SnToxA,SnTox1, and SnTox3 originated in Parastagonospora nodorum in the Fertile Crescent

The centre of origin of the globally distributed wheat pathogen Parastagonospora nodorum has remained uncertain because only a small number of isolates from the Fertile Crescent were included in earlier population genetic and phylogeographic studies. We isolated and genetically analysed 193 P. nodorum strains from three naturally infected wheat fields distributed across Iran using 11 neutral microsatellite loci. Compared to previous studies that included populations from North America, Europe, Africa, Australia, and China, the populations from Iran had the highest genetic diversity globally and also exhibited greater population structure over smaller spatial scales, patterns typically associated with the centre of origin of a species. Genes encoding the necrotrophic effectors SnToxA, SnTox1, and SnTox3 were found at a high frequency in the Iranian population. By sequencing 96 randomly chosen Iranian strains, we detected new alleles for all three effector genes. Analysis of allele diversity showed that all three effector genes had higher diversity in Iran than in any population included in previous studies, with Iran acting as a hub for the effector diversity that was found in other global populations. Taken together, these findings support the hypothesis that P. nodorum originated either within or nearby the Fertile Crescent with a genome that already encoded all three necrotrophic effectors during its emergence as a pathogen on wheat. Our findings also suggest that P. nodorum was the original source of the ToxA genes discovered in the wheat pathogens Phaeosphaeria avenaria f. sp. tritici 1, Pyrenophora tritici-repentis, and Bipolaris sorokiniana.     

Variation in juvenile steelhead (Oncorhynchus mykiss) dispersal in relation to age and growth performance

Volitional dispersal is a ubiquitous strategy characteristic of species across major faunal groups. Dispersal during the juvenile life stage is of interest because early performance can be critical for determining future success (survival/reproduction). For salmonids, dispersal can influence local density, competition, individual growth and survival, though drivers of dispersal at meso-scales are rarely quantified. Here, we evaluate dispersal of tagged juvenile steelhead (Oncorhynchus mykiss) through habitat units in extended stream reaches (500 m) at sites across a watershed from July to October 2017. Our aim was to quantify the frequency and spatial extent of dispersal, identify links to biotic and abiotic factors, evaluate the implications for individual growth and test for associations between dispersal and migration initiation. Dispersal rates varied between sites, but were consistently higher for age 1+ than for age 0 steelhead (avg. 21% vs. 6% respectively). Age 1+ dispersal probability was positively correlated with time between recapture events and body mass, and negatively correlated with growth rate, maximum temperature experienced and age 1+ density. At sites where there appeared to be growth benefits to remaining sedentary compared to moving, proportionally fewer fish performed dispersal. We found no links between dispersal and timing or probability of migration initiation the following spring. Our results support the hypothesis that although dispersal over intermediate scales (10–1,000 m) might be rare, it could be an important strategy that permits fish to seek out better opportunities (foraging, shelter or otherwise) in underutilised areas.     

Individual-based modeling highlights the importance of mortality and landscape structure in measures of functional connectivity

Landscape Ecology - Functional landscape connectivity is vital for the conservation of wildlife species. Landscape connectivity models often overlook factors such as mortality and asymmetry in...     

Landscape-level naturalness of conservation easements in a mixed-use matrix

Context

With underrepresentation of habitats in publicly protected areas, attention has focused on the function of alternative land conservation mechanisms. Private conservation easements (CEs) have proliferated in the United States, yet assessing landscape-level function is confounded by varying extent, resolution, and temporal scale.

Objectives

We developed and tested an assessment tool to evaluate interacting spatial, social, and environmental attributes of easements relative to the degree of human modification (HM). We hypothesized that on both private and public conservation properties HM would be lower than on non-conserved parcels, and that for fine-scale features (most CEs), the level of HM would be driven by the variables used to create the coarser scale HM measure.

Methods

Variation in HM between private, public, and non-conserved was tested via pairwise parcel sampling. Composition was evaluated using multiple geographic bounds and edge characteristics. We assessed both environmental and social predictors using multinomial logistic regression.

Results

Privately conserved lands did not differ significantly from non-conserved lands. Publicly conserved lands had lower HM than both privately conserved and non-conserved lands. Edge contrast was similar between private and matched non-conserved patches. The level of HM was not driven by distance to roads, or by elevation in this mixed-use setting.

Conclusions

Variation in tests for differences, land characteristics, and HM variables confirmed the significantly lower HM of publicly protected lands, and opens the question as to naturalness of easements in some contexts. CEs in this location may be representative of the mixed rural-forested landscape instead of more natural land cover.

