Inbreeding depression for economically important traits of Mazandaran native fowls

1. The objective was to investigate inbreeding depression for some economic traits of Mazandaran native fowls using data collected from 1992 to 2012 (21 generations) using a REML animal model of significant fixed and random effects with inbreeding of birds and dams as covariates.

2. The mean inbreeding coefficient (F) for the whole population and dams was 4.67% and 4.12%, respectively, and most of the inbred birds (75.79%) and inbred dams (72.58%) had F < 12.5%.

3. Individual and dam inbreeding trends were 0.55% and 0.53% per year.

4. Inbreeding depression for body weight at hatch, at 8 weeks and 12 weeks of age, age at sexual maturity, weight at sexual maturity, egg weight at 1st d of laying and average egg weight at 28, 30 and 32 weeks of laying due to a 1% increase in individual inbreeding were ?0.11 g, ?3.1 g, ?1.3 g, 0.15 d, 0.59 g, ?0.05 g and ?0.03 g, respectively.

5. A 1% increase in maternal inbreeding resulted in a reduction of 0.06, 0.6 and 3.6 g in body weight at hatch, 8 weeks and 12 weeks of age.

     

Factors affecting the reproductive efficiency in crayfish: implications for aquaculture

In recent years, crayfish aquaculture industry has been developing rapidly in different regions of the world. Crayfish aquaculture is often carried out in dams, lakes and extensive pond systems. There is an increasing demand for crayfish juvenile in aquaculture sector. Therefore, it is important to know which factors affect reproductive efficiency in crayfish. In the present review, factors affecting the reproductive efficiency of crayfish are divided into two main sections, external and internal factors. Dietary lipids, phospholipids, highly unsaturated fatty acids, protein and amino acids, vitamins and carotenoids are important external factors affecting broodstock crayfish reproduction. In addition, various external (i.e. female size, stocking density, temperature, photoperiod, sex ratio) and internal (i.e. endogenous hormones) factors affect the reproductive efficiency in crayfish. This study reviews the present knowledge with the purpose of realizing the factors that are important to reach optimal crayfish nutrition, maturation and reproduction (i.e. pleopodal egg number and quality). This review will particularly be useful for crayfish farmers and crayfish hatchery units.     

Effects of 17β-estradiol injection on the reproductive efficiency of freshwater crayfish,Astacus leptodactylus (Eschscholtz, 1823)

The effects of 17β-estradiol injection (10^?7mol/crayfish) in adult female Astacus leptodactylus on the reproductive efficiency (i.e., pleopodal egg and stage 1 juvenile numbers) were investigated. In addition, hepatosomatic index, gonodosomatic index, and 17β-estradiol (E2) levels of crayfish ovary, hepatopancreas, and heamolymph before and after injections were also determined. Results showed that E2 injection to females enhances the reproductive efficiency of A.leptodctylus. E2 injection significantly increased pleopodal egg and stage 1 juvenile numbers, GSI, HSI, and concentrations of E2 in heamolymph, ovary, and hepatopancreas. However, E2 injection did not accelerate time of mating and proportion of pleopodal egg-berried females at the first week of reproduction season in this species. This study highlights that to improve the reproductive efficiency of A.leptodctylus by using hormones to regulate the ovarian cycle, E2 should be used at least 1.5 months before the commencement of the breeding season.     

Prevalence of subclinical ketosis in dairy cattle in the Southwestern Iran and detection of cutoff point for NEFA and glucose concentrations for diagnosis of subclinical ketosis

Subclinical ketosis (SCK) is simply a condition marked by increased levels of circulating ketone bodies without the presence of the clinical signs of ketosis. Subclinical ketosis can cause economic losses through decreased milk production and association with preparturient diseases. Limited information is available regarding the prevalence of SCK in dairy herds in Southwestern Iran. The objectives of this study were (i) determination of the cutoff point of nonesterified fatty acids (NEFAs) and glucose concentrations for diagnosis of SCK using receiver operating characteristic (ROC) analysis, and (ii) determination of prevalence of subclinical ketosis in apparently healthy dairy cattle in Southwestern Iran. From October to December 2009, a total of 100 clinically healthy multiparous Holstein cows (3-8 years old) were randomly selected from 16 dairy herds around Kazerun, Fars Province, Iran. The cows had two-six lactations, with body weight ranging from 500 to 650 kg. Blood samples for each cow were taken at 2, 4 and 6 weeks post parturition and 3-4h after the morning feeding. The optimal cutoff point was set, by the ROC method, to >0.26 mmol/L for NEFA, and < 2.26 mmol/L for glucose with corresponding 82.54% sensitivity and 91.89% specificity for NEFA and 44.44% sensitivity and 78.38% specificity for glucose. Cows with BHB concentrations higher than 1200 μmol/L were classified as having SCK. In 2, 4 and 6 weeks post parturition 63%, 68% and 59% of the tested cows were subclinically ketotic. Overall, 97% of tested cows (97/100) were considered subclinically ketotic in at least one sample period. Thirty percent of tested cows (30/100) suffered from subclinical ketosis in all of the 2, 4 and 6 weeks postpartum. The results suggest that, a cut-off point of 0.26 mmol/L for NEFA concentrations can be used during early lactation for diagnosis of subclinical ketosis and making management decisions for prevention and treatment. Glucose cannot be a good criterion for diagnosis of SCK and it does not appear to be useful for monitoring subclinical ketosis.     

