具有III型分泌系统的Pseudomonas moraviensis FP1761植物益生功能及其全基因组分析

 本研究从节瓜根际分离到一株具有防病促生功能的荧光类假单胞菌FP1761。该菌株对部分植物病原真菌和细菌具有拮抗能力,能够解钾、解有机磷和无机磷,可产生氨、蛋白酶、嗜铁素、吲哚乙酸。生物测定表明菌株FP1761可显著促进小麦生长。生理生化、平均核苷酸相似度、16S rDNA和多基因分析将FP1761鉴定为摩拉维亚假单胞菌(Pseudomonas moraviensis)。菌株FP1761基因组草图全长6.12 Mb,(G+C)含量为59.9%,共编码5467个基因序列。将该菌株与种内3个代表性菌株进行泛基因组和核心基因组分析,共产生 4 357个共有基因,菌株FP1761特有基因327个。利用antiSMASH对菌株次生代谢基因簇进行预测,发现其含有8个潜在的次生代谢产物基因簇。其中两个基因簇与嗜铁素pyoverdine合成相关,未见聚酮类合成基因。基因组分析发现,该菌株具有与病原性假单胞菌相似的III型分泌系统,但丢失了效应蛋白调控因子hrpS和转运相关的hrpH和hrpK1基因。对全基因组扫描,菌株FP1761仅保留了病原性假单胞菌的保守效应蛋白AvrE和HopAA1-1。FP1761是目前已发现的唯一具有III型分泌系统的摩拉维亚假单胞菌。本研究表明摩拉维亚假单胞菌FP1761具有潜在的植物防病促生功能,但其III型分泌系统与植物益生互作机制有待进一步解析。     

Revisiting rice breeding methods – evaluating the use of rapid generation advance (RGA) for routine rice breeding

Rice production needs to increase in the future in order to meet increasing demands. The development of new improved and higher yielding varieties more quickly will be needed to meet this demand. However, most rice breeding programmes in the world have not changed in several decades. In this article, we revisit the evidence in favour of using rapid generation advance (RGA) as a routine breeding method. We describe preliminary activities at the International Rice Research Institute (IRRI) to re-establish RGA on a large scale as the main breeding method for irrigated rice breeding. We also describe experiences from the early adoption at the Bangladesh Rice Research Institute. Evaluation of RGA breeding lines at IRRI for yield, flowering time and plant height indicated transgressive segregation for all traits. Some RGA lines were also higher yielding than the check varieties. The cost advantages of using RGA compared to the pedigree method were also empirically determined by performing an economic analysis. This indicated that RGA is several times more cost effective and advantages will be realized after 1 year even if facilities need to be built. Based on our experience, and previous independent research empirically testing the RGA method in rice, we recommend that this method should be implemented for routine rice breeding in order to improve breeding efficiency.     

大豆对大豆胞囊线虫侵染的应答机制研究

大豆胞囊线虫病(Heterodera glycines,soybean cyst nematode,SCN)是大豆生产上的重要病害,其特点为危害重、分布广、难防治,每年对大豆生产造成极大的损失。种植大豆抗性新品种是防治SCN目前最为有效的措施,研究大豆对SCN侵染的应答机制,是培育大豆持久抗病品种的前提,对加快抗线虫品种选育及SCN的防控具有重要的意义。本文综述了大豆对SCN侵染的组织细胞学应答机制;介绍了大豆在SCN侵染后酶系变化及酚类代谢的生理生化应答机制;从分子水平阐明了SCN侵染后大豆的基因转录变化,差异蛋白及DNA甲基化的应答机制,以期为大豆胞囊线虫病害的进一步研究与防治提供参考。     

基于主成分分析和Copula函数的灌溉水利用系数影响因素研究

以新疆生产建设兵团第十二师中型灌区为研究对象，采用首尾法测算2018年和2019年4个样点灌区的灌溉水利用系数，在采用主成分分析法对指标体系降维处理的基础上，用Copula函数构建PCA-Copula评价分析方法，对灌溉水利用系数各影响因素的影响程度和影响规律进行计算分析。结果表明：两年测算数据表明，4个样点灌区灌溉水利用系数都在0.63以上，且最大值达到0.668，分别高于同期全疆、全国平均水平5.05%、10.15%；主成分分析得出，渠道衬砌率（0.944）、滴灌灌溉面积比（0.746）、作物需水量（0.635）、实际灌溉面积（0.734）等都具有超过60%的正贡献率，而葡萄种植比（-0.586）和灌区毛灌溉用水量（-0.645）等具有超过58%的负贡献率。利用PCA-Copula分析评估方法得出，作物种植比例和节水灌溉工程状况对十二师中型灌区灌溉水有效利用系数影响显著（P<0.05），其中葡萄净灌溉定额和灌区毛灌溉用水量对灌溉水有效利用系数的影响极其显著（P<0.01），相关系数分别为0.875、0.742，同时利用Spearman等级相关系数检验法和线型回归来检验PCA-Copula评价法与熵值法的密切程度，检验结果其相关系数分别为 0.87（P＜0.05）和0. 52（P＜0.001），表明PCA-Copula评价方法适用于研究灌溉水利用系数影响因素。     

