Grasses, litter, and their interaction affect microbial biomass and soil enzyme activity

Plant effects on ecosystem processes are mediated through plant-microbial interactions belowground and soil enzyme assays are commonly used to directly relate microbial activity to ecosystem processes. Live plants influence microbial biomass and activity via differences in rhizosphere processes and detrital inputs. I utilized six grass species of varying litter chemistry in a factorial greenhouse experiment to evaluate the relative effect of live plants and detrital inputs on substrate-induced respiration (SIR, a measure of active microbial biomass), basal respiration, dissolved organic carbon (DOC), and the activities of β-glucosidase, β-glucosaminidase, and acid phosphatase. To minimize confounding variables, I used organic-free potting media, held soil moisture constant, and fertilized weekly. SIR and enzyme activities were 2-15 times greater in litter-addition than plant-addition treatments. Combining live plants with litter did not stimulate microbial biomass or activity above that in litter-only treatments, and β-glucosidase activity was significantly lower. Species-specific differences in litter N (%) and plant biomass were related to differences in β-glucosaminidase and acid phosphatase activity, respectively, but had no apparent effect on β-glucosidase, SIR, or basal respiration. DOC was negatively related to litter C:N, and positively related to plant biomass. Species identity and living plants were not as important as litter additions in stimulating microbial activity, suggesting that plant effects on soil enzymatic activity were driven primarily by detrital inputs, although the strength of litter effects may be moderated by the effect of growing plants.     

Electron donors and acceptors influence anaerobic soil organic matter mineralization in tidal marshes

Anaerobic decomposition in wetland soils is carried out by several interacting microbial processes that influence carbon storage and greenhouse gas emissions. To understand the role of wetlands in the global carbon cycle, it is critical to understand how differences in both electron donor (i.e., organic carbon) and terminal electron acceptor (TEA) availability influence anaerobic mineralization of soil organic matter. In this study we manipulated electron donors and acceptors to examine how these factors influence total rates of carbon mineralization and the pathways of microbial respiration (e.g., sulfate reduction versus methanogenesis). Using a field-based reciprocal transplant of soils from brackish and freshwater tidal marshes, in conjunction with laboratory amendments of TEAs, we examined how rates of organic carbon mineralization changed when soils with different carbon contents were exposed to different TEAs. Total mineralization (the sum of CO₂ + CH₄ produced) on a per gram soil basis was greater in the brackish marsh soils, which had higher soil organic matter content; however, on a per gram carbon basis, mineralization was greater in the freshwater soils, suggesting that the quality of carbon inputs from the freshwater plants was higher. Overall anaerobic metabolism was higher for both soil types incubated at the brackish site where SO₄²⁻ was the dominant TEA. When soils were amended with TEAs in the laboratory, more thermodynamically favorable respiration pathways typically resulted in greater organic matter mineralization (Fe(III) respiration > SO₄²⁻ reduction > methanogenesis). These results suggest that both electron donors and acceptors play important roles in regulating anaerobic microbial mineralization of soil organic matter.     

湿地甲烷厌氧氧化机制研究进展

微生物主导的甲烷厌氧氧化（AOM）一直是甲烷（CH₄）氧化研究的前沿热点问题，对控制全球湿地CH4排放具有重要意义。介绍了硫酸盐还原型（SAMO）、反硝化型（DAMO）、金属氧化物驱动型（Metal-AOM）和中间电子直接转移型（DIET）四种AOM途径，其中，SAMO以SO₄^2-作为AOM的最终电子受体，DAMO以 NO₂^-/ NO₃^-作为AOM的最终电子受体，Metal-AOM以铁锰等金属离子/金属氧化物作AOM的最终电子受体，而种间电子转移是一种不需要中间产物的转移方式。详细阐述了途径中主要功能微生物菌群的相关研究，重点讨论了AOM途径中可能发生的反应机理和进展，论述了目前常用的微生物群落结构和丰度检测分析的分子生物学方法。最后，从湿地环境因子对参与AOM微生物的影响机制、功能微生物富集培养以及湿地微生物参与环境污染控制等方面进行展望。这对于进一步研究全球湿地碳、氮循环提供了微生物学方面的参考。     

