Target strength estimation of black porgy Acanthopagrus schlegeli using acoustic measurements and a scattering model

ABSTRACT:   Black porgy are hatched and released in marine ranching areas in Japan, Korea and Taiwan to maintain fisheries resources in coastal areas. If acoustic methods are used for field surveys, target strength ( TS ) information on the species is needed to convert acoustic data to biomass density. Target strength of black porgy ( Acanthopagrus schlegeli ) 15.5–32.9 cm fork length (nine individuals) was measured at 38 and 120 kHz (split beam) by ex situ measurements (cage and fishhook methods) of living fish, a tethered method with shock-frozen fish, and an acoustic scattering model, the Kirchhoff ray mode (KRM) model based on fish morphology. The ex situ TS -to-fork length ( FL , cm) relationships were TS _38kHz = 20log₁₀ FL  − 64.6 ( r  = 0.77) and TS _120kHz = 20log₁₀ FL  − 65.2 ( r  = 0.70). The values for the KRM model were TS _38kHz = 20log₁₀ FL  − 64.8 ( r  = 0.88) and TS _120kHz = 20log₁₀ FL  − 65.4 ( r  = 0.80). The agreement between the ex situ measurements and the KRM model for the mean TS was very good. In contrast, the results for the tethered method ( TS _38kHz = 20log₁₀ FL  − 69.3 [ r  = 0.42]) differed markedly from the other two methods, perhaps because of the effects of the shock-freezing procedure in air. The results of the ex situ measurements and scattering model provide basic information for studying TS and conducting acoustic surveys of black porgy, even though the tethered method must be modified.     

Age,growth and age at sexual maturity of fan ray <Emphasis Type="Italic">Platyrhina sinensis</Emphasis> (Batoidea: Platyrhinidae) in Ariake Bay,Japan

Abstract:   Age, growth and sexual maturity of the fan ray Platyrhina sinensis in Ariake Bay, Japan were determined from specimens collected from May 2002 to September 2006. Age determination was conducted by vertebral centrum analysis using soft X-radiography. Annual band pair deposition was determined by marginal increment and edge analyses. The von Bertalanffy growth model best described the overall pattern of growth for both males and females (males L _∝  = 455.2, k  = 0.56, t ₀ = −1.09; females L _∝  = 555.8, k  = 0.28, t ₀ = −1.77; L _∝ is the theoretical asymptotic total length in mm, k is the growth rate coefficient and t ₀ is the theoretical time at zero length). Parameter estimates suggest that females attain a larger asymptotic total length and grow more slowly than males. The observed maximum ages were 5 years for males and 12 years for females. Age at 50% sexual maturity was 2.1 years for males and 2.9 years for females. The results indicate that this species is relatively fast-growing, short-lived and early maturing compared with many batoid species.     

Proximate composition of some north-eastern Pacific forage fish species

To understand the relative dietary value of forage fish as prey in the Bering Sea and Gulf of Alaska, whole organisms of 13 species were analysed for proximate composition (protein, oil, ash and moisture content). Eulachon ( Thaleichthys pacificus ) were high in oil (total lipid) (16.8% to 21.4%) and low in moisture (64.6% to 70.8%). Oil in capelin ( Mallotus villosus ) ranged from 2.1% to 14.0%. Juveniles of walleye pollock ( Theragra chalcogramma ), Atka mackerel ( Pleurogrammus monopterygius ), Pacific herring ( Clupea pallasii ), and prowfish ( Zaprora silenus ) had low oil contents (< 1.8%) and high moisture contents (> 80.3%). Rankings of median proximate values illustrate the similarities. Surf smelt ( Hypomesus pretiosus ), rainbow smelt ( Osmerus mordax ), pricklebacks ( Lumpenus spp.), Atka mackerel, Pacific sand lance ( Ammodytes hexapterus ) and Pacific sandfish ( Trichodon trichodon ) ranked high in median protein content (> 15.4%). Median ash content for all species ranged from 0.6% to 3.3%. Total wet mass caloric content (kcal g^–1) was calculated for the four main species and a linear model was developed for caloric content as a function of moisture. The linear models (caloric content = b₀ + b₁ × moisture) were Pacific sand lance and Pacific sandfish (b₀ = 7.82, b₁ = – 0.09); eulachon (b₀ = 7.97, b₁ = – 0.08); and capelin (b₀ = 9.70, b₁ = – 0.11).     

