基于距离相关系数和KNN回归模型的森林蓄积量估测研究

【目的】探究Landsat8 OLI数据和KNN算法在森林蓄积量估测中的潜力。【方法】以湖南省湘潭县为研究区,采用Landsat8 OLI数据和同时期的二类调查数据,通过距离相关系数筛选特征,分别采用线性回归模型(MLR)、K-近邻模型(KNN)、距离加权KNN模型(DW-KNN)和优化欧式KNN模型(FW-KNN)对森林蓄积量进行估测。使用十折交叉方法进行精度检验,对检验结果进行对比分析。【结果】3种KNN模型的估测结果均高于传统的线性模型,并且在3种KNN模型中,FW-KNN算法效果最好,决定系数达到0.69,为3种模型中最高;3种KNN模型中,本研究优化欧氏距离KNN模型的估测精度最高,其均方根误差为30.3%,相比于传统KNN模型的均方根误差降低了5.1%,相比于DW-KNN模型降低了3.3%。【结论】采用DW-KNN蓄积量估测结果明显优于其他两种模型,说明通过特征与蓄积量的相关性优化样本间的距离是一种可行的KNN优化方法。     

稻曲病菌交配型基因MAT1-2-1和MAT1-2-8的特性分析

 有性生殖在真菌的生活史和进化过程中具有重要作用,而交配型基因是控制有性生殖的关键因子。前期研究发现稻曲病菌(Villosiclava virens)MAT1-2型菌株中包含MAT1-2-1和MAT1-2-8两个交配型基因,但是它们如何调控稻曲病菌有性生殖依然不清楚。本文研究了它们在不同侵染和生长发育时期的表达模式和编码的蛋白结构特性。研究表明MAT1-2-1在侵染不同阶段一直下调表达;而MAT1-2-8在侵染早期(5 dpi)上调表达,在侵染后期下调表达。与营养菌丝阶段比较,MAT1-2-1和MAT1-2-8在有性发育过程菌核形成、菌核萌发、子座原基形成和子座成熟4个阶段的表达量都是下降的,在菌核形成阶段表达量最低。生物信息学分析显示MAT1-2-1和MAT1-2-8具有磷酸化位点,为非分泌蛋白,无明显的跨膜结构域。蛋白同源比对分析表明MAT1-2-1与香柱菌(Epichloë typhina)的MAT1-2-1同源性最高,而MAT1-2-8与绿僵菌(Metarhizium)的MBR_08192蛋白同源性最高。进一步研究发现MAT1-2-1和MAT1-2-8能够互作,并分别主要定位在细胞核和细胞基质中。通过质谱技术鉴定到MAT1-2-1的一些候选互作蛋白,如假定Ran交换因子Prp20/Pim1(KDB12229.1)、假定rRNA处理蛋白Ebp2(KDB12923.1)及组蛋白H1(KDB12711.1)等。因此,以上结果为研究稻曲病菌交配型基因MAT1-2-1和MAT1-2-8调控有性生殖的生物学功能奠定了基础。     

草鱼肠系膜脂肪组织高质量总RNA提取方法的研究

基于传统的酸性酚—异硫氰酸胍—氯仿一步提取法,比较分析多种优化操作步骤,摸索出一种高质量提取体质量为80~150 g草鱼肠系膜脂肪组织总RNA的改良方法。试验结果显示,相较于肝脏、脾脏、肠道等脏器组织,草鱼肠系膜脂肪组织RNA丰度低,且极易在样品前处理阶段出现顽固性降解问题。探索发现,将取样量增至约30 mg,可提升RNA产量以满足常规试验需求。针对降解难题,改良常规的样品前处理技术流程,采用鲜样液氮速冻,冻样直接放入TRIzol试剂中裂解,并即刻进行长时间机械匀浆,时长约3 min等核心操作步骤,可显著降低脂肪组织样品RNA的降解。Agilent生物分析仪检测结果显示,改良方法提取的草鱼肠系膜脂肪组织RNA完整度高,关键RIN值为8.7~9.0。研究推测,长时间机械匀浆所形成的持续剪切冲击力或许有助于TRIzol试剂中的异硫氰酸胍等成分突破油滴阻碍而有效抑制内源性RNA酶。本方法提取的草鱼脂肪组织总RNA质量可满足高通量转录组测序要求。     

