The pelagic habitat analysis module for ecosystem‐based fisheries science and management

We have developed a set of tools that operate within an aquatic geographic information system to improve the accessibility, and usability of remote‐sensed satellite and computer‐modeled oceanographic data for marine science and ecosystem‐based management. The tools form the Pelagic Habitat Analysis Module (PHAM), which can be applied as a modeling platform, an investigative aid in scientific research, or utilized as a decision support system for marine ecological management. Applications include fisheries, marine biology, physical and biological oceanography, and marine spatial management. The GIS provides a home for diverse data types and automated tools for downloading remote sensed and global circulation model data. Within the GIS environment, PHAM provides a framework for seamless interactive four‐dimensional visualization, for matching between disparate data types, for flexible statistic or mechanistic model development, and for dynamic application of user developed models for habitat, density, and probability predictions. Here we describe PHAM in the context of ecosystem‐based fisheries management, and present results from case study projects which guided development. In the first, an analysis of the purse seine fishery for tropical tuna in the eastern Pacific Ocean revealed oceanographic drivers of the catch distribution and the influence of climate‐driven circulation patterns on the location of fishing grounds. To support management of the Common Thresher Shark (Alopias vulpinus) in the California Current Ecosystem, a simple empirical habitat utilization model was developed and used to dynamically predict the seasonal range expansion of common thresher shark based on oceanographic conditions.     

Movements and behaviors of swordfish Xiphias gladius in the United States Pacific Leatherback Conservation Area

This study reports on the movements of swordfish tagged within the Pacific Leatherback Conservation Area (PLCA), an expansive region (>500,000 km²) off the U.S. West Coast that has been seasonally restricted to drift‐gillnet fishing since 2001 to reduce leatherback sea turtle (Dermochelys coricea) interactions. Thirteen swordfish were outfitted with satellite‐linked archival tags scheduled for short (2–20 days, n = 11) and longer‐term (150 days, n = 2) data collection. All tags were deployed on basking swordfish using traditional harpoon‐based methods during the fall of 2012–2013, near offshore seamounts (35.6°N/122.9°W to 37.4°N/123.5°W). Depth and temperature data from 11 swordfish (~90 to 150 kg) resulted in <251 days of movement information from the PLCA region. All tagged individuals exhibited surface‐oriented nocturnal movements, spending >99% of the night above the average thermocline depth (37.5 m), with an average night depth of 8.3 ± 1.6 m. Daytime depth distribution was greater and more variable (mean 107.1 ± 21.2 m), with fish primarily displaying three behavioral patterns: (i) basking activity, 16.7% of the day, (ii) a mixed‐layer distribution between 3 m and the thermocline (26.8% of the day), and (iii) prolonged dives below the thermocline, 56.5% of the day. For seven of the tracks, daytime basking rates increased when thermocline depth was <37 m. As fish moved offshore, there was less variability in vertical movements with a reduction in both basking activity and mixed layer occupancy, as well as an increase in average daytime depth. These data are discussed with respect to the potential development of alternative fishery options for the PLCA.     

Rapid impact of Impatiens glandulifera control on above‐ and belowground invertebrate communities

The annual plant Impatiens glandulifera (Himalayan balsam) is the most widespread invasive non‐native weed in the British Isles. Manual control is widely used, but is costly and laborious. Recently, biological control using the rust fungus Puccinia komarovii var. glanduliferae has been trialled. We designed an experiment to assess the impact of these control methods on invertebrate communities in relation to unmanaged and uninvaded habitats, and to determine whether mycorrhizal inoculation aided post‐control recovery of these communities. Sixty invaded and twenty uninvaded field soil blocks were transplanted to the experiment site, where a mycorrhizal inoculum was added to half of all blocks. Biological and mechanical control treatments were applied to twenty invaded blocks independently; the twenty remaining invaded blocks were left intact. Above‐ and belowground invertebrate samples were collected from the blocks at the end of the growing season. Overall, aboveground invertebrate abundance increased with the removal of I. glandulifera, and several groups showed signs of recovery within one growing season. The effect of mechanical control was more variable in belowground invertebrates. Biological control did not affect aboveground invertebrate abundance but resulted in large increases in populations of belowground Collembola. Our experiment demonstrates that mechanical removal of I. glandulifera can cause rapid increases in invertebrate abundance and that its biological control with P. komarovii var. glanduliferae also has the potential to benefit native invertebrate communities.     