Evaluation of genetic diversity of eight grouper species <Emphasis Type="Italic">Epinephelus</Emphasis> spp. based on microsatellite variations

ABSTRACT:   Genetic diversity among eight species of grouper, Epinephelus bleekeri , E. coioides , E. malabaricus , E. ongus , E. akaara , E. maculatus , E. merra and E. fuscoguttatus , was studied using six microsatellite loci, Em-01 *, Em-03 *, Em-07 *, Em-08 *, Em-10 *, and CA-07 *, with the aim of exploring the feasibility of using microsatellite data for species identification. The results showed high levels of genetic differentiation among species ( F _ST  = 0.4403 and R _ST  = 0.4954). Species identification based on fixed allelic differences was possible between E. coioides , E. ongus , and E. fuscoguttatus at Em-01 * and between E. fuscoguttatus and E. ongus at Em-08 *. Private alleles were found in all species, except for E. ongus . Pairwise F _ST ranged 0.238–0.578 ( P  < 0.008 Bonferroni correction), and Nei's genetic distance ranged 0.433–2.710. Size homoplasy was observed at Em-03 * 157 allele, which was characterized by a T–C transition at the 119th nucleotide site of PCR products. The genetic assignment test unambiguously assigned each individual to the correct species. Thus, this test can be used for species identification of unknown individuals when the multilocus genotypes of the six microsatellite loci are available. The phylogenetic (neighbor-joining) tree, which was constructed based on the genetic distance matrix, separated the eight grouper species into two main groups.     

Characterization of fast skeletal myosin from white croaker in comparison with that from walleye pollack

ABSTRACT:   Enzymatic and structural properties of white croaker fast skeletal muscle myosin were determined and compared with those of walleye pollack counterpart. Ca²⁺-ATPase activity of white croaker myosin was decreased to approximately 70% of the original activity during 1 day of storage at 0°C and pH 7.0 in 0.5 M KCl and 0.1 mM dithiothreitol, whereas that of walleye pollack was decreased to approximately 20% under the same condition. The activation energy ( E _a) for inactivation of white croaker myosin calculated by the Arrhenius plot for inactivation rate constant (K_D) was 1.2-fold higher than that of walleye pollack. While Ca²⁺-ATPase showed a similar KCl-dependency for the two species, the maximal activity was observed at pH 6.2 and 6.3 for white croaker and walleye pollack, respectively. Actin-activated myosin Mg²⁺-ATPase activity of white croaker was approximately half that of walleye pollack at 0.05 M KCl and pH 7.0, although the two myosins showed a similar affinity to F-actin with K _m of 1.7 and 1.4, respectively. Limited proteolysis with α-chymotrypsin cleaved heat-denatured white croaker myosin mainly at heavy meromyosin/light meromyosin (HMM/LMM) junction, whereas walleye pollack myosin was cleaved at several sites in LMM as well as at the HMM/LMM junction.     

An appraisal of factors constraining the success of fish stock enhancement programmes

Stocking and introduction of fish have been widely applied in Yunnan Province, China, for many years to mitigate for declines in natural stocks and commercial catches, and to restore or create new fisheries. The present paper assesses the results of activities concerned with stock enhancement programmes to evaluate the factors which have contributed towards the success of these projects. Factors such as natural lake conditions, stocking density, the age and size of fish stocked, and the mechanisms of stocking are discussed. Stocking density was evaluated using the equations Y _p = [ B ( P / B ) U _f]/ K _f or PY_p = (P × U_f)/K_f, which were based on the ecological carrying capacity of the recipient lake and other criteria. The stocking density in most lakes in Yunnan was high, but the recapture rates and total yield did not reach the predicted levels. This may have been an effect of the size of the fingerlings released (finger-lings >10 cm have a greater chance of survival). Key management measures for stocking and the ecological impacts of overstocking grass carp, Ctenopharyngodon idella (Valenciennes), are also described.     

