Habitat suitability,coverage by protected areas and population connectivity for the Siamese crocodile Crocodylus siamensis Schneider, 1801

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Scenario analyses on the effects of fertilization,improved regeneration material,and ditch network maintenance on timber production of Finnish forests

We used national scenario analyses to examine the effects of fertilization, use of improved regeneration material and ditch network maintenance (DNM), both separately and simultaneously, on timber production of Finnish forests under the current climate. We also analyzed how the area of artificial regeneration, forest fertilization, and DNM developed in different management and harvesting intensity scenarios. The initial data were obtained from the 11th National Forest Inventory of Finland, excluding protected forests. Four sets of even-flow harvesting scenarios with annual timber harvest targets of 60, 70, 80, and 90 million m³ were developed for 90-year simulation period. Use of improved material in artificial forest regeneration was assumed to result in 10% higher diameter and height increment compared to naturally regenerated seedlings. Sub-xeric pine-dominated and mesic spruce-dominated sites were fertilized, and 40% of drained peatlands were maintenance-ditched when they fulfilled a set of predetermined criteria for temperature sum, stand basal area, and mean tree diameter. As a result, when fertilization, improved regeneration material, and DNM were all used, the mean annual volume increment over the 90-year simulation period increased by 3.4–5.4 million m³ depending on harvesting intensity. The maximum sustainable harvest of timber would be almost 80 million m³ yr^?1. The simulated fertilization area was about four times larger than the presently fertilized area, and the simulated DNM area was about the same as the current. Fertilization gave the largest additional 90-year volume increment and the DNM the smallest when they were used separately. The use of improved regeneration material gave the largest additional volume increment in southern Finland and fertilization in central and northern Finland.     

Multi-scale Modeling of Animal Movement and General Behavior Data Using Hidden Markov Models with Hierarchical Structures

Hidden Markov models (HMMs) are commonly used to model animal movement data and infer aspects of animal behavior. An HMM assumes that each data point from a time series of observations stems from one of N possible states. The states are loosely connected to behavioral modes that manifest themselves at the temporal resolution at which observations are made. Due to advances in tag technology and tracking with digital video recordings, data can be collected at increasingly fine temporal resolutions. Yet, inferences at time scales cruder than those at which data are collected and, which correspond to larger-scale behavioral processes, are not yet answered via HMMs. We include additional hierarchical structures to the basic HMM framework, incorporating multiple Markov chains at various time scales. The hierarchically structured HMMs allow for behavioral inferences at multiple time scales and can also serve as a means to avoid coarsening data. Our proposed framework is one of the first that models animal behavior simultaneously at multiple time scales, opening new possibilities in the area of animal movement and behavior modeling. We illustrate the application of hierarchically structured HMMs in two real-data examples: (i) vertical movements of harbor porpoises observed in the field, and (ii) garter snake movement data collected as part of an experimental design. Supplementary materials accompanying this paper appear online.     

Optimal management of Korean pine plantations in multifunctional forestry

Korean pine is one of the most important plantation species in northeast China.Besides timber,it produces edible nuts and plantations sequester carbon dioxide from the atmosphere.This study optimized the management of Korean pine plantations for timber production,seed production,carbon sequestration and for the joint production of multiple benefits.As the first step,models were developed for stand dynamics and seed production.These models were used in a simulation–optimization system to find optimal timing and type of thinning treatments and optimal rotation lengths.It was found that three thinnings during the rotation period were optimal.When the amount or profitability of timber production is maximized,suitable rotation lengths are 65–70 years and wood production is 5.5–6.0 m~3 ha~(-1) a~(-1).The optimal thinning regime is thinning from above.In seed production,optimal rotation lengths are over 100 years.When carbon sequestration in living biomass is maximized,stands should not be clear-cut until trees start to die due to senescence.In the joint production of multiple benefits,the optimal rotation length is 86 years if all benefits(wood,economic profits,seed,carbon sequestration) are equally important.In this management schedule,mean annual wood production is 5.5 m~2 ha~(-1) and mean annual seed yield 141 kg ha~(-1).It was concluded that it is better to produce timber and seeds in the same stands rather than assign stands to either timber production or seed production.     

Optimal management of uneven-aged Norway spruce stands

An optimization model is specified to analyze forest management without any restrictions on the forest management system. The data on forest growth comes from unique field experiments and is used to estimate a nonlinear transition matrix or size-structured model for Norway spruce. The objective function includes detailed harvesting cost specifications and the optimization problem is solved in its most general dynamic form. In optimal uneven-aged management, stand density is shown to be dominated by limitations in natural regeneration. If the goal is volume maximization, even-aged management with artificial regeneration (and thinnings from above) is superior to uneven-aged management. After including regeneration and harvesting costs, the interest rate, and the price differential between saw timber and pulpwood, uneven-aged management becomes superior to even-aged management. However, in the short term the superiority is conditional on the initial stand state.     