Ecophysiology of iron homeostasis in plants

In nature, iron (Fe) occurs in abundance and ranks fourth among all elements on Earth’s surface. Still, its availability to plants is reduced, once this element is in the form of hydrated oxides, which can limit plant productivity and biomass production. On the other hand, in high concentrations, this essential micronutrient for the plants can become a toxic agent, increasing the environmental contamination. Fe is necessary for the maintenance of essential processes like respiration and photosynthesis, participating in the electron transport chain and in the conversion between Fe²⁺ and Fe³⁺, being a key element for carbon dioxide (CO₂) fixation and, therefore, important for crop production of cultivated or natural species. The balance of Fe should be strictly controlled, because both its deficiency and its toxicity affect the physiological process of plants. In aerated soils Fe is present in the form of Fe³⁺, which is the oxidized form and is less available to plants, so these organisms have developed different strategies for absorption, transport and storage of Fe. Deficiency and excess of Fe correlate with local soil conditions and with the care adopted in plant nutrition during the phenological phases and/or in the course of its cultivation. In situations of excessive accumulation of Fe in tissues, an enhancement of hydroxyl radical generation (OH^?) occurs by Fenton reaction. Here, we review the nutritional, genetic and ecophysiological aspects of uptake, translocation and accumulation of Fe ions in plants growing under conditions of deficiency or toxicity of this metal.     

Carbon partitioning in ectomycorrhizal Scots pine seedlings

The complete carbon budget and the turnover rate of assimilated carbon of ectomycorrhizal Scots pine seedlings growing on natural humus were determined in microcosm conditions. The main aim was to improve understanding of the partitioning of the assimilated carbohydrates within seedlings associated with multiple ectomycorrhizal fungi, and to discover carbon dynamics of the mycorrhizosphere.Plant photosynthesis and below-ground respiration were measured in order to obtain the actual carbon assimilation and respiration rates at the time of measurements. Soon after the photosynthesis and respiration rate measurements the seedlings were pulse-labeled with ¹⁴CO₂ to follow carbon allocation to different plant, fungal and soil compartments and rhizosphere respiration. Long-term carbon allocation during the entire life span of the seedlings was estimated by measuring plant and mycorrhizal root-tip biomass. The ectomycorrhizal community was analyzed using morphotyping and ITS-sequencing.The ¹⁴C label was detected in rhizosphere respiration after 12 h and it peaked between 36 and 60 h after labeling. More than half of the assimilated carbon was allocated below-ground as biomass or respiration and higher mycorrhizal biomass increased the below-ground carbon turnover. The presence of Suillus variegatus affected the plant carbon balance in several ways. When S. variegatus was present, the below-ground respiration increased and this carbon loss was compensated by higher photosynthetic activity. Other fungal species did not differ between each other in their effects on carbon balance. Our findings indicate that some root-associated mycorrhizal fungal symbionts can significantly alter plant CO₂ exchange, biomass distribution, and the allocation of recently photosynthesized plant-derived carbon.     

Impact of experimental drought and rewetting on redox transformations and methanogenesis in mesocosms of a northern fen soil