马铃薯枯萎病和干腐病药剂防治筛选试验报告

马铃薯产业是宁夏“1+4”特色优势产业,是西吉县所有农作物中种植面积最大、涉及农户最多、比较效益最高的农民脱贫致富的主导产业。近年来西吉县马铃薯产业由商品薯种植大县向种薯繁育大县的转变,推动了农业增效,农民增收的快速发展。但各类土传性病害的发生影响了马铃薯产业的发展,同时磋商了农民种植的积极性。为了测定筛选出对马铃薯枯萎病和干腐病防治效果好、成本较低药剂,为大田防治提供科学依据。     

基于BP神经网络的人机联合率定SWMM研究

为解决雨洪管理模型(SWMM)在率定过程中参数复杂、过程繁琐等问题。以西宁市某地块为例建立SWMM模型,利用Morris筛选法进行参数灵敏度分析,并根据灵敏度分析的结果进行人工率定;另外利用BP神经网络对模型进行率定,并结合参数灵敏度对其进行优化。对3种率定方案进行分析,结果表明:水文水力模块参数的相对灵敏度基本一致,其中灵敏度较大的参数为子汇水区面积(Area)、不透水率(Imperv)和不透水区洼地蓄积量(Destore-Imperv),并且不同降雨条件下模型参数的灵敏度存在差异。经过优化后的BP神经网络参数率定方法的模型模拟效果最好,纳什系数最大。结合灵敏度优化BP神经网络的人机联合率定方法一方面能提高BP神经网络率定的准确性,另一方面又能提高传统人工率定的效率。     

岩溶流域典型农业区水体氢氧同位素的空间异质性及形成机制

分别于平水期和枯水期采集了花溪河流域典型农业区地表水和地下水样品。利用氢氧同位素示踪技术,结合土地利用类型对研究区不同水体的补给来源、季节变化及主要影响过程进行了分析,并对不同水体氢氧同位素值进行了空间插值分析,同时对其形成机制进行了分析,阐明了不同土地利用类型影响下的主要水文过程。结果表明:(1)研究区不同水体的主要补给来源为当地大气降水,月亮湖水库受蒸发作用影响明显,地表水和地下水的δD和δ~(18)O整体上呈现平水期高于枯水期的特征。(2)地下水的δD和δ~(18)O在枯水期与平水期均呈现明显的空间分异性特征,西部水田/水库集中区富集,东部旱地集中区贫化,土地利用对研究区环境水文过程影响明显。该研究结果有助于了解不同土地利用方式下地表水对地下水的影响,为流域管理提供科学依据。     

墨脱县农田土壤养分现状与分布特征

本研究利用2017年墨脱县农田测土配方项目土壤调查数据,运用地统计学方法研究了墨脱县耕层土壤有机质(SOM)、碱解氮(AN)、速效磷(AP)和速效钾(AK)养分含量现状及分布特征,以期为墨脱县耕地土壤科学合理施肥提供理论依据。结果表明:当前墨脱全县土壤SOM、AN、AP和AK平均含量为89.18 g/kg、201.25 mg/kg、11.23 mg/kg、313.17 mg/kg;90%的土壤样本有机质含量处于丰富水平;83%的土壤样本碱解氮含量处于丰富、稍丰等级;84%的土壤样本速效磷含量在中等及中等以下肥力水平;46%的土壤样本速效钾含量处于中等及以下水平。从空间分布来看,土壤SOM、AK总体上呈现西高东低,AN含量由北至南呈升高趋势,土壤AP整体上没有明显的空间变化规律。墨脱县耕地土壤养分整体表现为有机质含量丰富,氮素养分较丰富,磷素养分缺乏现象普遍,钾素养分部分区域缺乏。为提升墨脱县耕地土壤肥力水平,各乡镇应该因地制宜进行土壤培肥。     