Stomatal response of an anisohydric grapevine cultivar to evaporative demand, available soil moisture and abscisic acid

Stomatal responsiveness to evaporative demand (air vapour pressure deficit (VPD)) ranges widely between species and cultivars, and mechanisms for stomatal control in response to VPD remain obscure. The interaction of irrigation and soil moisture with VPD on stomatal conductance is particularly difficult to predict, but nevertheless is critical to instantaneous transpiration and vulnerability to desiccation. Stomatal sensitivity to VPD and soil moisture was investigated in Semillon, an anisohydric Vitis vinifera L. variety whose leaf water potential (Ψ(l)) is frequently lower than that of other grapevine varieties grown under similar conditions in the warm grape-growing regions of Australia. A survey of Semillon vines across seven vineyards revealed that, regardless of irrigation treatment, midday Ψ(l) was dependent on not only soil moisture but VPD at the time of measurement. Predawn Ψ(l) was more closely correlated to not only soil moisture in dry vineyards but to night-time VPD in drip-irrigated vineyards, with incomplete rehydration during high night-time VPD. Daytime stomatal conductance was low only under severe plant water deficits, induced by extremes in dry soil. Stomatal response to VPD was inconsistent across irrigation regime; however, in an unirrigated vineyard, stomatal sensitivity to VPD-the magnitude of stomatal response to VPD-was heightened under dry soils. It was also found that stomatal sensitivity was proportional to the magnitude of stomatal conductance at a reference VPD of 1kPa. Exogenous abscisic acid (ABA) applied to roots of Semillon vines growing in a hydroponic system induced stomatal closure and, in field vines, petiole xylem sap ABA concentrations rose throughout the morning and were higher in vines with low Ψ(l). These data indicate that despite high stomatal conductance of this anisohydric variety when grown in medium to high soil moisture, increased concentrations of ABA as a result of very limited soil moisture may augment stomatal responsiveness to low VPD.     

Hunting behavior of a marine mammal beneath the antarctic fast Ice

The hunting behavior of a marine mammal was studied beneath the Antarctic fast ice with an animal-borne video system and data recorder. Weddell seals stalked large Antarctic cod and the smaller subice fish Pagothenia borchgrevinki, often with the under-ice surface for backlighting, which implies that vision is important for hunting. They approached to within centimeters of cod without startling the fish. Seals flushed P. borchgrevinki by blowing air into subice crevices or pursued them into the platelet ice. These observations highlight the broad range of insights that are possible with simultaneous recordings of video, audio, three-dimensional dive paths, and locomotor effort.     

Analysis and Occurrence of Endocrine Disruptors in Brazilian Water by HPLC-Fluorescence Detection

A method for simultaneous analysis of bisphenol A (BPA) and 17α-ethinylestradiol (EE2) in water supply was developed using solid-phase extraction and high-performance liquid chromatography with fluorescence detection. The linearity was evaluated between 2.5 and 200 μg L^?1 (r> for the analytes. The limits of quantification were 1.5 and 2.1 ng L^?1 for BPA and EE2, respectively. The extraction was made with C18 cartridges, and recoveries obtained varied between 70 and 102 % for the strengthening of 5 μg L^?1. After the validation, the method was applied in the determination of pollutants in surface water and water supply of Sao Luis, Brazil, where BPA was found in two of the eight samples analyzed, with concentrations of 1.11 and 3.61 μg L^?1.     

Factors influencing farmers' responses to welfare legislation: A case study of gestation sow housing in Flanders (Belgium)

In the light of the EU ban on individual confinement of gestating sows which will have to be fully implemented by 2013, a survey was conducted among a representative sample of Flemish pig producers. The questionnaire was sent by post to 250 farmers in 2003 and 352 farmers in 2005 of which 219 and 296, respectively, provided valid responses via telephone. The percentage of respondents housing (some of) their sows in group was 10.5% in 2003 and 16.2% in 2005. These farmers were more likely to have a successor than farmers housing their sows individually. The most common group housing systems were free access stalls (24%) followed by electronic feeding stations (21%), ad libitum feeding (20%), feeding stalls/troughs (18%), and drop/trickle feeding systems (13%). Interval (4%) and electronic feed dispensers (0%) were very rare in Flanders. The main criteria for having chosen a particular group housing system related to sow health and welfare, investment costs and amount of labour. The relative importance of economic reasons has increased over time. Users were generally rather satisfied with their group housing system. Farmers using group housing for all their sows were more satisfied than farmers using both group and individual housing. Users of ad libitum feeding systems (and feeding stalls/troughs) were more satisfied than users of electronic feeding stations. A minority of respondents was planning to change to group housing within two years time (4.1% in 2003 and 7.4% in 2005). These tended to be young farmers with a large sow herd and 58% reported to opt for free access stalls. The main reason why the remaining respondents were not planning to change to group housing yet is that they will stop farming activities before 2013. This reason was particularly important for older small-scale farmers without a successor. In contrast, the lack of financial resources and security was particularly important for young farmers of a large sow herd with a likely successor. An increasing group of farmers (often without a successor) reported to delay changing to group housing because they consider individual housing more profitable. These results show that, in Flanders, the conversion to group housing is taking place slowly, that the reasons for not converting yet vary according to the farmers' age, the likelihood of a successor and herd size, and that there are differences between operational group housing systems concerning herd size, age of the system, sow management and user satisfaction.