The impact of climate change on the greenhouse gas balance of peatlands is debated as they function both as sinks of carbon and significant sources of methane. To study redox transformations influencing methane production, we incubated two intact soil monoliths from a northern temperate fen and compared a permanently wet treatment to a treatment undergoing an experimentally induced drought for 50 days. Net turnover of dissolved inorganic carbon (DIC), methane (CH₄) and electron acceptors in the saturated zone was calculated using a mass balance approach, and sulfate gross reduction rates were determined using a ³⁵S radiotracer. Thermodynamic energy yield of different electron accepting processes was calculated and related to the observed respiration patterns. Permanently wet conditions lead to a depletion of electron acceptors within 50 days and onset of methanogenic conditions. During drought, electron acceptors were renewed and methanogenesis was temporarily suppressed in most of the peat for another 20-50 days after rewetting. Methanogenesis began, however, apparently locally before electron acceptors were fully depleted in the remainder of the peat, and iron and sulfate reduction occurred simultaneously. Anaerobic production of DIC could mostly but not fully be explained by reduction of nitrate, sulfate and ferric iron. Sulfate gross reduction rates of up to ∼450 nmol cm⁻³ d⁻¹ determined with ³⁵S-SO₄ and potentially explained the surplus of 50-60 mmol m⁻² of DIC production in one treatment; however, the sulfate pools were too small to sustain such rates beyond some hours to days. Furthermore, anaerobic DIC production proceeded at constant rates after depletion of dissolved inorganic electron acceptors, although not being balanced by methane production. An unknown electron acceptor was thus consumed, and sulfate and potentially other electron acceptors recycled, either by humic substances, by aerenchymatic oxygen transport, or by oxygen in the capillary fringe at low levels of air filled porosity.     

Microbial communities, biomass, and activities in soils as affected by freeze thaw cycles

Two Finnish agricultural soils (peat soil and loamy sand) were exposed to four freeze-thaw cycles (FTC), with a temperature change from −17.3±0.4 °C to +4.1±0.4 °C. Control cores from both soils were kept at constant temperature (+6.6±2.0 °C) without FTCs. Soil N₂O and CO₂ emissions were monitored during soil thawing, and the effects of FTCs on soil microbes were studied. N₂O emissions were extremely low in peat soil, possibly due to low soil water content. Loamy sand had high N₂O emission, with the highest emission after the second FTC. Soil freeze-thaw increased anaerobic respiration in both soil types during the first 3-4 FTCs, and this increase was higher in the peat soil. The microbial community structure and biomass analysed with lipid biomarkers (phospholipid fatty acids, 3- and 2- hydroxy fatty acids) were not affected by freezing-thawing cycles, nor was soil microbial biomass carbon (MIB-C). Molecular analysis of the microbial community structure with temperature gradient gel electrophoresis (TGGE) also showed no changes due the FTCs. These results show that freezing and thawing of boreal soils does not have a strong effect on microbial biomass or community structure.     

Switchgrass Influences on Soil Biogeochemical Processes in the Dryland Region of the Pacific Northwest

Switchgrass and other perennial grasses have been promoted as biomass crops for production of renewable fuels. The objective of this study was to evaluate the effect of biomass removal on soil biogeochemical processes. A 3-year field study consisting of three levels of net primary productivity (NPP; low, medium, and high growing season precipitation) and two biomass crops (winter wheat and switchgrass) was conducted near Pendleton, Oregon. Switchgrass increased soil carbon (C)–nitrogen (N) ratio, but the effect varied with net primary productivity (NPP) and soil depth. In situ soil respiration (carbon dioxide; CO₂) rate from switchgrass increased with NPP level but switchgrass had greater cumulative flux than wheat in medium and low NPP. Nitrogen mineralization and microbial biomass carbon were significantly greater under switchgrass than under wheat at high and medium NPP. Introduction of switchgrass initiates major changes in soil nutrient dynamics through organic-matter input.     

Soil microbial biomass and activity in Chinese tea gardens of varying stand age and productivity

