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1.
Ahmed Siah Emilie Knutsen Zina Richmond Meghan Mills Kathleen Frisch James F. F. Powell Øyvind Brevik Henrik Duesund 《Journal of fish diseases》2020,43(8):955-962
During the last decade, Piscine orthoreovirus was identified as the main causative agent of heart and skeletal muscle inflammation (HSMI) in Atlantic Salmon, Norway. A recent study showed that PRV-1 sequences from salmonid collected in North Atlantic Pacific Coast (NAPC) grouped separately from the Norwegian sequences found in Atlantic Salmon diagnosed with HSMI. Currently, the routine assay used to screen for PRV-1 in NAPC water and worldwide cannot differentiate between the two groups of PRV-1. Therefore, this study aimed at developing a real-time polymerase chain reaction (RT-qPCR) assay to target the PRV-1 genome segments specific for variants associated with HSMI. The assay was optimized and tested against 71 tissue samples collected from different regions including Norway, Chile and both coast of Canada and different hosts farmed Atlantic Salmon, wild Coho Salmon and escaped Atlantic Salmon collected in British Columbia, West Coast of Canada. This assay has the potential to be used for screening salmonids and non-salmonids that may carry PRV-1 potentially causing HSMI. 相似文献
2.
Mohamed Aït Hamza Nadine Ali Johannes Tavoillot Odile Fossati-Gaschignard Hassan Boubaker Abdelhamid El Mousadik Thierry Mateille 《BMC ecology》2017,17(1):41
Background
Root-knot nematodes (RKN) are major pest of olive tree (Olea europaea ssp. europaea), especially in nurseries and high-density orchards. Soil samples were collected from main olive growing areas of Morocco, to characterize Meloidogyne species and to discuss the contribution of biotic and abiotic factors in their spatial distribution.Results
RKN were found in 159 soil samples out of 305 from nurseries (52.1% occurrence) and in 11 out of 49 soil samples from orchards (23.2% occurrence). Biochemical and molecular characterisation (PAGE esterase and SCAR) revealed the dominance of M. javanica both in nurseries and orchards with minor presence of M. incognita only in nurseries, and M. arenaria in only one nursery. RKN were distributed on aggregated basis. Frequent presence of M. javanica in orchards might have come from nurseries. In contrast, the detection of M. incognita in nurseries alone suggests that this species could not reproduce in orchards because of either the competition with other plant-parasitic nematodes or unfit local habitats. The impact of environmental variables (climate, habitat origin and physicochemical characteristics of the substrates) on the distribution of Meloidogyne species is also discussed.Conclusion
Olive nurseries in Morocco are not able to guarantee the safety of rooted plants. As a result, olive production systems are exposed to strong RKN invasion risks. Consequently, the use of healthy substrates in nurseries may prevent plant-parasitic nematode induction in orchards.3.
Mohamed S. Hassaan Eman Y. Mohammady Mohamed R. Soaudy Amina A. S. Abdel Rahman 《Aquaculture Nutrition》2019,25(4):841-853
A 3 × 2 factorial experiment was designed to evaluate the effect of different ratios of fish meal (FM): sunflower meal (SFM) with or without exogenous xylanase supplementation on growth, feed utilization, digestive enzymes activities, apparent digestibility, intestinal and liver morphology and chemical composition of Nile tilapia, Oreochromis niloticus. Three isonitrogenous (329.80 g/kg of crude protein) and isoenergetic (18.46 MJ/kg gross energy) experimental diets were formulated as SFM1 (FM:SFM = 2:1), SFM2 (FM:SFM = 1:1) and SFM3 (FM:SFM = 1:2) based on protein content. Each diet was supplemented with 0 or 0.5 g/kg of exogenous xylanase and was fed to triplicate groups of twelve fish (with initial weight, 1.31 ± 0.02 g) for 84 days. After 84 days of feeding period, the highest weight gain, specific growth rate, protein efficiency, protein productive value and the best feed conversion ratio were recorded in fish fed either SFM1 or SFM2 supplemented with exogenous xylanase. Whereas lowest growth performance was recorded in fish fed SFM2 and SFM3 un‐supplemented with xylanase. The highest activities of chymotrypsin, trypsin, lipase, amylase, alkaline phosphatase and cholecystokinin were observed in fish fed SFM1 and SFM2 diets supplemented with xylanase. The highest ADCs of dry matter, protein, lipid and digestible energy were recorded in fish fed SFM1 and SFM2 diets supplemented with exogenous xylanase. Supplementation of exogenous xylanase improved muscularis mucosa thickness, height of mucosal folds and enterocytes of intestinal fish. Addition of exogenous xylanase increased the calcium and phosphorus retention. Results of this study indicated that the addition of exogenous xylanase to diet containing high inclusion level of sunflower meal improved growth, digestive enzymes, nutrient digestibility, histological morphometric of liver and intestine and nutrient retention. 相似文献
4.
