茴香轮作调控土壤细菌群落缓解三七连作障碍的效应及机制

三七是我国特有的中药材，但连作障碍严重制约了其产业发展，轮作是生产上最常用且有效的缓解措施。本研究在三七收获后的土壤上轮作茴香，通过测定轮作土壤水浸液对三七存苗的影响来评价轮作对三七连作障碍的缓解效果，并从轮作对土壤细菌群落的影响方面深入阐释轮作缓解连作障碍的机制。结果表明，茴香轮作后的土壤水浸液可以显著提高三七的存苗率。土壤细菌分析表明，茴香轮作后土壤细菌群落发生了明显改变。细菌的丰富度增加，相对丰度>1%的优势菌门变形菌门Proteobacteria和放线菌门Actinobacteria的相对丰度呈增加趋势。属水平上，轮作茴香使66个属的相对丰度显著增加，其中相对丰度>0.2%的优势菌属有14个；30个属的相对丰度显著降低，其中优势菌属有8个，总体上看相对丰度显著增加的属多于显著降低的属。在相对丰度显著增加的优势菌属中包含常见的拮抗菌属假单胞菌属Pseudomonas和芽孢杆菌属Bacillus细菌。本研究也分离到2株假单胞菌和1株芽孢杆菌对三七根腐病菌腐皮镰刀菌Fusarium solani和Monographella cucumerina具有明显的拮抗活性。因此，轮作茴香可以改善三七连作土壤细菌群落结构，增加土壤中拮抗细菌的丰度，提高三七的存苗率。生产上利用茴香与三七轮作对缓解连作障碍具有一定潜力。     

辣椒细菌性果实条斑病菌生物学特性及抑菌药剂筛选

研究辣椒细菌性果实条斑病菌的生物学特性,对病原菌进行室内药剂筛选,旨在为田间病害规律研究和病害防治提供依据。采用紫外分光光度计测定病原菌在不同温度、pH、NaCl浓度下的生长速率。采用滤纸片抑菌圈法对病原菌进行室内药剂筛选试验。结果表明,辣椒细菌性果实条斑病菌最适生长温度为28℃,最适pH 7.0,病原菌的耐盐性为12%。18种供试药剂在药剂推荐使用剂量范围内,四霉素、乙蒜素、77%志信、氯溴异氰尿酸4种药剂对病原菌有抑菌效果,对这4种药剂进行毒力测定,结果表明四霉素的毒力较强,EC₅₀值为11.75 mg/L,毒力强于其他3种试剂,四霉素可作为田间防治药剂的首选。     

A bacterium with close genetic identity to Pseudomonas mandelii associated with spring fish kills in wild bluegill Lepomis macrochirus Rafinesque and pumpkinseed sunfish Lepomis gibbosus (Linnaeus)

Pseudomonas fluorescens are known bacterial pathogens in fish. The P. fluorescens group contains at least nine different bacterial species, although species from fish have rarely been differentiated. Two isolated fish kills affecting wild bluegills, Lepomis macrochirus Rafinesque, and pumpkinseed sunfish, Lepomis gibbosus (Linnaeus), occurred in the spring of 2015 during cool water temperatures (12.5°C–15.5°C). Disease signs included severe bacteraemia with rare gross external signs. Pure bacterial cultures isolated from kidneys of all affected fish were identified as P. fluorescens using the API 20NE system, while no bacteria were isolated from asymptomatic fish. To further identify the species of bacterium within the P. fluorescens complex, genetic analysis of the 16S rRNA, rpoD and gyrB genes was conducted. DNA sequences of bacterial isolates from both mortality events were identical and had close identity (≥99.7%) to Pseudomonas mandelii. Although likely widespread in the aquatic environment, this is the first report of a bacterium closely resembling P. mandelii infecting and causing disease in fish. The bacterium grew at temperatures between 5°C and 30°C, but not at 37°C. It is possible that infections in fish were a result of immunosuppression associated with spring conditions combined with the psychrotrophic nature of the bacterium.     

猕猴桃细菌性溃疡病研究进展

笔者总结了近年来国内外学者对猕猴桃细菌性溃疡病的研究和发现，详细介绍了猕猴桃细菌性溃疡病的症状、危害和传播途径以及致病菌Pseudomonas syringae pv. actinidiae的特征、分类和起源，分析了其可能的致病机理并总结了猕猴桃的抗病性研究。基于目前对猕猴桃细菌性溃疡病的防治方法和相关研究发现，展望了猕猴桃细菌性溃疡病的研究方向和防治措施，提出采取预防致病菌传入、增强树势和药剂防治相结合的防治措施，为以后的研究和生产实践提供了理论依据。     

生防菌株PF-1基于全基因组数据的分类鉴定及拮抗能力分析

基于全基因组数据,确定生防菌株PF-1的分类地位,验证其对植物病原菌的拮抗作用以及挖掘其潜在的生防功能。通过全基因组中16S rRNA基因序列的系统发育分析及基因组分析方法确定生防菌株PF-1的分类地位,通过平板对峙方法研究其对马铃薯枯萎病菌和棉花黄萎病菌的拮抗能力;利用antiSMASH软件分析和预测菌株PF-1的抗生素相关基因并挖掘其生防潜力。基于16S rRNA基因序列的系统发育分析及基因组分析结果,PF-1被鉴定为防御假单胞菌(Pseudomonas protegens),同时发现PF-1基因组中存在15种次生代谢产物基因簇,具有良好的抑制病原菌生长和提高植物抗病性的能力,在农业中具有良好的应用前景。     