Tea (Camellia sinensis) is a globally important crop and is unusual because it both requires an acid soil and acidifies soil. Tea stands tend to be extremely heavily fertilized in order to improve yield and quality, resulting in a great potential for diffuse pollution. The microbial ecology of tea soils remains poorly understood; an improved understanding is necessary as processes affecting nutrient availability and loss pathways are microbially mediated. We therefore examined the relationships between soil characteristics (pH, organic C, total N, total P, available P, exchangeable Al), the soil microbial biomass (biomass C, biomass ninhydrin-N, ATP, phospholipid fatty acids—PLFAs) and its activities (respiration, net mineralization and nitrification). At the Tea Research Institute, Hangzhou (TRI), we compared fields of different productivity levels (low, medium and high) and at Hongjiashan village (HJS) we compared fields of different stand age (9, 50 and 90 years). At both sites tea soils were compared with adjacent forest soils. At both sites, soil pH was highest in the forest soil and decreased with increasing productivity and age of the tea stand. Soil microbial biomass C and biomass ninhydrin-N were significantly affected by tea production. At TRI, microbial biomass C declined in the order forest>low>high>middle production and at HJS in the order stand age 50>age 9>forest>age 90. Soil pH had a strong influence on the microbial biomass, demonstrated by positive linear correlations with: microbial biomass C, microbial biomass ninhydrin-N, the microbial biomass C:organic C ratio, the microbial biomass ninhydrin-N:total N ratio, the respiration rate and specific respiration rate. Above pH_(KCl) 3.5 there was net N mineralization and nitrification, and below this threshold some samples showed net immobilization of N. A principal component (PC) analysis of PLFA data showed a consistent shift in the community composition with productivity level and stand age. The ratio of fungal:bacterial PLFA biomarkers was negatively and linearly correlated with specific respiration in the soils from HJS (r²=0.93, p=0.03). Our results demonstrate that tea cultivation intensity and duration have a strong impact on the microbial community structure, biomass and its functioning, likely through soil acidification and fertilizer addition.     

Light inhibition of carbon mineralization associated with iron redox processes in calcareous paddy soil

Purpose

The iron redox cycle is closely tied to the fate of carbon in terrestrial ecosystems, especially paddy soils. Varies diurnally and seasonally, light—the crucial environmental factor—may be a fundamental factor elucidating temporal and spatial variabilities of carbon-containing gases emission. The role of sunlight in the iron-mediated carbon cycle, however, has not been fully elucidated. We conduct this study to test the role of light in the iron-mediated carbon cycling.

Materials and methods

In this study, we conducted anaerobic incubation experiments of a calcareous paddy soil in serum vials under alternating dark and light conditions. The dynamic evolution of the carbon and iron contents was evaluated by measuring the CO₂, CH₄, and O₂ concentrations in the headspace of the vials, as well as the water-soluble inorganic carbon, microbial biomass carbon, and HCl-extractable ferrous iron contents in soil slurries. We also analyzed the soil microbial community structure by high-throughput 16S rRNA gene sequencing.

Results and discussion

The results highlighted the positive correlation between carbon mineralization and ferric iron reduction under dark conditions. Under light conditions, however, ferrous iron was oxidized by the O₂ generated via oxygenic photosynthesis of phototrophic bacteria such as Cyanobacteria, along with a decreased production of CO₂, CH₄, and water-soluble inorganic carbon. The abundance of Cyanobacteria positively correlated to O₂ levels and MBC content significantly. Light-induced periodic variations in the redox conditions facilitated carbon fixation in microbial biomass and up to 31.79 μmol g^?1 carbon was sequestrated during 30 days light incubation.

Conclusions

These results indicate that light inhibits the emission of carbon-containing greenhouse gases associated with the iron redox cycle in calcareous paddy soil. Assimilation of inorganic carbon by phototrophs may responsible for the inhibition of carbon mineralization. Our study suggests that procedures allowing more light to reach the soil surface, for instance, reducing the planting density, may mitigate greenhouse gas emissions and promote carbon sequestration in paddy soils.

