking. Thus our study showed that the standard 2 is the most effective approach for breakage of dormancy at least with long term-dormancy cultivars.     

Combined effects of water temperature and daily food availability period on the growth and survival of tench (Tinca tinca) larvae

A 16‐day experiment was designed to find the best combination of water temperature (27, 30, 33°C) and daily duration of food availability (12, 18, 24 h) for larval tench (Tinca tinca) growth and survival. Larvae with an initial mean size of 5.7 mm total length (TL) and 0.7 mg wet body weight (BW) were stocked at 15 L^?1. Larvae were fed in excess with live Artemia nauplii with the period of food availability lasting 12, 18 or 24 h daily. The largest final larval size was recorded at 27 and 30°C in groups fed for 24 h a day (17.7 and 17.9 mm TL, 76.1 and 77.7 mg BW, respectively). The combination of the highest temperature and the longest daily food availability was the only set of conditions under which final larval survival was affected (95.4% survival; 98.7–99.9% under all other conditions). The combination of water temperature of about 28.6°C and continuous food availability is recommended as the optimum combination for rearing T. tinca larvae under controlled conditions. Providing continuous food supply to fish larvae under aquaculture conditions was also advantageous in helping to mitigate the effects of slower growth relative to developmental progress, which can occur at high water temperatures. However, should one wish to limit the daily feeding period to 12 h per day, the use of a water temperature between 27.4 and 27.9°C would be the best solution.     

Aphanomyces astaci presence in Japan: a threat to the endemic and endangered crayfish species Cambaroides japonicus?

1. Spread of the crayfish plague pathogen, Aphanomyces astaci, by North American crayfish species is considered one of the main reasons for substantial declines and local extinctions of native European crayfish populations. Owing to human introductions, several American crayfish species have become established throughout the world, and thus pose a potential threat to indigenous crayfish populations susceptible to crayfish plague.
2. In Japan, two such widespread alien species, Procambarus clarkii and Pacifastacus leniusculus, were introduced for aquaculture purposes in the late 1920s and since then successfully expanded their ranges.
3. Aggressive interactions with alien crayfish along with habitat modifications have been considered primarily responsible for drastic declines in populations of the Japanese endemic crayfish, Cambaroides japonicus, observed in the last few decades. However, the presence of the crayfish plague pathogen, to which Japanese crayfish are susceptible, may be expected, and could contribute to these declines.
4. Only recently, A. astaci has been reported from Taiwan, and to our knowledge no study focusing on its presence outside of the Western Palearctic has been conducted.
5. To fill this gap, 54 P. clarkii and 47 P. leniusculus individuals from five different Japanese locations were screened using molecular methods recommended by the World Organization for Animal Health. Aphanomyces astaci DNA was detected in all studied populations, altogether in 61% and 21% of examined individuals of P. clarkii and P. leniusculus, respectively.
6. The results provide the first evidence of A. astaci presence in Japan and highlight the threat of pathogen transmission to C. japonicus populations.

Copyright © 2016 John Wiley & Sons, Ltd.     

Sediment load variability in response to climate and land use changes in a Carpathian catchment (Raba River,Poland)

Journal of Soils and Sediments - This study analyzes the variability of sediment loads under variant climate change and land use scenarios in a Carpathian catchment with a dam reservoir. The areas...     

Challenges of thermal nociceptive threshold testing in the donkey

ObjectiveTo evaluate a thermal nociceptive threshold (TNT) testing device in the donkey, and the influence of potential confounding factors on TNTs.AnimalsTwo groups (Group 1 and Group 2) of eight castrated male donkeys aged 4–9 years, weighing 105–170 kg.MethodsTNTs were measured by heating a thermal probe on skin until an end-point behaviour (threshold temperature) or a cut-out temperature (51 °C) was reached. The withers and the dorsal aspect of the distal limb were used as sites for TNT testing. The effects on TNT of different confounding factors: the limb tested; rate of heating; and ambient temperature were evaluated. Data were analyzed using general linear models, and Mann-Whitney tests, p < 0.05 was considered significant.ResultsEnd-point behaviours (skin twitch or donkey looking at test device) when the thermal probe heated the withers were observed in approximately half of tests. TNT was (mean ± SD) 46.8 ± 2.85 °C. Subsequently the limb was evaluated as the test site in Group 1 followed by Group 2 donkeys; end-point behaviour being a foot-lift. In Group 1, 72% of tests ended in an end-point behaviour but the response rate was lower in Group 2 (20%), although TNTs were similar [(47.6 ± 3.3) and (47.3 ± 3.0) °C respectively] for responding animals. Rate of heating, ambient temperature and laterality (right or left) did not affect thresholds, but mean TNT was significantly higher in the forelimb (48.5 ± 2.8 °C) than the hind limb (47.4 ± 2.8 °C) (p = 0.012).ConclusionsWhen a thermal probe cut-out temperature of 51 °C was used in TNT testing in the donkey a high proportion of tests did not produce an identifiable end point behaviour. Higher cut-out temperatures damaged the skin. Under these conditions, thermal nociceptive threshold testing appears not be an appropriate analgesiometry technique in the donkey.Clinical relevanceTNT testing under these conditions is not suitable form of analgesiometry for donkeys.