Genome-wide association analysis for stripe rust resistance in spring wheat(Triticum aestivum L.) germplasm

Stripe rust is a continuous threat to wheat crop all over the world. It causes considerable yield losses in wheat crop every year. Continuous deployment of adult plant resistance(APR) genes in newly developing wheat cultivars is the most judicious strategy to combat this disease. Herein, we dissected the genetics underpinning stripe rust resistance in Pakistani wheat germplasm. An association panel of 94 spring wheat genotypes was phenotyped for two years to score the infestation of stripe rust on each accession and was scanned with 203 polymorphic SSRs. Based on D' measure, linkage disequilibrium(LD) exhibited between loci distant up to 45 c M. Marker-trait associations(MTAs) were determined using mixed linear model(MLM). Total 31 quantitative trait loci(QTLs) were observed on all 21 wheat chromosomes. Twelve QTLs were newly discovered as well as 19 QTLs and 35 previously reported Yr genes were validated in Pakistani wheat germplasm. The major QTLs were QYr.uaf.2 AL and QYr.uaf.3 BS(PVE, 11.9%). Dissection of genes from the newly observed QTLs can provide new APR genes to improve genetic resources for APR resistance in wheat crop.     

新疆主要污灌区养分资源特征的研究

通过对新疆七个主要污灌地区养分含量的研究表明污灌区钾含量丰富,氮素含量不足,磷缺乏。库尔勒地区污灌时间最长,养分含量丰富;昌吉地区养分含量属中等水平,其它地区都有不同程度的养分缺乏状况。与新疆土壤普查资料对比,污灌后,土壤的C/N比差异不大9.86—13.85;供磷强度有所改善,均>1%;但供氮及供钾能力并没有显著改善,部分地区的供肥强度极低。相关性研究分析表明,土壤中大部分养分含量与有机质含量呈现极显著或显著相关,只有全钾与之无相关性;其它养分之间也存在相关性,但是部分养分之间的相关性是由于有机质含量干扰所致。     

新疆污灌区重金属含量及形态研究

本文对新疆污灌区土壤中Cu、Zn、N i、Cr、Pb五种重金属元素的含量和形态特征进行了研究。结果表明,Cu、Zn、N i、Cr、Pb主要富集在0—20cm表土中。以《土壤环境质量标准》GB15618—1995二级标准为评价标准,污染综合指数评价均为安全级。新疆污灌表土中Cu、Zn、N i、Cr、Pb以残渣态为主,水溶态和可交换态比例低,其中Cu、Zn、Pb的潜在生物可利用性较高。     

Evaluating the suitability of maggot meal as a partial substitute of soya bean on the productive traits,digestibility indices and organoleptic properties of broiler meat

This study was conducted to replace soya bean meal with maggot meal at difference percentages. A total of 120 one‐day‐old broiler chicks were divided into four groups. Four diets were formulated with maggot meal to replace soya bean meal at the rate of 0%, 10%, 20% and 30% designated as A, B, C and D respectively. Feed and water were offered ad libitum during the study which lasted for 28 days. Feed intake decreased significantly in treated groups while body weight, Feed conversion ratio and dressing percentage increased significantly in group D. Apparent metabolizable energy increased significantly in the group fed 30% maggot meal; however, no significant difference was found in dry matter, crude protein, crude fibre, ether extract, ash and nitrogen free extract between the control and treated groups. The result of sensory evaluation revealed that tenderness and juiciness increased significantly in group C and B respectively. The colour and flavour were most accepted in group B and C. The results indicate that replacement of soya bean meal at the rate of 30% in broiler feed produced most favourable results.     

污灌土壤中氟及硫的形态分布特征

以乌鲁木齐雅马里克山的石灰性土壤为研究对象,采用连续提取法和分步提取法对土壤氟和硫的化学形态进行了测定,研究了不同水质及外源对土壤氟和硫各形态的含量及其分布的影响.结果表明土壤氟主要以残渣态为主,占全氟含量99.5%以上.各形态氟呈残余态氟>有机束缚态氟>水溶态氟>可交换态氟>铁锰结合态氟的趋势.不同水质浇灌后,土壤硫主要以有机硫为主,占71.5%～81.2%.并且呈现有机硫>盐酸可溶性硫>水溶性硫>吸附性硫的趋势.外源物质对土壤理化性质及对土壤中氟和硫各形态有不同程度的影响.土壤氟和硫各形态之间以及各形态与土壤理化性质之间的相关性分析表明,全氟与残余态氟极显著相关.土壤全硫与有机硫之间具有十分密切的相关性.土壤pH值、有机质和CaCO₃含量是影响土壤中氟及硫赋存形态的主要土壤因子.     

Lumpy skin disease of cattle: an emerging problem in the Sultanate of Oman

Lumpy skin disease (LSD) is a highly infectious disease of cattle caused by a virus belonging to the Capripoxvirus genus of the family Poxviridae. The purpose of this study is to place on record the first confirmation of LSD in the Sultanate. The disease was diagnosed and confirmed using polymerase chain reaction, histopathology, transmission electron microscopy and serum neutralization testing. The epizootic occurred in 2009 involving a large number of animals and covering a wide area including Nezwa, Alqabel, Sohar, Saham and Burimi. Morbidity and mortality rates of 29.7 and 26.3 %, and 13.6 and 15.4 % were observed at Nezwa and Sohar, respectively. The clinical signs were much more severe in Holstein–Friesian cattle compared to indigenous breeds and were characterized by multiple skin nodules covering the neck, back, perineum, tail, limbs and genital organs. Affected animals also exhibited lameness, emaciation and cessation of milk production. Oedema of limbs and brisket, and superficial lymph node enlargement were highly prominent. It is not known from where the virus originated, or how it spread to the Sultanate. The disease has become endemic in the country and is liable to extend to other Gulf Cooperation Council Countries and cause a pandemic. It is of major concern to the Omani dairy industry. Due to the widespread presence of screw worm, serious economic losses can follow outbreaks.     