     

Feedback on plant productivity can be constrained by SOM in N-limited grasslands

In many terrestrial ecosystems plant productivity is limited by the availability of mineral nitrogen, which is produced by soil microbial transformations of organic N in soil organic matter (SOM-N). Mineral N availability results from two opposing processes, 1) gross mineral N production (gross ammonification/gross nitrification) and 2) microbial N immobilization. These processes can be influenced by the availability of plant-derived C (PDC) inputs to the microbes, SOM-N pool size, and the size of the microbial community (microbial biomass). We considered how changes in PDC inputs and SOM-N pool size together may alter microbial biomass, mineral N availability, and feedbacks on plant productivity. In areas dominated by one of six tallgrass prairie species along a natural gradient of PDC inputs and SOM-N pool size, we conducted a field survey of microbial biomass and gross ammonification. We also performed greenhouse manipulations of SOM-N pool size and PDC inputs on two species in our study area (Poa pratensis and Schizachyrium scoparium). Structural equation modeling of the field data showed that gross ammonification was both positively and directly related to microbial biomass and SOM-N pool size. Gross ammonification was positively and indirectly related to SOM-N pool size and belowground PDC inputs, via microbial biomass. In the short-term greenhouse study, PDC inputs and SOM-N pool size positively affected gross mineral N production, although only at high SOM-N pool size. If the patterns in the greenhouse can be applied to field conditions, this suggests that SOM-N pool size may constrain plant driven feedbacks on plant productivity by limiting gross mineral N production.     

CO2 and inorganic N supply modify competition for N between co-occurring grass plants, tree seedlings and soil microorganisms

Plant-plant and plant-soil interactions play a key role in determining plant community structure and ecosystem function. However, the effects of global change on the interplay between co-occurring plants and soil microbes in successional communities are poorly understood. In this study, we investigated competition for nitrogen (N) between soil microorganisms, grass plants and establishing tree seedlings under factorial carbon dioxide (CO₂) and N treatments. Fraxinus excelsior seedlings were germinated in the presence or absence of grass competition (Dactylis glomerata) at low (380 μmol mol⁻¹) or high (645 μmol mol⁻¹) CO₂ and at two levels of N nutrition in a mesocosm experiment. Pulse ¹⁵N labelling was used to examine N partitioning among plant and soil compartments. Dactylis exerted a strong negative effect on Fraxinus biomass, N capture and ¹⁵N recovery irrespective of N and CO₂ treatment. In contrast, the presence of Dactylis had a positive effect on the microbial N pool. Plant and soil responses to N treatment were of a greater magnitude compared with responses to elevated CO₂, but the pattern of Fraxinus- and microbial-N pool response to N and CO₂ varied depending on grass competition treatment. Within the Dactylis competition treatment, decreases in Fraxinus biomass in response to N were not mirrored by decreases in tree seedling N content, suggesting a shift from below- to above-ground competition. In the Dactylis-sown pots, ¹⁵N recovery could be ranked Dactylis > microbial pool > Fraxinus in all N and CO₂ treatment combinations. Inequalities between Fraxinus and soil microorganisms in terms of ¹⁵N recovery were exacerbated by N addition. Contrary to expectations, elevated CO₂ did not increase plant-microbe competition. Nevertheless, microbial ¹⁵N recovery showed a small positive increase in the high CO₂ treatment. Overall, elevated CO₂ and N supply did not interact on plant/soil N partitioning. Our data suggest that the competitive balance between establishing tree seedlings and grass plants in an undisturbed sward is relatively insensitive to CO₂ or N-induced modifications in N competition between plant and soil compartments.     

Salt marsh rhizosphere affects microbial biotransformation of the widespread halogenated contaminant tetrabromobisphenol-A (TBBPA)

Estuarine sediments are the repository for a wide range of contaminants. Anthropogenic impacts and variations in the belowground biomass of salt marsh plants potentially select for different sediment microbial communities with different functional capabilities, including the ability to biotransform anthropogenic contaminants. There are large differences in both root morphology and the amount of fine root biomass of Spartina alterniflora and Phragmites australis; Spartina is the species commonly used to replace Phragmites in northeastern US salt marsh restoration projects. Our study compared the effect of these two macrophyte species on sediment microbial communities responsible for the biotransformation of the halogenated flame retardant tetrabromobisphenol A (TBBPA). Sediments were obtained from contaminated and uncontaminated salt marsh field sites in New Jersey. Anaerobic methanogenic sediment microcosms were established and incubated for up to 130 days. TBBPA was reductively dehalogenated resulting in the transient formation of two intermediates, identified as tribromobisphenol A and dibromobisphenol A, and the formation and accumulation of bisphenol A (BPA) as the end product. Spartina sediments from both sites were found to dehalogenate TBBPA more rapidly than the Phragmites or unvegetated sediments, resulting in greater production of BPA. Microbial community diversity as measured by in situ sediment phospholipid fatty acid (PLFA) composition prior to TBBPA exposure, was found to be higher in the uncontaminated sediments; differences in microbial PLFA diversity were not seen in contaminated sediments associated with either the different plant species or unvegetated sediment. The results of this study demonstrate that these two plant species affected sediment microbial community function with respect to dehalogenation capabilities, even though the disturbed and undisturbed sediments varied in microbial community composition.     