Effects of dietary protein and lipid level, and water temperature, on the post-feeding oxygen consumption of Atlantic cod and haddock

Tank respirometry was used to study the interactive effects of protein:lipid level (55%:11% vs. 42%:16%; both diets isoenergetic) and temperature (11, 6 and 2 °C) on the magnitude and duration of specific dynamic action (SDA) in juvenile Atlantic cod and haddock. The protein:lipid level did not affect any measured variable. However, numerous temperature and species effects were observed. For example, although the maximum post-feeding oxygen consumption (30–50% above routine metabolic rate; RMR) and SDA duration (∼55–85 h; SDA_DUR) were not affected by temperature, SDA_DUR g⁻¹ of food increased from 11 to 2 °C (from ∼3 to 12 h g food⁻¹). While absolute SDA (mg O₂) decreased by ∼60–65% in cod and ∼75% in haddock from 11 to 2 °C, due to a concomitant decrease in food consumption from ∼2.0% to 0.6% body mass, SDA comprised between 3.3% and 5.2% of the dietary energy content at all temperatures. Finally, RMR at 11 and 2 °C and SDA_DUR at 2 °C were 25–35% and 25% greater in cod, respectively, as compared with haddock. These results suggest that feeding reduced protein diets at low water temperatures is unlikely to improve the growth of these species.     

Purification and characterization of the amylase from a small abalone <Emphasis Type="Italic">Haliotis sieboldii</Emphasis>

ABSTRACT:   Amylase, with MW of 59 kDa, was purified from small abalone Haliotis sieboldii by ammonium sulfate fractionation, CM Sepharose Fast Flow and Sephacryl S-100 HR chromatographies. The optimal pH and temperature of purified amylase were 6.0 and 37°C, respectively. The purified enzyme was stable at pH 6.0–8.0 and low temperatures. It was activated by Ba²⁺, Mg²⁺, Ca²⁺, Co²⁺, Ni²⁺, Mn²⁺, K⁺, Ag⁺, Na⁺ and Li⁺, but completely or partially inhibited by Al³⁺, Cu²⁺, Cd²⁺, Hg²⁺ and Zn²⁺. EDTA could completely inhibit, while iodoacetamide, N-ethylmaleimide and urea partially inhibit the purified amylase. According to the digestion mode of various polysaccharides, the purified enzyme was considered to be an α-amylase.     

Body shape variation within and among three species of darters (Perciformes: Percidae)

Abstract –  Using geometric morphometric (GM) techniques, we quantified intra and interspecific variation in female body shape using five collections each of Etheostoma caeruleum Storer, Etheostoma nigrum Rafinesque, and Etheostoma stigmaeum (Jordan). Nested multivariate analysis of variance showed significant variation in body shape among populations (Wilks' Λ = 0.0687, F _144,7585.1 = 19.35, P  < 0.0001), as well as among species (Wilks' Λ = 8.7 × 10⁻⁶, F _24,2 = 28.18, P  = 0.0348). Etheostoma caeruleum displayed greater body depth relative to both E. nigrum and E. stigmaeum , whereas E. nigrum displayed a compressed arrangement of mid-body landmarks relative to both E. stigmaeum and E. caeruleum . The broader implications of these findings highlight the value of geometric morphometrics as both an exploratory and analytical approach. Conclusions drawn from comparisons among moderately differentiated darter species in future studies of body size and shape are likely robust to intraspecific variation within species, and will permit more rigorous investigations into the ecomorphology of these benthic stream fishes.     

Age and growth of Sebastes vulpes in the coastal waters of western Hokkaido, Japan

ABSTRACT:   Age and growth of Sebastes vulpes collected from the coastal waters of western Hokkaido were studied. Observation of the otolith margin verified that annuli (outer margins of the opaque zone) were produced chiefly from July to August. This period was associated with parturition and the birth season. The maximum age estimated by the surface method was 12 years but the oldest fish was aged at 35 years by the cross-section method. The surface method was inadequate for aging of S. vulpes older than 6 years because of the underestimation of age. No significant difference was found in the parameters of the growth equations between both sexes. The von Bertalanffy growth curve combined for both sexes was as follows: SL _t  = 358.6(1 − exp^{−0.156( t +0.820)}), where SL _t is standard length (mm) at age t (after parturition in years). It seems likely that S. vulpes grows slowly and lives longer than previously thought.     