Drainable surplus assessment in irrigated agriculture: field application of the groundwater approach

To assess the drainable surplus of an irrigated area, a methodologybased on a groundwater-balance approach was developed and appliedin Schedule I-B of the Fourth Drainage Project near Faisalabad inPakistan. To determine the seasonal net recharge in this area, anumerical groundwater model was run in inverse mode. The data inputfor the model consisted of the geometry of the aquifer system, theaquifer parameters, and historical watertable elevations. The seasonalnet recharge values, calculated from the individual recharge anddischarge components, were tuned with the results of the inversemodelling. The advantage of such an integrated approach is that allthese components are linked. The design net recharge was estimatedfrom the historical net recharge of the wettest monsoon in the studyperiod. Its rainfall recharge values were then substituted for those of adesign monsoon. In this substitution procedure, the rainfall rechargemethodology and parameters were adopted from the tuning procedure.From this design net recharge, estimates could be made of the requireddrainable surplus, with and without drainage simulation.     

Diversity of bacterial pathogens and their antimicrobial resistance profile among commensal rodents in Qatar

Rodents are sources of many zoonotic pathogens that are of public health concern. This study investigated bacterial pathogens and assessed their antimicrobial resistance (AMR) patterns in commensal rodents in Qatar. A total of 148 rodents were captured between August 2019 and February 2020, and blood, ectoparasites, and visceral samples were collected. Gram-negative bacteria were isolated from the intestines, and blood plasma samples were used to detect antibodies against Brucella spp., Chlamydophila abortus, and Coxiella burnetii. PCR assays were performed to detect C. burnetii, Leptospira spp., Rickettsia spp., and Yersinia pestis in rodent tissues and ectoparasite samples. Antimicrobial resistance by the isolated intestinal bacteria was performed using an automated VITEK analyzer. A total of 13 bacterial species were isolated from the intestine samples, namely Acinetobacter baumannii, Aeromonas salmonicida, Citrobacter freundii, Citrobacter koseri, Enterobacter aerogenes, Enterobacter cloacae, Escherichia coli, Hafnia alvei, Klebsiella pneumoniae, Providencia stuartii, Proteus mirabilis, Pseudomonas aeruginosa, and Salmonella enterica. The majority of them were E. coli (54.63%), followed by P. mirabilis (17.59%) and K. pneumoniae (8.33%). Most of the pathogens were isolated from rodents obtained from livestock farms (50.46%), followed by agricultural farms (26.61%) and other sources (22.94%). No antibodies (0/148) were detected against Brucella spp., C. abortus, or C. burnetii. In addition, 31.58% (6/19) of the flea pools and one (1/1) mite pool was positive for Rickettsia spp., and no sample was positive for C. burnetii, Leptospira spp., and Y. pestis by PCR. A total of 43 (38%) bacterial isolates were identified as multidrug resistant (MDR), whereas A. salmonicida (n?=?1) did not show resistance to any tested antimicrobials. Over 50% of bacterial MDR isolates were resistant to ampicillin, cefalotin, doxycycline, nitrofurantoin, and tetracycline. The presence of MDR pathogens was not correlated with rodent species or the location of rodent trapping. Seven (11.86%) E. coli and 2 (22.2%) K. pneumoniae were extended-spectrum beta-lactamases (ESBL) producers. These findings suggest that rodents can be a source of opportunistic bacteria for human and animal transmission in Qatar. Further studies are needed for the molecular characterization of the identified bacteria in this study.

     

Nutritional evaluation of organically grown fodders in lactating Murrah buffaloes (Bubalus bubalis)

A study was undertaken to evaluate the nutritional response of organically grown diets in buffaloes on nutrients utilization and nutrient efficiency for milk production. For this, ten milch Murrah buffaloes of average body weight (490.72?±?6.65 kg), milk yield (8.13?±?0.33 kg), and lactation stage (85?±?5.28 days) were distributed in inorganic (InDg₎ and organic dietary groups (OrDg) with five animals in each. Buffaloes of InDg and OgDg were fed sorghum hay–berseem fodder-concentrate mixture-based diets grown inorganically and organically, respectively. After 60 days of feeding, a digestion cum metabolism trial was conducted to assess feed intake, nutrient utilization, and N balance, while milk yield and composition were recorded fortnightly. DM, CP, digestible crude protein (DCP), and metabolizable energy (ME) intake (g/Kg w^0.75) were similar in animals of InDg and OrDg. NDF, ADF, and hemicellulose digestibility were (P?<?0.05) higher in animals on OrDg (59.20, 51.55, and 62.67) than InDg diet (54.57, 43.72, and 56.61 %), respectively. Urinary n loss (g/day) was (P?<?0.05) lower in OrDg (67.23) than in InDg (83.55); however, milk N was comparable in animals of both dietary groups (47.36 vs 45.82 g/day). Nitrogen balance was higher in animals of OrDg (39.72) than in InDg (28.08). DCP, TDN, and ME values of both diets were similar. No effect of diet was observed on milk yield and its composition; however, increased lactation length decreased milk yield. Buffaloes on both diets had similar efficiency and conversion ratio of nutrients for milk production. Results revealed that diets (organically vs. inorganically grown) have no effect on milk yield and its composition; however, buffaloes on organic diet have higher fiber digestibility and low urinary N loss which did not affect the dietary nutrients efficiency and conversion ratio for milk production.