Isolation and structure elucidation of highly antioxidative 3,8″-linked biflavanones and flavanone-C-glycosides from Garcinia buchananii bark

The aim of this study was to identify antioxidants from Garcinia buchananii bark extract using hydrogen peroxide scavenging and oxygen radical absorbance capacity (ORAC) assays. LC-MS/MS analysis, 1D- and 2D-NMR, and circular dichroism (CD) spectroscopy led to the unequivocal identification of the major antioxidative molecules as a series of three 3,8″-linked biflavanones and two flavanone-C-glycosides. Besides the previously reported (2R,3R,2″R,3″R)-naringenin-C-3/C-8″ dihydroquercetin linked biflavanone (GB-2; 4) and (2R,3S,2″R,3″R)-manniflavanone (3), whose stereochemistry has been revised, the antioxidants identified for the first time in Garcinia buchananii were (2R,3R)-taxifolin-6-C-β-D-glucopyranoside (1), (2R,3R)-aromadendrin-6-C-β-D-glucopyranoside (2), and the new compound (2R,3S,2″S)-buchananiflavanone (5). The H?O? scavenging and the ORAC assays demonstrated that these natural products have an extraordinarily high antioxidative power, especially (2R,3S,2″R,3″R)-manniflavanone (3) and GB-2 (4), with EC?? values of 2.8 and 2.2 μM, respectively, and 13.73 and 12.10 μmol TE/ μmol. These findings demonstrate that G. buchananii bark extract is a rich natural source of antioxidants.     

QuEChERS multiresidue method validation and mass spectrometric assessment for the novel anthranilic diamide insecticides chlorantraniliprole and cyantraniliprole

The gas-phase dissociation reactions of chlorantraniliprole (Rynaxypyr) and cyantraniliprole (Cyazypyr) have been studied in triple-quadrupole, ion trap, and orbitrap mass spectrometers equipped with electrospray and desorption electrospray ion sources, revealing the formation of odd-electron fragment ions, the structures of which were elucidated. The odd-electron fragments were unusually abundant, and their formation is proposed to occur via a tricyclic intermediate. The applicability of the QuEChERS multiresidue method for the quantitation of chlorantraniliprole and cyantraniliprole was also assessed in this study. Four matrices representative of oily, watery, acidic, and dry crop groups were tested, with a targeted limit of quantitation (LOQ) of 0.01 mg/kg. Average recoveries ranged between 87 and 107%, with relative standard deviations (RSD) of ≤ 8%. Linear calibration functions with correlation coefficients r > 0.99 were obtained. The study provides an expansion of the QuEChERS method to include anthranilic diamides and a mass spectrometric assessment for these two novel agrochemical active ingredients.     

Contribution of anecic earthworms to biopore formation during cultivation of perennial ley crops

Large sized biopores (diameter >2 mm) in the subsoil can be created by tap roots, which leave voids after their decay, or by the burrowing activity of anecic earthworms which may benefit from the temporary lack in tillage in perennial cropping systems. However, the interactions between root growth and earthworm activity in the process of biopore formation during perennial ley cropping are not well understood. The aim of this field study was to quantify the development of the abundance of the anecic earthworm Lumbricus terrestris and the biopore density during the cultivation of lucerne (Medicago sativa L.), chicory (Cichorium intybus L.) and tall fescue (Festuca arundinacea Schreb.) grown for either one, two or three years. An increased abundance of L. terrestris was already recorded after two years of continuous ley when compared with one year cultivation. The ley crop species had only minor influence on the abundance of L. terrestris. Biopore densities of both diameter classes under study (2–5 mm and >5 mm) were not significantly affected by the duration of ley cropping. In contrast, biopore densities were influenced by ley crop species. More biopores of diameter class 2–5 mm were recorded after chicory than after fescue. Lucerne cropping resulted in intermediate biopore density. Additionally, in an incubation experiment under field conditions, we quantified whether L. terrestris preferentially created new biopores or colonized abandoned, previously existing ones. After three weeks of incubation, one third of the adult individuals incubated in the experimental area created new biopores at 0.4 m soil depth. A similar percentage of individuals colonized previously existing biopores, partially widening the lumen of smaller sized biopores. The remaining individuals remained in the topsoil. Sub-adult individuals rarely formed new pores. Half of the introduced sub-adults remained in the topsoil. We conclude that in crop rotations new biopores can be generated during perennial ley cropping by taproot systems of ley crops, but that a two to three- year period without tillage is not sufficient for populations of anecic earthworms to make a marked contribution to biopore density in the subsoil. The relevance of anecic earthworms for altering physical and chemical properties of biopores during ley cropping still needs further investigation.     

NPAS2 and PER2 are linked to risk factors of the metabolic syndrome

Background  

Mammalian circadian clocks control multiple physiological events. The principal circadian clock generates seasonal variations in behavior as well. Seasonality elevates the risk for metabolic syndrome, and evidence suggests that disruption of the clockwork can lead to alterations in metabolism. Our aim was to analyze whether circadian clock polymorphisms contribute to seasonal variations in behavior and to the metabolic syndrome.