重庆市不同规模灌区农灌水有效利用系数测算与对比研究

通过对重庆市不同规模灌区农田灌溉用水有效利用系数计算结果的比较研究,对出现的中型灌区农田灌溉用水有效利用系数大于小型灌区的结果进行合理性分析,并为重庆市农田灌溉用水有效利用系数的进一步提高,提出相关建议,为政府相关部门的科学决策提供参考.综合考虑重庆的地形、气候、土壤等因素.根据选定灌区的实测数据,采用首尾测算法计算2017年重庆市不同规模灌溉农田灌溉水的有效利用系数,采用单因素和主成分分析法,分析影响农田灌溉水有效灌溉系数的主要因素. 1)通过测算, 2017年重庆市中型灌区农田灌溉水有效利用系数为0.499,小型灌区为0.487,推算全市为0.495; 2)在影响农田灌溉水有效利用系数的主要因素中,当地的节水工程和管理状况所占的比例大于自然因素; 3)中型灌区在节水工程的投资、管理和维护等方面均优于小型灌区; 4)自然因素中,降水量对农田灌溉水有效利用系数具有一定的负面影响.     

基坑监测技术及其应用研究

基坑的有效监测是保证工程建设协调进行、确保工程质量的关键。介绍基坑监测技术的内容与方法,以实例说明基坑监测在工程项目中的应用及需要注意的问题,为基坑监测工作的不断完善提供有益的建议。     

Genome-wide association study for spot blotch resistance in Afghan wheat germplasm

Spot blotch (SB), caused by Bipolaris sorokiniana, is a devastating disease of wheat globally, especially in South Asia and South America. Understanding the genetics of resistance to SB is important for developing breeding strategies to improve resistance. A panel of 301 genotypes from Afghanistan was phenotyped over two crop seasons using a mixture of virulent B. sorokiniana isolates and genotyped using DArTSeq to obtain genome-wide markers. Fifty genotypes (16.6%) showed disease scores less than the resistant control. Principal component analysis using the genotypic data clustered the genotypes into five different groups. Among models used for genome-wide association mapping, the multilocus mixed model, and fixed and random model circulating probability unification algorithms were most effective in identifying significant marker-trait associations (MTA). Twenty-five MTAs at p ≤ .001 were identified on chromosomes 1A, 1B, 1D, 2B, 2D, 3A, 3B, 4A, 5A, 5B, 6A, 7A, and 7D, indicating the quantitative nature of resistance to SB. Phenotypic variation explained by these markers ranged from 2.0% to 17.7%, and genomic regions on the chromosomes 1D, 2D, 3A, 3B, 4A, 5A, and 5B coincided with loci identified in previous studies. Three single nucleotide polymorphism (SNP) markers on chromosomes 1B (SNP 1113207) and 5A (SNPs 5411867 and 998276) were significant in both crop seasons as well as in the combined analysis across seasons. Marker 5411867 is close to Vrn-A1, shown to be associated with SB in previous studies. Furthermore, among known SB resistance genes, Sb2 on chromosome 5B was predicted to be significant in this panel.     

滩羊毛色的全基因组关联分析

滩羊不仅肉质鲜美,其所产的二毛裘皮在国内外也享有盛誉,毛色是滩羊重要的经济性状。为检测影响滩羊毛色的基因组区域,利用美国Affymetrix绵羊600K基因分型芯片对宁夏盐池地区具有代表性毛色的96只滩羊个体(全白、白毛黑头、白毛褐或黄头)进行基因分型,并采用Logistic回归方法进行全基因组关联分析。通过Bonferroni校正,检测到5个与毛色显著关联的SNPs。这些SNPs分别位于或邻近2个已知基因(MC1R和TCF25)。其中MC1R基因参与调控黑色素的合成,研究表明其与绵羊毛色相关。而TCF25基因与MC1R基因距离很近,可能由于存在一定程度的连锁不平衡而被鉴定到。本研究进一步解析了滩羊毛色性状的遗传机理,为滩羊毛色性状的标记辅助选育提供科学依据。     

含刚性沉水植物明渠水流结构的试验研究

【目的】得到含刚性沉水植物明渠的水流结构。【方法】采用粒子图像测速仪(PIV),用有机玻璃棒模拟刚性植物,在不同来水流量、植物密度条件下对明渠水流结构进行了试验研究。【结果】无植物时平均流速沿垂向呈对数分布规律,有植物时则呈现明显的分区分布特性。无植物时紊动强度值沿垂向变化不大,有植物时在植物顶端位置处紊动最剧烈。流量或植物密度越大,植物顶端位置的流速梯度就越大,植物层上方的流速最大值也越大。植物密度越大,植物顶端位置的紊动强度越大,植物密度对水流紊动强度由最大值减小到最小值的区域影响很大。【结论】刚性沉水植物的存在会改变水流结构,增强紊动掺混,增强流体质点交换和能量传递,且上述影响会随着流量或植物密度的增大而增强。     

Identification of potential genomic regions for egg weight by a haplotype-based genome-wide association study using Bayesian methods

ABSTRACT

1. Theoretically, haplotype blocks might be a more suitable alternative to SNP genotypes as they are usually better at capturing multi-allelic QTL effects, compared to individual SNP genotypes in genome-wide association studies. The objectives of this study were to identify genomic regions related to egg weight traits by Bayesian methods (BayesA, BayesB, and BayesN) that fit fixed-length haplotypes using GenSel software.