Age, growth and reproductive characteristics of round scad Decapterus maruadsi in the waters off west Kyushu, the east China Sea

ABSTRACT:   The purpose of this study was to determine the growth and reproductive characteristics of round scad Decapterus maruadsi in the East China Sea. The characteristics regarding growth and reproduction of round scad based on otolith reading and gonad histology, respectively, were estimated. The von Bertalanffy's growth model for round scad was estimated as follows:
FL _t  = 342[1 − exp{−0.55( t  + 0.58)}], (1 <  t  < 7)
where FL _t is fork length (mm) at age in years t . The maturation stage of the ovary was observed by histological techniques. June was the main spawning period; the maturation and migratory nucleus stage of the oocyte was observed when the gonad somatic index value was approximately greater than 4.     

Purification of serine carboxypeptidase from the hepatopancreas of Japanese common squid Todarodes pacificus and its application for elimination of bitterness from bitter peptides

ABSTRACT:   An acidic serine carboxypeptidase (CPase Tpa) from the hepatopancreas of Japanese common squid Todarodes pacificus was purified. Purified CPase Tpa had a molecular mass of 36 kDa on sodium dodecylsulfate–polyacrylamide gel electrophoresis, and an isoelectric point of 6.0. The optimum pH of CPase Tpa was pH 4.0. In investigating the specificity of CPase Tpa for several peptide substances, it was found that peptides with hydrophobic or bulky amino acid residues at the P₁ position reacted well. The enzymatic activity was almost completely inhibited by p -chloromercuribenzoic acid, monoiodoacetic acid, diisopropylfluorophosphate and HgCl₂. This is the basis for its grouping in the serine carboxypeptidase family (EC 3. 4. 16. 5). The substrate specificity of CPase Tpa can be used to eliminate the bitterness of bitter peptides. In this study, the bitterness-reductive effect using bitter peptides prepared by hydrolyzing soy protein, casein and corn gluten with pepsin or trypsin was tested. The bitterness of soy peptide digested with pepsin was completely eliminated by treatment with CPase Tpa, whereas the bitterness of casein digested with trypsin and corn peptide digested with pepsin were somewhat less efficient. On the basis of these results, it is anticipated that CPase Tpa would be effective in eliminating the bitterness of some bitter peptides.     

Effects of entrance design on catch efficiency of arabesque greenling traps: a field experiment in Matsumae, Hokkaido

ABSTRACT:   A field experiment was conducted in the Matsumae area of Hokkaido, Japan, during June and July 2002, to investigate the effects of different entrance designs on the catch efficiency of fish traps by fishing with commercial traps (entrance inclination angle [α] = 37°; funnel length of entrance [ L _f ] = 22 cm) and experimental traps. The experimental traps were of the same size and similar design as commercial traps, with different entrance inclination angles (trap E1: α = 46°; E2: α = 27°; E3: α = 0°; all L _f  = 22 cm) or funnel lengths (E4: α = 37°, L _f  = 8 cm). In total, 2200 fish during 200 trap hauls were captured. The catch was significantly higher using both traps E2 and the commercial trap than with trap E3 ( P  < 0.05), and the catch of trap E2 was higher than that of the commercial trap. There were no significant differences in mean fish body length or the frequency distributions of body length among trap types (E1, E2, E3 and commercial). The funnel length of the entrance also affected the catch of traps. Trap E4 had significantly higher catches than the commercial trap ( P  = 0.04) when traps were deployed for a 1-day soak time. Fish body length frequency distributions did not differ between trap E4 and the commercial trap. The results showed that catch can be greatly affected by trap entrance designs.     

Growth and mortality of the narrowbarred Spanish Mackerel, Scomberomorus commerson (Lacepède), in Omani waters

Length composition data from quarterly catches of Omani narrowband Spanish mackerel, Scomberomorus commerson (Lacepède), landed between 1987 and 1995 were used to estimate the growth, mortality and exploitation parameters of the stock. Non-linear least square fitting provided a complete set of von Bertalanffy growth estimates: L _∞ = 173.6 cm fork length; K  = 0.28; and t ₀ = −0.86 years. There were no seasonal differences among the growth estimates. The instantaneous natural mortalities determined by three independent methods based on life-history parameters were 0.35, 0.64 and 0.77. Seasonal total mortalities were calculated by the length converted catch curve method for evaluating seasonal exploitation ratios ( E ). The E -values exceeded 0.4, indicating overexploitation during almost all the seasons studied. This was supported by the large reduction in the total landings of S . commerson from 27 762 t in 1988 to 3265 t in 1993.     