十里香茶离体培养及再生体系研究

为了保护珍贵的十里香茶树资源,掌握利于十里香茶的最优组培条件,本研究对十里香茶组培过程中外植体类型、消毒时间、培养基添加物及培养条件进行了筛选。结果表明,采用轻微木质化的带腋芽茎段经升汞消毒15 min,接种后暗培养5 d,MS+0.2 mg·L^-1 NAA培养基中添加3 mg·L^-1 PVP+2000 mg·L^-1 Vc或者6 mg·L^-1 PVP+3000 mg·L^-1 AC,可在低污染率的前提下将褐化率降为10%左右,一定程度上解决了茶树组培中褐化率高的难题;采用1/8 MS+1 mg·L^-1 IBA培养基有利于外植体生根且增殖迅速。本研究建立了十里香茶的无菌苗离体培养及再生体系,可通过组培手段对其进行大量繁殖。     

Differential regulation on C5 expression in goose versus mammals by glucose/palmitate provides a potential protection for goose fatty liver

Goose fatty liver is a specific type of nonalcoholic fatty liver that is protected from harmful effects associated with severe steatosis. Our previous findings suggest that suppression of the complement C5 may be relevant, but the mechanism is unclear. Therefore, in this study, we first verified the expression pattern of complement genes (including C5) during goose fatty liver formation and then determined the liver fat content and fatty acid composition by high-performance liquid chromatography (HPLC), followed by selecting the differential metabolites to treat HepG2, goose and mouse primary hepatocytes, aiming to explore the mechanism of C5 and inflammation suppression in goose fatty liver. The data confirmed the suppression of complement genes (including C5) in goose fatty livers. Moreover, fat content was significantly higher in fatty liver versus normal ones, with oleic acid and palmitic acid dominantly accounting for the difference. In line with this, high concentration of palmitate led to down regulation of C5 expression in goose primary hepatocytes whereas upregulation in mouse primary hepatocytes and HepG2 cells. In conclusion, regulation on C5 expression by fatty liver related factors including high level of palmitic acid may contribute to the protection of goose liver from severe hepatic steatosis.     

Establishing an eyeball-weight relationship for Litopenaeus vannamei using machine vision technology

This study aimed to establish a shrimp eyeball-weight relationship model for Litopenaeus vannamei using machine vision technology. A total of 295 shrimp were sampled from a recirculating aquaculture system (RAS). The long-axis length (d), body length (L), and body weight (W) of each individual was measured. The long axis length of the shrimp eyeball was identified and measured using machine vision technology. Continuous fitting and piecewise fitting models were used to construct the eyeball-weight relationship model for L. vannamei. The continuous fitting relationship model was described as: W = 38.865d^2.7914, while the piecewise model was described as: d < 2 mm, W = 0.0326d^3.7363, R² = 0.9288; 2 mm ≤ d < 3.9 mm, W = 0.0401d^3.104, R² = 0.9629; 3.9 mm ≤ d < 5.8 mm, W = 0.0421d^3.0311, R² = 0.9216; 5.8 mm < d, W = 0.103d^2.6226, R² = 0.9457. The root mean square error (RMSE) of the piecewise fitting model (0.0244, 0.1575, 0.5034, 0.7072) was smaller than the continuous fitting model (0.8229). The correlation coefficient (R²) of the piecewise model (0.9288, 0.9629, 0.9216, and 0.9457) was similar to that of the continuous fitting model (R² = 0.9621). The results indicated that the piecewise fitting model is suitable for calculating the biomass of L. vannamei in RAS and provides a novel way of estimating the biomass of L. vannamei cultured in RAS. The piecewise fitting model can also provide the foundation of evaluating the production of shrimp using underwater image recognition in intelligent aquaculture systems.     