Elhalag Kamel Elbadry Nader Farag Shahenda Hagag Mohamed Hussien Ahmed 《植物病害和植物保护杂志》2020,127(6):855-871
Journal of Plant Diseases and Protection - Recent observations of increasing incidences of potato plants showing blackleg symptoms have caused serious concern for potato growers and traders in... 相似文献
5.
Luc Doyen Christophe Béné Michel Bertignac Fabian Blanchard Abdoul Ahad Cissé Catherine Dichmont Sophie Gourguet Olivier Guyader Pierre‐Yves Hardy Sarah Jennings Lorne Richard Little Claire Macher David Jonathan Mills Ahmed Noussair Sean Pascoe Jean‐Christophe Pereau Nicolas Sanz Anne‐Maree Schwarz Tony Smith Olivier Thébaud 《Fish and Fisheries》2017,18(6):1056-1072
Reconciling food security, economic development and biodiversity conservation is a key challenge, especially in the face of the demographic transition characterizing many countries in the world. Fisheries and marine ecosystems constitute a difficult application of this bio‐economic challenge. Many experts and scientists advocate an ecosystem approach to manage marine socio‐ecosystems for their sustainability and resilience. However, the ways by which to operationalize ecosystem‐based fisheries management (EBFM) remain poorly specified. We propose a specific methodological framework—viability modelling—to do so. We show how viability modelling can be applied using four contrasted case‐studies: two small‐scale fisheries in South America and Pacific and two larger‐scale fisheries in Europe and Australia. The four fisheries are analysed using the same modelling framework, structured around a set of common methods, indicators and scenarios. The calibrated models are dynamic, multispecies and multifleet and account for various sources of uncertainty. A multicriteria evaluation is used to assess the scenarios’ outcomes over a long time horizon with different constraints based on ecological, social and economic reference points. Results show to what extent the bio‐economic and ecosystem risks associated with the adoption of status quo strategies are relatively high and challenge the implementation of EBFM. In contrast, strategies called ecoviability or co‐viability strategies, that aim at satisfying the viability constraints, reduce significantly these ecological and economic risks and promote EBFM. The gains associated with those ecoviability strategies, however, decrease with the intensity of regulations imposed on these fisheries. 相似文献
6.
Yi Zhao Shuxia Wu Roland Bol Mansoor Ahmed Bughio Wenliang Wu Yecui Hu Fanqiao Meng 《植物养料与土壤学杂志》2020,183(2):155-168
Intensive vegetable production in greenhouses has rapidly expanded in China since the 1990s and increased to 1.3 million ha of farmland by 2016, which is the highest in the world. We conducted an 11‐year greenhouse vegetable production experiment from 2002 to 2013 to observe soil organic carbon (SOC) dynamics under three management systems, i.e., conventional (CON), integrated (ING), and intensive organic (ORG) farming. Soil samples (0–20 and 20–40 cm depth) were collected in 2002 and 2013 and separated into four particle‐size fractions, i.e., coarse sand (> 250 µm), fine sand (250–53 µm), silt (53–2 µm), and clay (< 2 µm). The SOC contents and δ13C values of the whole soil and the four particle‐size fractions were analyzed. After 11 years of vegetable farming, ORG and ING significantly increased SOC stocks (0–20 cm) by 4008 ± 36.6 and 2880 ± 365 kg C ha?1 y?1, respectively, 8.1‐ and 5.8‐times that of CON (494 ± 42.6 kg C ha?1 y?1). The SOC stock increase in ORG at 20–40 cm depth was 245 ± 66.4 kg C ha?1 y?1, significantly higher than in ING (66 ± 13.4 kg C ha?1 y?1) and CON (109 ± 44.8 kg C ha?1 y?1). Analyses of 13C revealed a significant increase in newly produced SOC in both soil layers in ORG. However, the carbon conversion efficiency (CE: increased organic carbon in soil divided by organic carbon input) was lower in ORG (14.4%–21.7%) than in ING (18.2%–27.4%). Among the four particle‐sizes in the 0–20 cm layer, the silt fraction exhibited the largest proportion of increase in SOC content (57.8% and 55.4% of the SOC increase in ORG and ING, respectively). A similar trend was detected in the 20–40 cm soil layer. Over all, intensive organic (ORG) vegetable production increases soil organic carbon but with a lower carbon conversion efficiency than integrated (ING) management. 相似文献
7.
Abdelhaleem Fahmy Salah Amin Ahmed Mostafa Basiouny Mohamed Elsayed Ibraheem Heba Fathy 《Journal of Soils and Sediments》2020,20(3):1742-1753
Journal of Soils and Sediments - Bedload transport discharge is important in river engineering and morphodynamics. The Meyer-Peter and Müller (MPM) equation for determining bedload transport... 相似文献
8.
9.