2. Genotypes at 294,705 SNPs, that were common on a 600K Affymetrix chip, were phased for an egg-laying hen population of 1,063 birds. Recorded traits included first egg weight (FEW) and average egg weight at 28, 36, 56, 66, 72 and 80 weeks of age.

2. Fitting 1Mb haplotypes from BayesB resulted in the highest proportion of genetic variance explained for the egg weight traits. Based on the trait, the genetic variance explained by each marker ranged from 27% to 76%.

3. Different haplotype windows associated with egg weight traits only explained a small percentage of the genetic variance.

4. The top one 1-Mb window on GGA1 explained approximately 4.05% of total genetic variance for the FEW. Candidate genes, including PRKAR2B, HMGA2, LEMD3, GRIP1, EHBP1, MAP3K7, and MYH were identified for egg weight traits.

5. Several genomic regions, potentially associated with egg weight traits, were identified, some of which overlapped with known genes and previously reported QTL regions for egg production traits.     

鸡脚重性状的全基因组关联分析

鸡(Gallus gallus)脚重性状为鸡产业中的重要经济性状.为了揭示鸡脚重性状的遗传基础,寻找可用于鸡脚改良的分子标记,本研究以核心群京海黄鸡为实验动物,测定其脚重,利用简化基因组测序技术在整个基因组范围内检测与脚重相关的SNPs.共检测到16个与脚重相关的SNPs位点,其中13个集中分布在4号染色体上72.8～77.9 Mb区域;2个SNP位点rs475641139和rs475548810达到5％ Bonferroni全基因组显著水平(P＜5.5E-07),其余位点达到全基因组潜在显著水平(P＜1.1E-05).筛选每个SNP周围1 Mb区域内的基因,共找到9个可能的候选基因,并使用基因本体论(Gene Ontology,GO)数据库对9个候选基因的细胞组分、分子功能和参与的生物学进程进行了分析.结果表明二氢蝶啶还原酶(dihydropteridine deductase,QDPR)基因、LIM域结合蛋白2(LIM domain-binding protein 2,LDB2)基因、类184B家族(family with sequence similarity 184 memberB,FAM184B)基因、复合信号免疫球蛋白J结合蛋白(recombination signal binding protein for immunoglobulin kappa J region,RBPJ)基因、纤维母细胞生长因子结合蛋白2(fibroblast growth factor-binding protein 2,FGFBP2)基因、富亮氨酸重复蛋白5(F-box and leucine-rich repeat protein 5,FBXL5)基因、胆囊收缩素受体A(cholecystokinin receptor type A,CCK1R)基因、肌动蛋白互作蛋白1 (WD repeat containing protein 1,WDR1)基因和类桶状蛋白4(tubby like protein 4,TULP4)9个基因和4号染色体72.8～77.9 Mb区域可能为影响鸡脚重性状的重要候选基因和潜在功能区域.本研究为鸡脚重性状的标记辅助选择提供了理论依据.     

哈萨克斯坦共和国冰草种质资源特性研究

对哈萨克斯坦共和国禾本科冰草属Agropyrom植物100个种质资源的适应性、生产性能及有关生物学特性进行了系统的研究。结果表明,有3个种质材料鲜干比、茎叶比、饲草产量、种子产量、开花期粗蛋白含量等综合指标高于当地大面积推广种植的品种。     

昆虫病原线虫生物防控草地贪夜蛾的室内及田间效果和影响因素

联合国粮食及农业组织2018年向全球发布草地贪夜蛾Spodoptera frugiperda是重要的预警害虫。据报道,2019年我国已有26个省（区、市）的作物受到草地贪夜蛾为害。目前已经发现草地贪夜蛾幼虫对某些化学农药产生抗性的现象,为缓解其抗药性产生,具有主动寻找寄主害虫的昆虫病原线虫为草地贪夜蛾的生物防治提供了应用潜能。该文从昆虫病原线虫高效侵染种（品系）及其浓度、共生菌、草地贪夜蛾幼虫易感龄期、田间致死力及影响防控效果的因素等方面进行综述,以期为田间有效利用昆虫病原线虫防治草地贪夜蛾提供参考。