     

Survival and respiration of marbled rabbitfish (Siganus rivulatus) fingerlings at various oxygen tensions

Marbled rabbitfish, Siganus rivulatus, is an economically valuable herbivorous fish and a potential candidate for warmwater aquaculture. This study was carried out to: (1) assess the effect of various oxygen concentrations on survival and behaviour of S. rivulatus fingerlings and (2) investigate the response of S. rivulatus to hypoxia and determine its critical oxygen tension (P_crit). In the first experiment, groups of rabbitfish (15 fish per group) were maintained for 1 h in waters of various oxygen concentrations. They were then transferred to well‐aerated tanks and observed for 72 h. Survival was recorded, fish behaviour at low oxygen concentrations observed, and LC₅₀ after 1‐h hypoxia and 72‐h recovery evaluated. In the second experiment, a series of stop‐flow respirometry experiments were performed during which dissolved oxygen was allowed to drop to 0.5 mg L^?1 and respiration rate recorded at various oxygen concentrations. In the first experiment, all fish survived for 1 h at oxygen concentration of 1.44 mg L^?1 and greater, but started dying at oxygen concentrations below 0.65 mg L^?1 (16% survival). The LC₅₀ of S. rivulatus fingerlings was 0.6 mg L^?1. Results of the second experiment showed that S. rivulatus is an oxyregulator until P_crit (1.7 mg L^?1 O₂) is reached, becoming an oxyconformer below this concentration. Findings allow for a better understanding of environmental oxygen tolerances and minimum acceptable oxygen concentration in rabbitfish aquaculture.     

The homogenizing influence of agriculture on forest bird communities at landscape scales

Landscape Ecology - Agricultural expansion is a principal driver of biodiversity loss, but the impacts on community assembly in agro-ecosystems are less clear, especially across regional scales at...     

Tackling fall armyworm (Spodoptera frugiperda) outbreak in Africa: an analysis of farmers’ control actions

Abstract

Since its emergence in Africa in 2016, fall armyworm (FAW) has spread rapidly and poses a severe threat to the food security and livelihood of millions of smallholder farmers in the continent. Using survey data from Ghana and Zambia, we examined FAW prevention and control methods implemented by farm households and their impacts on maize output and household consumption of self-produced maize. The main control methods used included pesticide application and handpicking of larvae, while access to information on FAW was a key driver behind the implementation of the control methods. Results from an endogenous switching regression showed that the implementation of a FAW management strategy significantly enhanced maize yield and households’ own maize consumption. When disentangling the impacts of the main control methods, we found that the combination of pesticide application and handpicking of larvae produced the highest yield gain of 125%. We concluded that the current interventions put in place by farmers to tackle FAW infestations are providing positive outcomes, but successful management of the pest will require more actions, including raising awareness to enhance the adoption of control interventions and exploring other control options.     

Disinfection of almaco jack (Seriola rivoliana Valenciennes) eggs: Evaluation of three chemicals

Almaco jack (Seriola rivoliana Valenciennes) is an excellent candidate for aquaculture due to its fast growth rate and high market value. While S. rivoliana have adapted well to captivity, survival at early life stages can be improved to increase profitability during production. A wide range of variables cause larval mortalities but high bacterial loads in rearing tanks are often correlated with these losses. The aim of this study was to investigate the effect of egg disinfection on bacterial load and hatch rate of S. rivoliana. Disinfectants tested included formalin (F100 and F200; 100 and 200 mg/L, respectively, for 60 min), hydrogen peroxide (HPO; 300 mg/L for 10 min) and peracetic acid/hydrogen peroxide (PAA/HPO; 15.7 mg/L/39.6 mg/L for 1 min). Concentrations and contact times were determined based on current use in marine aquaculture and preliminary trials. Eggs treated with HPO and F100 had significantly higher hatch rates than the untreated control group. All treatments significantly decreased total Vibrio counts compared to untreated eggs; however, total bacterial counts were only decreased following treatments with PAA/HPO and F200. To prevent egg mortality due to bacterial overgrowth, consideration should be given to the use of surface disinfection using HPO or F100. Future studies should investigate the use of peracetic‐based products at lower doses.     

Foodfish Production Strategies Using 13‐cm and 19‐cm Hybrid Catfish, ♀Ictalurus punctatus × ♂Ictalurus furcatus

Most hybrid catfish, ♀Ictalurus punctatus × ♂Ictalurus furcatus, producers stock 18‐ to 19‐cm fingerlings in single‐batch production. While stocking smaller fingerlings would be less expensive, the economic trade‐offs of using smaller fingerlings is unknown. Two sizes of hybrid catfish fingerlings (13‐cm and 19‐cm) were stocked in single‐size treatments at 9884 head/ha and a multi‐size treatment with each size stocked at 9884 head/ha (total 19,768 head/ha). In the 13‐cm and 19‐cm single‐size treatments, 87 and 98%, respectively, reached market size in one season. In the multi‐size treatment, 77% of all fish stocked reached market size, demonstrating that more than half of the 13‐cm fish reached market size in this treatment. Gross, net, and marketable yields were significantly greater in the multi‐size treatment when compared to the 13‐cm or 19‐cm single‐size treatments, but were not significantly different between the two single‐size treatments. The 19‐cm single‐size treatment resulted in greater break‐even prices and economic risk than the other two treatments. This study demonstrated that 13‐cm hybrid catfish fingerlings can be raised economically in both single‐ and multi‐size production systems in the southern USA.