具有III型分泌系统的Pseudomonas moraviensis FP1761植物益生功能及其全基因组分析

 本研究从节瓜根际分离到一株具有防病促生功能的荧光类假单胞菌FP1761。该菌株对部分植物病原真菌和细菌具有拮抗能力,能够解钾、解有机磷和无机磷,可产生氨、蛋白酶、嗜铁素、吲哚乙酸。生物测定表明菌株FP1761可显著促进小麦生长。生理生化、平均核苷酸相似度、16S rDNA和多基因分析将FP1761鉴定为摩拉维亚假单胞菌(Pseudomonas moraviensis)。菌株FP1761基因组草图全长6.12 Mb,(G+C)含量为59.9%,共编码5467个基因序列。将该菌株与种内3个代表性菌株进行泛基因组和核心基因组分析,共产生 4 357个共有基因,菌株FP1761特有基因327个。利用antiSMASH对菌株次生代谢基因簇进行预测,发现其含有8个潜在的次生代谢产物基因簇。其中两个基因簇与嗜铁素pyoverdine合成相关,未见聚酮类合成基因。基因组分析发现,该菌株具有与病原性假单胞菌相似的III型分泌系统,但丢失了效应蛋白调控因子hrpS和转运相关的hrpH和hrpK1基因。对全基因组扫描,菌株FP1761仅保留了病原性假单胞菌的保守效应蛋白AvrE和HopAA1-1。FP1761是目前已发现的唯一具有III型分泌系统的摩拉维亚假单胞菌。本研究表明摩拉维亚假单胞菌FP1761具有潜在的植物防病促生功能,但其III型分泌系统与植物益生互作机制有待进一步解析。     

自毒物质对羟基苯甲酸降解细菌ZH2的分离与应用

自毒物质是造成植物连作障碍的主要因子,研究旨在筛选能够降解土壤中自毒物质的细菌。采用选择性分离方法从土壤中筛选自毒物质对羟基苯甲酸降解菌;结合形态特征、生理生化特征和16S rRNA测序鉴定菌种;采用紫外分光光度法测定菌株降解对羟基苯甲酸能力,并通过盆栽实验验证解毒效果。结果表明,分离到1株有降解对羟基苯甲酸能力的菌株,编号ZH2,经鉴定为绿针假单胞菌(Pseudomonas chlororaphis)。在纯培养条件下,当对羟基苯甲酸浓度为5 mg/mL时,ZH2能在培养72 h时将其降解97%。盆栽条件下,当基质中对羟基苯甲酸浓度为10 mg/g时,ZH2能有效缓解对羟基苯甲酸对黄瓜的生长抑制作用。该研究从土壤中分离到能够降解对羟基苯甲酸的绿针假单胞菌,具有应用于连作障碍防控的潜在价值。     

Cherry picking by pseudomonads: After a century of research on canker,genomics provides insights into the evolution of pathogenicity towards stone fruits

Bacterial canker disease is a major limiting factor in the growing of cherry and other Prunus species worldwide. At least five distinct clades within the bacterial species complex Pseudomonas syringae are known to be causal agents of the disease. The different pathogens commonly coexist in the field. Reducing canker is a challenging prospect as the efficacy of chemical controls and host resistance may vary against each of the diverse clades involved. Genomic analysis has revealed that the pathogens use a variable repertoire of virulence factors to cause the disease. Significantly, strains of P. syringae pv. syringae possess more genes for toxin biosynthesis and fewer encoding type III effector proteins. There is also a shared pool of key effector genes present on mobile elements such as plasmids and prophages that may have roles in virulence. By contrast, there is evidence that absence or truncation of certain effector genes, such as hopAB, is characteristic of cherry pathogens. Here we highlight how recent research, underpinned by the earlier epidemiological studies, is allowing significant progress in our understanding of the canker pathogens. This fundamental knowledge, combined with emerging insights into host genetics, provides the groundwork for development of precise control measures and informed approaches to breed for disease resistance.     

产2,4-二乙酰基间苯三酚的微生物研究进展

在土壤环境中,大多数2,4-二乙酰基间苯三酚(2,4-DAPG)是由荧光假单胞菌(Pseudomonas fluorescens)产生的。它在生物防治中具有重要作用。对近年来2,4-DAPG的生物合成及调控机理,2,4-DAPG在诱导系统抗性(ISR)的机制,2,4-DAPG的生物反应模式、生态效应,荧光假单胞菌农田生物防治应用实例等相关研究进行了综述。     

除草剂莠去津降解菌SFAD3的分离鉴定及其土壤修复潜力

为获得能够修复除草剂莠去津污染土壤的高效降解菌,采用摇瓶富集法、平板分离法从莠去津过量使用的土壤中分离得到降解菌SFAD3,通过形态学、生理生化特征观察以及16S rDNA和ITS序列分析进行种类鉴定,测定获得菌株的最适降解条件,并通过土壤接种和盆栽试验验证菌株对莠去津污染土壤的修复作用。结果表明,菌株SFAD3最终被鉴定为门多萨假单胞菌Pseudomonas mendocina,该菌株培养30 d时对污染土壤中50 mg/kg莠去津的降解率可达72.6%;菌株SFAD3在MM液体培养基中最适降解条件为温度37℃、pH 7、莠去津初始浓度6.25 mg/L、接种量2%,对莠去津降的降解率为50.0%～72.2%;与仅有莠去津的处理相比,添加有SFAD3发酵液的处理20 d后芝麻的株高、根长、湿重和干重能够显著恢复,并且该菌对芝麻还具有一定的促生作用。表明降解菌SFAD3在修复莠去津污染土壤方面具有潜在的应用价值。