Plant species influence microbial diversity and carbon allocation in the rhizosphere

Plant species effects on microbial communities are attributed to changes in microbial community composition and biomass, and may depend on plant species specific differences in the quality of resources (carbon) inputs. We examined the idea that plant-soil feedbacks can be explained by a chance effect, which is the probability of a highly productive or keystone plant species is present in the community and will influence the functions more than the number of species per se. A ¹³C pulse labelling technique was applied to three plant species and a species mixture in a greenhouse experiment to examine the carbon flow from plants to soil microbial communities. The ¹³C label was given as CO₂ to shoots of a legume (Lotus corniculatus), a forb (Plantago lanceolata), a grass (Holcus lanatus) and a mixture of the three species. Microbial phospholipid fatty acids (PLFA) was analysed in order to determine the biomass and composition of the soil microbial community. The incorporation of the stable isotope into soil microorganisms was determined through GC-IRMS analyses of the microbial PLFAs. Plant species identity did not influence the microbial biomass when determined as total carbon of microbial phospholipid fatty acids. However, the labelled carbon showed that the grass monoculture (H. lanatus) and the plant mixture allocated more ¹³C into bacteria and actinomycete biomass than the other plant species. H. lanatus monocultures had also the highest amounts of ¹³C allocated to AM-fungi and saprophytic fungi. The carbon allocation from plants to soil microorganisms in a plant species mixture can thus be explained by the presence of a highly productive species that influence soil functions.     

Litter, warming and plants affect respiration and allocation of soil microbial and plant C, N and P in arctic mesocosms

In a mesocosm experiment, we studied decomposition rates as CO₂ efflux and changes in plant mass, nutrient accumulation and soil pools of nitrogen (N) and phosphorus (P), in soils from a sub-arctic heath. The soil was incubated at 10 °C and 12 °C, with or without leaf litter and with or without plants present. The purpose of the experiment was to analyse decomposition and nutrient transformations under simulated, realistic conditions in a future warmer Arctic.Both temperature enhancement and litter addition increased respiration rates. Temperature enhancement and surprisingly also litter addition decreased microbial biomass carbon (C) content, resulting in a pronounced increase of specific respiration. Microbial P content increased progressively with temperature enhancement and litter addition, concomitant with increasing P mineralisation, whereas microbial N increased only in the litter treatment, at the same time as net N mineralisation decreased. In contrast, microbial biomass N decreased as temperature increased, resulting in a high mobilisation of inorganic N.Plant responses were closely coupled to the balance of microbial mineralisation and immobilisation. Plant growth and N accumulation was low after litter addition because of high N immobilisation in microbes and low net mineralisation, resulting in plant N limitation. Growth increased in the temperature-enhanced treatments, but was eventually limited by low supply of P, reflected in a low plant P concentration and high N-to-P ratio. Hence, the different microbial responses caused plant N limitation after litter addition and P limitation after temperature enhancement. Although microbial processes determined the main responses in plants, the plants themselves influenced nutrient turnover. With plants present, P mobilisation to the plant plus soil inorganic pools increased significantly, and N mobilisation non-significantly, when litter was added. This was presumably due to increased mineralisation in the rhizosphere, or because the nutrients in addition to being immobilised by microbes also could be absorbed by plants. This suggests that the common method of measuring nutrient mineralisation in soils incubated without plants may underestimate the rates of nutrient mobilisation, which probably contributes to a commonly observed discrepancy of measured lower rates of net nutrient mineralisation than uptake rates in arctic soils.     