Mahmoud A.O. Dawood Mahmoud S. Gewaily Ali A. Soliman Mustafa Shukry Asem A. Amer Elsayed M. Younis Abdel-Wahab A. Abdel-Warith Hien Van Doan Adel H. Saad Mohamed Aboubakr Hany M.R. Abdel-Latif Sabreen E. Fadl 《Marine drugs》2020,18(12)
Marine-derived substances are known for their beneficial influences on aquatic animals’ performances and are recommended to improve intestinal health, immunity, and anti-oxidative status. The present study investigates the role of chitosan nanoparticles on the intestinal histo-morphometrical features in association with the health and immune response of Grey Mullet (Liza ramada). Chitosan nanoparticles are included in the diets at 0, 0.5, 1, and 2 g/kg and introduced to fish in a successive feeding trial for eight weeks. The final body weight (FBW), weight gain (WG), and specific growth rate (SGR) parameters are significantly increased while feed conversion ratio (FCR) decreases by chitosan nanoparticles compared to the control (p < 0.05). The morphometric analysis of the intestines reveals a significant improvement in villus height, villus width, and the number of goblet cells in chitosan-treated groups in a dose-dependent manner. Additionally, there is a positive correlation between the thickness of the enterocyte brush border and the chitosan dose, referring to an increasing absorptive activity. Histologically, the intestinal wall of Grey Mullet consists of four layers; mucosa, sub-mucosa, tunica muscularis (muscular layers), and serosa. The histological examination of the L. ramada intestine shows a normal histo-morphology. The epithelial layer of intestinal mucosa is thrown into elongated finger-like projections, the intestinal villi. The values of hemoglobin, hematocrit, red blood cells (RBCs), total protein (TP), albumin, and globulin are significantly increased in fish fed 1, and 2 g/kg of chitosan nanoparticles compared to fish fed 0 and 0.5 g/kg (p < 0.05). The highest levels of TP and albumin are observed in fish fed 1 g/kg diet (p < 0.05). The lysozyme activity and phagocytic index are significantly enhanced by feeding chitosan nanoparticles at 0.5, 1, and 2 g/kg, whereas the phagocytic activity is improved in fish fed 1 and 2 g/kg (p < 0.05). The highest lysozyme activity and phagocytic index are observed in fish fed 1 g/kg. SOD is significantly activated by feeding chitosan nanoparticles at 1 g/kg. Simultaneously, glutathione peroxidase (GPx) and catalase (CAT) activities also are enhanced by feeding chitosan at 1 and 2 g/kg, compared to fish fed 0 and 0.5 g/kg (p < 0.05). The highest GPx and CAT activities are observed in fish fed 1 g/kg (p < 0.05). Conversely, the malondialdehyde (MDA) levels are decreased by feeding chitosan at 1 and 2 g/kg, with the lowest being in fish fed 1 g/kg (p < 0.05). To summarize, the results elucidate that L. ramada fed dietary chitosan nanoparticles have a marked growth rate, immune response, and anti-oxidative response. These improvements are attributed to the potential role of chitosan nanoparticles in enhancing intestinal histo-morphometry and intestinal health. These results soundly support the possibility of using chitosan nanoparticles at 1–2 g/kg as a feasible functional supplement for aquatic animals. 相似文献
10.
M M HASOBA Ahmed 《干旱区科学》2020,12(4):609-617
Savanna woodlands in Sudan host great biodiversity, provide a plethora of ecosystem goods and services to local communities, and sustain numerous ecological functions. Although the importance of the Acacia trees in these areas is well known, up-to-date information about these woodlands' diversity is limited and changes in their woody vegetation composition, density, diversity and relative frequency are not monitored over time. This study explored tree diversity and stand stage structure in Nuara Reserved Forest, a typical savanna woodland ecosystem in southeastern Sudan. A total of 638 circular sample plots (1000 m2 for each) were established using a systematic sampling grid method. The distance between plots was 200 m. In each plot, all living trees with diameter at breast height (DBH) ≥5.00 cm were identified and counted, and their DBH values were recorded. From these data, tree composition, diversity, density and stage structure were assessed. There were 12,259 individual trees representing four species (Acacia seyal, Balanites aegyptiaca, Acacia Senegal and Acacia mellifera) that belong to two families. The dominant species was Acacia seyal. Average tree density was 191 trees/hm2 and the Shannon-Weiner index for trees diversity was 0.204. Overall, young trees comprised 86.30% of the forest. The state of tree richness and density in the study area was low compared to other similar environments in the region and around the world. We recommended adoption of a proper management system that includes monitoring of woody vegetation diversity in this forest, and management actions to enhance tree diversity and sustain ecosystem services to local communities. In addition to care for the dominant Acacia seyal stands, more attention and conservation should be devoted to reestablishing Acacia senegal and Acacia mellifera trees because of their high ecological and economic values for local communities. 相似文献