黑果枸杞茎叶生长及其生态化学计量特征对灌水施肥的响应

在石羊河中游田间条件下,通过灌水和施肥调节黑果枸杞生长。测定不同时期黑果枸杞茎、叶生长量及其化学计量学特征变化,分析器官水平生长速率与化学计量学特征的关系,验证生态化学计量学理论"生长速率假说"。灌水施肥显著促进了茎长、基径和叶片长、宽及叶干重的生长(P<0.05),而茎长、基径、叶面积和叶干重的相对生长速率与对照之间无显著差异。各处理下黑果枸杞新梢C含量及C∶N、C∶P随生育期进程呈增加趋势,而N、P及N∶P呈降低趋势;灌水和施肥处理后茎C含量及C∶N、C∶P、N∶P低于对照,茎N、P含量高于对照。各处理叶片C、N、P含量在生育期内呈降低趋势,而C∶N、C∶P及N∶P呈增加趋势;灌水和施肥后叶片C含量及C∶N、C∶P、N∶P低于对照,叶片N、P含量高于对照。茎C含量及C∶N、C∶P显著高于叶片(P<0.05),而N、P含量及N∶P显著低于叶片(P<0.05)。生长速率假说认为,生物个体的生长速率与体内的N∶P、C∶P具有负相关关系,与N、P含量呈显著的正相关关系。各处理黑果枸杞茎、叶的生长速率与其N、P含量及C∶P、N∶P总体相关性不显著。表明施肥灌水调节下黑果枸杞茎叶生长及化学计量学特征不支持生长速率假说。     

Age estimation of different tree species using a special kind of an electrically recording resistance drill

The determination of tree age is an important issue for urban green planning, forestry and dendrology; finding non-destructive and quasi-non-destructive methods for this purpose is of great theoretical and practical importance. The resistance drilling method is quasi-non-destructive because the average diameter of an opening that remains after drilling does not exceed 3 mm. Do electrically recording resistance drills allow precise assessment of tree age? The aim of this study is to assess the accuracy of determining the number of tree rings based on an examination of this special kind of drilling resistance profiles for three tree species, the pine Pinus sylvestris L., the oak Quercus robur L., and the birch Betula pendula ROTH. In 2015 and 2016, 15 pine trees, 15 oak trees, and 15 birch trees were randomly selected. For each studied tree, a measurement was conducted using the electrically recording resistance drill IML-Resi E400 with a flat-tipped 1.5/3 mm steel needle (research sample), and an increment core was taken (reference sample). The drill used was not a real Resistograph^®. The analysis of the E400-profiles underestimated the number of tree rings; the mean bias error (MBE) values were –6.5, –2.5, and –6.0 years for pine, oak, and birch, respectively. The proportion of investigated trees with less than five years difference between the research and reference samples varied from 38.4 (birch) to 66.7 (oak) percent. The accuracy of tree age determination was lowest for birch and highest for oak. The binomial generalised linear model (GLM) revealed that the most accurate tree age assessments were obtained from tree rings wider than 2 mm. The measurements clearly showed that the electrically recording resistance drill IML-Resi E400 enables a quick, although approximate, tree age assessment. Future research should concentrate on electronically regulating and recording drills, providing a higher spatial and signal resolution, and a stronger correlation to wood density.     

Replication of neurovirulent equine herpesvirus type 1 (EHV-1) in CD172a+ monocytic cells

Equine herpesvirus type 1 (EHV-1) is responsible for respiratory disorders, abortion and myeloencephalopathy (EHM) in horses. Two pathotypes of EHV-1 strains are circulating in the field: neurovirulent (N) and non-neurovirulent (NN). For both strains, CD172a⁺ monocytic cells are one of the main carrier cells of EHV-1 during primary infection, allowing the virus to invade the horse’s body. Recently, we showed that EHV-1 NN strains showed a restricted and delayed replication in CD172a⁺ cells. Here we characterize the in vitro replication kinetics of two EHV-1 N strains in CD172a⁺ cells and investigate if the replication of these strains is similarly silenced as shown for EHV-1 NN strains. We found that EHV-1 N replication was restricted to 7–8% in CD172a⁺ cells compared to 100% in control RK-13 cells. EHV-1 N replication was not delayed in CD172a⁺ cells but virus production was significant lower (10^3.0 TCID₅₀/10⁵ inoculated cells) than in RK-13 cells (10^8.5 TCID₅₀/10⁵ inoculated cells). Approximately 0.04% of CD172a⁺ cells produced and transmitted infectious EHV-1 to neighbour cells compared to 65% of RK-13 cells. Unlike what we observed for the NN strain, pretreatment of CD172a⁺ cells with histone deacetylases inhibitors (HDACi) did not influence the replication of EHV-1 N strains in these cells. Overall, these results show that the EHV-1 replication of N strains in CD172a⁺ cells differs from that observed for NN strains, which may contribute to their different pathogeneses in vivo.