Global climate change and its impacts on the terrestrial Arctic carbon cycle with special regards to ecosystem components and the greenhouse‐gas balance

The climatic changes on earth may have serious implications for the carbon (C) cycle in the terrestrial Arctic throughout the 21st century. Arctic vegetation takes up carbon dioxide (CO₂) from the atmosphere producing biomass. In a cold and often moist soil environment, dead organic matter is preferentially preserved as soil organic matter (SOM) due to the inhibition of decomposition processes. However, viable soil microbes exhale huge amounts of CO₂ and methane (CH₄) annually. Hence, Arctic ecosystems exhibit annual fluxes of both carbon‐based (CO₂ and CH₄) greenhouse gases (GHGs) that are in an order of magnitude of millions of tons. Rising Arctic temperatures lead to the degradation of much of today's permafrost in the long run. As a result, large quantities of frozen SOM may become available for decomposers, and GHGs that are entrapped in permafrost may be released. At the same time, warming tends to stimulate the growth, development, and reproduction of many Arctic plants, at least transiently. The present northward migration of boreal shrubs and trees into southern tundra areas may be amplified by that, increasing the ecosystems' gross primary production and, thus, their C sequestration. On the other hand, rising temperatures boost SOM decomposition and microbial respiration rates. In general, soil temperature and soil moisture are key environmental variables to control the intensity of aerobic and anaerobic respiration by microbes, and autotrophic respiration by plants. On the basis of published data on Arctic CO₂ and CH₄ fluxes, the calculations on the terrestrial C‐based Arctic GHG balance made in this review reveal a current annual GHG exchange that ranges between a weak storage of ≤ 225 Tg CO₂ equivalent (eq.) y^–1 and a huge release of ≤ 1990 Tg CO₂ eq. y^–1. Hence, the Arctic GHG balance does apparently already contribute positively to the climatic changes at present. Regarding the future, the relative development of the uptake and release of CO₂ and CH₄ by northern ecosystems is fundamental to the overall GHG status of the Arctic under scenarios of continued climate change.     

Temperature sensitivity of respiration differs among forest floor layers in a Pinus resinosa plantation

Decomposer microorganisms contribute to carbon loss from the forest floor as they metabolize organic substances and respire CO₂. In temperate and boreal forest ecosystems, the temperature of the forest floor can fluctuate significantly on a day-to-night or day-to-day basis. In order to estimate total respiratory CO₂ loss over even relatively short durations, therefore, we need to know the temperature sensitivity (Q₁₀) of microbial respiration. Temperature sensitivity has been calculated for microbes in different soil horizons, soil fractions, and at different depths, but we would suggest that for some forests, other ecologically relative soil portions should be considered to accurately predict the contribution of soil to respiration under warming. The floor of many forests is heterogeneous, consisting of an organic horizon comprising a few more-or-less distinct layers varying in decomposition status. We therefore determined at various measurement temperatures the respiration rates of litter, F-layer, and H-layer collected from a Pinus resinosa plantation, and calculated Q₁₀ values for each layer. Q₁₀ depended on measurement temperature, and was significantly greater in H-layer than in litter or F-layer between 5 and 17 °C. Our results indicate, therefore, that as the temperature of the forest floor rises, the increase in respiration by the H-layer will be disproportionate to the increase by other layers. However, change in respiration by the H-layer associated with change in temperature may contribute minimally or significantly to changes of total forest floor respiration in response to changes in temperature depending on the depth and thickness of the layer in different forest ecosystems.     