亏缺灌溉对南疆棉花生长和水分利用的影响

针对南疆地区水资源短缺、作物水分利用效率低等问题,以棉花为试验材料进行田间小区试验,在棉花现蕾期、开花期以及结铃期分别设置3个亏缺灌溉水平(W₁:50%ET_c,W₂:65%ET_c,W₃:80%ET_c,ET_c为作物蒸发蒸腾量),以全生育期100%ET_c灌溉处理为对照(CK),研究膜下滴灌条件下,不同生育期亏缺灌溉对棉花生长、产量、氮素吸收和水分利用效率的影响.结果表明:现蕾期亏水对棉花株高、叶面积指数、地上干物质生长、氮素吸收和产量有不同程度的抑制效应,但复水后补偿效应显著,其中轻度亏水(W₃)在籽棉产量减少3.48%的条件下,WUE高达1.57 kg/m³,显著高于CK的1.48 kg/m³;开花期亏水,棉花的各项生长指标均有显著降低,复水后补偿效应不显著,不利于棉花生长发育;结铃期亏水对棉花地上干物质累积、氮素吸收和产量均有显著的抑制效应,但在W₂和W₃水平下,WUE均达1.51 kg/m³.综合考虑在保证棉花产量的同时达到节水增产的目的,可在棉花蕾期进行80%ET_c灌水,其他生育阶段实施充分灌溉,来控制营养生长,促进生殖生长,获得更高的水分利用效率.     

不同施氮量下覆膜滴灌玉米相对根长密度模型研究

为探明施氮量对宁夏引黄灌区覆膜滴灌玉米根长密度(RLD)的影响,设置5个施氮水平和1个对照(CK,不施氮与不覆膜)进行试验,测定玉米RLD,建立不同施氮量下相对根长密度(NRLD)模型,并加以检验。结果表明:不同施氮处理的玉米RLD分布区域均随土层深度的增加而减小,且大部分集中在0～20 cm土层;随着施氮量的增加,RLD分布区域明显扩大; NRLD分布满足三阶多项式函数模型,模拟曲线的决定系数R2为0.951,模型检验结果R2为0.845,均方根误差(RMSE)为0.248,拟合效果好,但该多项式模型不能保证NRLD在相对取样深度Zr为1时达到0,故对玉米NRLD分布多项式模型进行优化。优化模型验证结果显示,各施氮处理RMSE不大于0.308,CK、N0、N1、N2、N3和N4处理的标准化均方根误差分别为0.242、0.193、0.184、0.226、0.208和0.273,R2分别为0.903、0.953、0.920、0.944、0.962和0.898,具有较高的拟合度,解决了NRLD在Zr=1时达到0的问题。本研究可为宁夏引黄灌区膜下滴灌玉米NRLD分布拟合、根系养分吸收和施肥管理提供理论参考。     

水稻苗期根系铵钾离子吸收的交互作用研究

【目的】为探讨水稻幼苗根系NH_4~+、K~+吸收的交互作用,深化水稻养分吸收理论,【方法】采用溶液培养的方法,对低钾及高钾浓度下水稻在有铵和无铵时的K~+吸收动力学特征进行了研究,对不同钾浓度下水稻根系NH_4~+的吸收速率进行了比较。【结果】1)当K~+0.2 mmol/L时,水稻根系通过高亲和转运系统吸收K~+服从Michaelich-Menten动力学方程;NH_4~+的存在显著降低K~+的最大吸收速率(Vmax),且降幅随着NH_4~+浓度的增加而增大;NH_4~+对水稻根表载体与K~+的亲和力(Km)影响较小,在1.62 mmol/L NH_4~+浓度下,水稻品种齐粒丝苗和沪科3号的Km分别下降了12.33%和16.46%,远低于Vmax 47.30%和39.21%的降幅。2)当K~+0.5 mmol/L时,水稻根系K~+低亲和转运系统发挥作用,K~+吸收速率随浓度的增加而不断增加,呈不饱和特征;但在相同K~+浓度下,水稻根系的K~+吸收速率随NH_4~+浓度的增加而下降。3)水稻根系对NH_4~+的吸收速率随着NH_4~+浓度的增加而增加;在相同NH_4~+浓度下,水稻根系对NH_4~+的吸收速率受K~+浓度的影响很小。【结论】NH_4~+抑制水稻苗期根系K~+的高亲和转运和低亲和转运,NH_4~+对K~+高亲和吸收的影响主要是由于铵竞争细胞膜上的钾载体所致;外界K~+浓度的变化对水稻幼苗的NH_4~+吸收速率影响很小。水稻铵钾的交互作用主要表现在NH_4~+对K~+吸收的抑制作用。