Application of near infrared spectroscopy for authentication of <Emphasis Type="Italic">Picea abies</Emphasis> seed provenance

Authentication of seed provenance is an importance issue to avoid the negative impact of poor adaptation of progenies when planted outside their natural environmental conditions. The objective of this study was to evaluate the potential of near infrared (NIR) spectroscopy as rapid and non-destructive method for authentication of Picea abies L. Karst seed provenances. For this purpose, five seed lots from Sweden, Finland, Poland and Lithuania each were used. NIR reflectance spectra were recorded on individual seeds (n = 150 seeds × 5 seed lots × 4 provenances = 3000 seeds) using XDS Rapid Content Analyzer from 780 to 2500 nm with a resolution of 0.5 nm. Classification model was developed by orthogonal projection to latent structures-discriminant analysis. The performance of the computed classification model was validated using two test sets—internal (the same seed lots as the model but excluded during model development; n = 600 seeds) and external (seed lots not included in the model; n = 1158 seeds). For the internal test, the model correctly recognized 99% of Swedish, Finnish and Polish samples and 97% of Lithuanian seeds. For the external test samples, the model correctly assigned 81% of Swedish, 96% of Finnish, 98% of Lithuanian and 93% of Polish seeds to their respective classes. The mean classification accuracy was 99 and 95% for internal and external test set, respectively. The spectral differences among seed lots were attributed to differences in chemical composition of seeds, presumably fatty acids and proteins, which are the dominant storage reserves in P. abies seeds. In conclusion, the results demonstrate that NIR spectroscopy is a very promising method for monitoring putative seed provenances and in seed certification.     

Detection of QTL for greasy fleece weight in sheep using a 50 K single nucleotide polymorphism chip

Genome-wide association studies (GWAS) have introduced an influential tool in the search for quantitative trait loci (QTL) influencing economically important traits in sheep. To identify QTL associated with greasy fleece weight, a GWAS with 50 K single nucleotide polymorphisms (SNPs) was performed in a Baluchi sheep population. Association with greasy fleece weights was tested using the software Plink. The results of our GWAS provided three novel SNP markers and candidate genes associated with greasy fleece weight. A total of three chromosome-wide significant associations were detected for SNP on chromosomes 17 and 20 affecting greasy fleece weight across the four shearing. One of the significant SNP markers was located within ovine known genes namely FAM101A. Further investigation of these identified regions in validation studies will facilitate the identification of strong candidate genes for wool production in sheep.     

Association of allelic polymorphisms of IGFALS gene with growth traits in Makouei and Ghezel sheep breeds

Insulin-like growth factor-binding protein acid-labile subunit (IGFALS) encodes a protein which binds to IGF1 and IGFBP-3 to regulate the growth, differentiation, and other physiological processes. The aim of this study was the identification of allelic polymorphisms of the IGFALS gene using the PCR-RFLP technique and evaluation of their association with growth traits. For this end, 120 blood samples were randomly collected from each breed. Following amplification of an 1113-bp fragment of exon 1 and a part of intron 1 of the IGFLAS gene, genotyping was conducted by three restriction enzymes including HinfI, MscI, and PvuII. The results showed that only one allele was observed in IGFALS-PvuII site, while in IGFLAS-MscI site, three AA, AB, and BB genotypes with the frequencies of 17.5%, 32%, and 50.5% and 11%, 37.5%, and 51.5% were observed in Makouei and Ghezel sheep breeds, respectively. Additionally, in the IGFLAS-HinfI site, two AB and BB genotypes with the frequency of 34.2% and 65.8% were observed in Makouei sheep and AA, AB, and BB genotypes with the frequency of 9%, 21%, and 70% were observed in Ghezel sheep. So that, Makouei sheep with AB genotype had more chest girth (CG) compared with other genotypes. Furthermore, a significant association was observed between the genotypes of IGFLAS-HinfI with birth weight (BW) in Ghezel and BW, weaning weight (BW3), and CG in Makouei sheep. Haplotype analysis revealed an association between paternal haplotypes and BW in both Ghezel and Makouei breeds. So that, AAB and ABB haplotypes showed more BW than others in Makouei and Ghezel sheep, respectively.

     

Growth characteristics and reproductive output of dwarf mistletoe-infected Juniperus polycarpos in Iran

Dwarf mistletoes are parasitic flowering plants that infect conifers, resulting in substantial loss of growth and mortality. Recently, forest managers in Iran are contemplating whether infection of Juniperus polycarpos C. Koch forests by dwarf mistletoe, Arceuthobium oxycedri （DC.） M. Bieb, influences tree vigor and contributes to insuffieient natural regeneration. The present study aimed at assessing the severity of infection and its impact on growth and reproductive output of./., polycar- pos. Infected and uninfected trees （n =20 each） were selected for assess- ment of diameter, height, crown area, and crown volume as well as quantity and quality of cones and seeds. The severity of infection of trees was determined by Hawksworth＇s 6-class dwarf mistletoe rating （DMR） system. The DMR system revealed that 40% of the infected sample trees were lightly infected （DMR =1-2） and 60% were moderately infected （DMR =3--4）. Growth characteristics did not differ significantly （p 〉 0.05） between infected and uninfected trees. However, moderate infec- tion affected the reproductive output of./. polycarpos by significantly （p 〈0.05） reducing the mean number of cones per unit area of the crown, increasing the number of damaged seeds, and reducing seed size and seedgermination capacity. We conclude that reproductive output of J.. poly- carpos is more sensitive than growth characters to moderate infection by juniper dwarf mistletoe, and this might partly account for poor natural regeneration.