Effects of plant species on microbial biomass phosphorus and phosphatase activity in a range of grassland soils

Soil P transformations are primarily mediated by plant root and soil microbial activity. A short-term (40 weeks) glasshouse experiment with 15 grassland soils collected from around New Zealand was conducted to examine the impacts of ryegrass (Lolium perenne) and radiata pine (Pinus radiata) on soil microbial properties and microbiological processes involved in P dynamics. Results showed that the effect of plant species on soil microbial parameters varied greatly with soil type. Concentrations of microbial biomass C and soil respiration were significantly greater in six out of 15 soils under radiata pine compared with ryegrass, while there were no significant effects of plant species on these parameters in the remaining soils. However, microbial biomass P (MBP) was significantly lower in six soils under radiata pine, while there were no significant effects of plant species on MBP in the remaining soils. The latter indicated that P was released from the microbial biomass in response to greater P demand by radiata pine. Levels of water soluble organic C were significantly greater in most soils under radiata pine, compared with ryegrass, which suggested that greater root exudation might have occurred under radiata pine. Activities of acid and alkaline phosphatase and phosphodiesterase were generally lower in most soils under radiata pine, compared with ryegrass. The findings of this study indicate that root exudation plays an important role in increased soil microbial activities, solubility of organic P and mineralization of organic P in soils under radiata pine.     

Use of a regression method to partition sources of ecosystem respiration in an alpine meadow

The partitioning of ecosystem respiration (ER) into plant respiration (PR), aboveground-part respiration (AGR), root respiration (RR), and microbial respiration (MR) components is crucial for understanding the responses of carbon cycling in terrestrial ecosystems to climate change. Here, we present the ER-PB/AGB regression method, which is a modification of the SR-BGB method (PB, plant biomass; AGB, aboveground biomass; SR, soil respiration; BGB, belowground biomass) and is based on the assumption of a linear relationship between biomass and respiration rate for the partitioning of ER into PR, AGR, RR, and MR. Diurnal measurements of CO₂ flux and biomass analysis were conducted in three Kobresia (Kobresia pygmaea, Kobresia humilis, and Kobresia tibetica) meadows on the Qinghai-Tibetan Plateau. We found significant linear relationships between ER and PB/AGB in the three meadows. However, the relationships between measured SR and BGB were either not significant or lower than those between ER and PB/AGB. The relative contributions of respiration components (AGR, RR, MR) to ER decreased consistently in the order AGR > MR > RR in the three Kobresia meadows. The contributions of RR and MR to SR calculated by the proposed ER-PB/AGB method differed widely among the three meadows and were consistently higher (RR) and lower (MR) than those by the SR-BGB method in all three meadows. Compared with the SR-BGB technique, our ER-PB/AGB regression method proved capable of determining more accurately the temporal changes in a larger number of respiration components.     

Plant nitrogen uptake drives rhizosphere bacterial community assembly during plant growth

When plants establish in novel environments, they can modify soil microbial community structure and functional properties in ways that enhance their own success. Although soil microbial communities are influenced by abiotic environmental variability, rhizosphere microbial communities may also be affected by plant activities such as nutrient uptake during the growing season. We predicted that during the growing season, plant N uptake would explain much of the variation in rhizosphere microbial community assembly and functional traits. We grew the invasive C₃ grass Bromus tectorum and three commonly co-occurring native C₃ grasses in a controlled greenhouse environment, and examined rhizosphere bacterial community structural and functional characteristics at three different plant growth stages. We found that soil N availability and plant tissue N levels strongly correlated with shifts in rhizosphere bacterial community structure. It also appeared that the rapid drawdown of soil nutrients in the rhizosphere during the plant growing season triggered a selection event whereby only those microbes able to tolerate the changing nutrient conditions were able to persist. Plant N uptake rates inversely corresponded to microbial biomass N levels during periods of peak plant growth. Mechanisms which enable plants to influence rhizosphere bacterial community structure and function are likely to affect their competitive ability and fitness. Our study suggests that plants can alter their rhizosphere microbiomes through influencing nutrient availability. The ways in which plants establish their rhizosphere bacterial communities may now be viewed as a selection trait related to intrinsic plant species nutrient demands.