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5种石斑鱼遗传差异的RAPD分析
引用本文:区又君,吴勇,李加儿,刘楚吾.5种石斑鱼遗传差异的RAPD分析[J].南方水产,2008,4(2):56-62.
作者姓名:区又君  吴勇  李加儿  刘楚吾
作者单位:1. 中国水产科学研究院南海水产研究所,广东广州,510300
2. 中国水产科学研究院南海水产研究所,广东广州,510300;广东海洋大学水产学院,广东湛江,524025
3. 广东海洋大学水产学院,广东湛江,524025
基金项目:国家高技术研究发展计划(863计划) , 广东省科技厅科技计划 , 中国水产科学院科研项目 , 广东省科技兴渔专项基金
摘    要:运用随机扩增多态性DNA(random amplified polymorphic DNA,RAPD)技术对鞍带石斑鱼(Epinephelus lanceolatus)、驼背鲈(Cromileptes altivelis)、棕点石斑鱼(E.fuscoguttatus)、斜带石斑鱼(E.coioides)和鲑点石斑鱼(E.fario)的遗传多样性及系统发生进行了研究。从120个RAPD随机引物中筛选出扩增效果好的引物19个,分别用于5种石斑鱼基因组DNA的扩增。结果显示,5种石斑鱼平均多态性位点比率(P)分别为64.23%,72.61%,60.34%,69.97%,73.94%;个体间平均遗传相似系数(S)分别为0.8238,0.8110,0.8345,0.8277,0.8064;平均遗传距离(D)分别为0.1762,0.1890,0.1655,0.1723,0.1936;平均Nei基因多样性指数(H)分别为0.1189,0.1364,0.1028,0.1439,0.1648;平均Shannon信息指数(Hi)分别为0.1801,0.1992,0.1530,0.2100,0.2434。5个种间的遗传距离(Dxy)在0.3964~0.6085之间。

关 键 词:RAPD  鞍带石斑鱼  驼背鲈  棕点石斑鱼  斜带石斑鱼  鲑点石斑鱼
文章编号:1673-2227-(2008)02-0056-07
修稿时间:2007年12月17

RAPD analysis of genetic difference among five species of grouper
QU Youjun,WU Yong,LI Jiaer,LIU Chuwu.RAPD analysis of genetic difference among five species of grouper[J].South China Fisheries Science,2008,4(2):56-62.
Authors:QU Youjun  WU Yong  LI Jiaer  LIU Chuwu
Institution:OU Youjun,WU Yong,LI Jiaer,LIU Chuwu(1.South China Sea Fisheries Research Institute,Chinese Academy of Fishery Sciences,Guangzhou 510300,China;2.Fisheries College,Guangdong Ocean University,Zhanjiang 524025,China)
Abstract:Genetic diversity and molecular evolution of five species of grouper,viz.Epinephelus lanceolatus,Cromileptes altivelis,E.fuscoguttatus,E.coioides and E.fario,were detected using RAPD technique.A total 120 random primers were evaluated for the usefulness.And thereinto,19 random primers were selected according to the effect of PCR of genomic DNA of 5 species of grouper.The results showed as the followings:the polymorphic loci ratio in E.lanceolatus,C.altivelis,E.fuscoguttatus,E.coioides and E.fario(P)were 64.23%,72.61%,60.34%,69.97% and 73.94%,respectively.The mean genetic similarity index of intra-species(S)were 0.8238,0.8110,0.8345,0.8277,0.8064,respectively,the mean genetic distances of intra-species(D)were 0.1762,0.1890,0.1655,0.1723 and 0.1936,respectively,Nei's gene diversity(H)were 0.1189,0.1364,0.1028,0.1439 and 0.1648,respectively,and Shannon's information index(Hi)were 0.1801,0.1992,0.1530,0.2100,0.2434,respectively.The mean genetic distances of inter-species(Dxy)were between 0.3964~0.6085.
Keywords:RAPD  grouper  Epinephelus lanceolatus  Cromileptes altivelis  E  fuscoguttatus  E  coioides  E  fario
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