Culture-based fisheries in non-perennial reservoirs of Sri Lanka: influence of reservoir morphometry and stocking density on yield

Abstract  Culture-based fish yield in non-perennial reservoirs of Sri Lanka was related to reservoir morphometry and stocking density. The reservoirs were stocked mainly with fingerlings of one Chinese and three Indian major carp species, common carp, Cyprinus carpio L., and the genetically improved farmed tilapia strain of Nile tilapia, Oreochromis niloticus (L.), at four pre-determined species combinations and a range of stocking densities [ SD (fingerlings ha⁻¹)]. Twenty-three reservoirs were harvested successfully at the end of the culture period of 2002–2003. Basic limnological and morphometric parameters, including shoreline development ( D _L ) and shoreline area ratio ( R _LA ), were estimated for each of the 23 reservoirs. Bray–Curtis similarity and non-metric multidimensional scaling using mean values of limnological data revealed that reservoirs could be ordinated into two major clusters, one with intact sample distribution due to similar trophic characteristics and the other with scattered sample distribution. Reservoirs in the cluster with similar trophic characteristics showed significant correlation ( P  < 0.05) between R _LA and total fish yield ( Y ). A multiple regression equation, Y  = −693 + 4810  R _LA  + 0.484 SD , was generated to estimate fish harvest in relation to SD .     

Age,growth and maturation of the redbelly tilapia <Emphasis Type="Italic">Tilapia zillii</Emphasis> introduced into the Haebaru Reservoir on Okinawa-jima Island

ABSTRACT:   The age, growth and maturation of the redbelly tilapia Tilapia zillii introduced into the Haebaru Reservoir on Okinawa-jima Island were studied using 2197 specimens ranging from 7.3 to 168.0 mm standard length (SL). The spawning season was estimated to be from April to August, with a peak in April and May. The first maturation sizes of females and males were estimated to be 38.1 and 33.0 mm SL, respectively. The opaque zones in otoliths that form annually were found to correlate with the spawning season. Maximum ages of females and males were 7 and 6 years, respectively. The von Bertalanffy growth formulae were expressed as: L _t  = 99{1 − exp[−0.67( t  + 0.09)]} for females and L _t  = 155{1 − exp [−0.36( t  + 0.12)]} for males. Males grew to be larger than females from the first year onward. Populations of this species are characterized by early maturation life history parameters and are thought to adapt and become established quickly after being released into new water systems. Furthermore, extermination activity in winter is thought to be an effective strategy before the newly recruited fish begin breeding in the warmer months.     

Age and growth of <Emphasis Type="Italic">Ilisha elongata</Emphasis> (Teleostei: Pristigasteridae) in Ariake Sound,Japan: comparison among populations in western North Pacific Ocean

ABSTRACT:   Elongate ilisha Ilisha elongata is a commercially important fishery resource in both Japan and China. Age and growth of the species were investigated by scale analysis from June 1996 to July 1997 in Ariake Sound, Japan. Scale annuli were formed once a year mainly between June and July. The age was 1–6 years for both male and female individuals. There was no significant difference in the regression of fork length (FL) on scale radius ( R ) between sexes by a covariance analysis. The combined sex von Bertalanffy growth equations were expressed as L _t  = 495.4 × (1 − e^{−0.3176( t  + 0.4108)}), where L _t is FL in mm at age t . Comparison of the age and growth among different populations from coastal waters in the western North Pacific Ocean suggested that the FL of the Ariake population is the smallest at each age. The spatio–temporal variations in growth are possibly relevant to environmental conditions of the growth grounds of subadults; however, there was no gradient change in the growth of I. elongata with latitude. Water temperature may not be the main factor affecting the growth of this species . The growth of the tropical population from Sarawak differs greatly from those of temperate and subtemperate populations, which implies genetic variation or phenotypic plasticity in different climate zones.     

An experimental investigation on aspects of infectious salmon anaemia virus (ISAV) infection dynamics in seawater Atlantic salmon, Salmo salar L.

This study investigated infection dynamics of infectious salmon anaemia virus (ISAV) by conducting two experiments to examine minimum infective dose and viral shedding of ISAV. In terms of minimum infective dose, the high variability between replicate tanks and the relatively slow spread of infection through the population at 1 × 10¹ TCID₅₀ mL⁻¹ indicated this dose is approaching the minimum infective dose for ISAV in seawater salmon populations. A novel qPCR assay incorporating an influenza virus control standard with each seawater sample was developed that enabled the quantity of ISAV shed from infected populations to be estimated in values equivalent to viral titres. Viral shedding was first detected at 7 days post-challenge (5.8 × 10⁻² TCID₅₀ mL⁻¹ kg⁻¹) and rose to levels above the minimum infective dose (4.2 × 10¹ TCID₅₀ mL⁻¹ kg⁻¹) on day 11 post-challenge, 2 days before mortalities in ISAV inoculated fish started. These results clearly demonstrate that a large viral shedding event occurs before death. Viral titres peaked at 7.0 × 10¹ TCID₅₀ mL⁻¹ kg⁻¹ 15 days post-infection. These data provide important information relevant to the management of ISA.     

Binding characteristics of the Zn-binding membrane protein from common carp

ABSTRACT:    This study incorporated the 43 kDa Zn-binding membrane protein isolated from common carp into liposome. The specificity and strength of the binding of ⁶⁵Zn to the 43 kDa protein-liposomes, and the binding of the ⁶⁵Zn-labeled 43 kDa protein-liposomes to laminin were studied. It was found that ⁶⁵Zn was bound to the external side of the 43 kDa protein-liposomes. Specific binding of ⁶⁵Zn to the protein-liposomes was detected. The binding parameter of Zn to the protein was found to be: maximum binding site (N_max), 76.7 pmole/µg protein (approx. 3 mole of Zn²⁺/mole); and equilibrium dissociation constant (Kd), 0.19 µM. Of the cations introduced (Ca²⁺, Cd²⁺,Co²⁺, Cr²⁺, Cu²⁺, Fe²⁺, Hg²⁺, Mg²⁺, Mn²⁺, Ni²⁺, Pb²⁺), only Co²⁺ competed significantly with Zn. The protein-liposomes were also found to bind specifically to laminin with a N_max of 1.1 pmole/µg laminin, and Kd of 4.79 µM. No significant protein-liposome binding occurred to other extracellular matrix proteins (fibronectin, fibrinogen or vitronectin). Furthermore, the binding was specifically inhibited by the Arg-Gly-Asp (RGD) peptide or GRGDSPG, while two other analogs (GRGESPG and GRADSPG) were without effect.     

Nutritional evaluation of waste date fruit as partial substitute for soybean meal in practical diets of juvenile Nile tilapia, Oreochromis niloticus L.

The potential of waste date meal (WDM; low-quality date palm, Phoenix dactylifera L.) as a carbohydrate source in formulated diets for Nile tilapia was evaluated. Four isocaloric-practical diets (15.7 kJ g⁻¹) were formulated incorporating WDM at 0, 100, 200 and 300 g kg⁻¹ levels as partial substitutes for soybean meal (SBM). These were designated D₀ [284 g crude protein (CP) and 383 g carbohydrate (CHO) kg⁻¹ diet], D₁ (279 g CP and 446 g CHO kg⁻¹ diet), D₂ (207 g CP and 495 g CHO kg⁻¹ diet) and D₃ (175 g CP and 578 g CHO kg⁻¹ diet). Each diet was fed to three replicate groups of 30 fish [20.20 ± 0.09 g (±SE)] for 75 days. No feed-related mortality was observed during the entire experimental period. Final body weight (FBW) and specific growth rate (SGR) in the different treatments were statistically not significantly different ( P  > 0.05). Protein efficiency rate (PER) was lowest in diet D₀ and increased with decrease of SBM content (D₁–D₃). A significant increase in whole body lipid content was recorded in fish fed diets D₂ and D₃. Results showed that WDM could be a substitute for SBM up to 300 g kg⁻¹ in practical Nile tilapia diets without compromising growth.