Using knowledge of behaviour and optic physiology to improve fish passage through culverts

Culverts reduce connectivity for aquatic animals by being both a hydraulic and physical barrier. However, altered light intensity may also be a behavioural barrier to fish movement, especially for diurnal species that have adapted to moving when it is light. We propose that knowledge of optical physiology and fish behaviour, two important mechanisms underpinning movement, can inform efforts to improve fish movement through culverts. We firstly review the sensory systems of fish with reference to visual sense and explore how this affects fish movement. We then highlight theoretical knowledge that can help us understand fish behaviour and the potential mismatch between the conditions under which fish have evolved and altered conditions within culverts. We describe potential knowledge gaps and directions for future research to improve our understanding of how culverts may affect fish movement. Finally, we explore the potential costs and ecological benefits of different mitigation options to identify those with the most promise for managing the light environment in culverts to facilitate movement. For researchers and managers exploring this subject, we suggest an approach that: (a) identifies light requirements for movement by different species, (b) tests movement under different light conditions and (c) considers an integrative assessment method for testing fish behaviour around culverts. Understanding how optical physiology, fish behaviour and culvert design influence fish movement can improve connectivity for a range of species.     

Effects of acute environmental and handling exposure on physiology and fillet quality of market‐sized Channel Catfish

Catfish Ictalurus spp. are subjected to stressful conditions during harvest, which may be linked to fillet coloration and quality. Poor water quality in ponds, socks or hauling tanks, as well as handling stress, have been suggested to cause red fillets in catfish; however, chronic exposure has not resulted in red fillets. Short‐term occurrences of extreme poor water quality, particularly low dissolved oxygen, high carbon dioxide and high temperature, may occur in ponds or during harvest. Therefore, market‐sized Channel Catfish Ictalurus punctatus were acutely exposed (12 hr) to one of the three water quality treatments while confined during a simulated socking procedure and evaluated for stress responses by means of change in blood parameters and fillet quality. In fish subjected to the extreme treatment, hematocrit, plasma cortisol, glucose and lactate levels increased, with 22% mortality, indicating highly stressful conditions. In fish subjected to moderate and typical (control) treatments, cortisol increased but a lack of change or decrease in glucose and lactate indicated minimal anaerobic metabolism. Only one red fillet was produced by the extreme treatment and two by the typical treatment; therefore, the results suggest red fillets are not a product of poor water quality compounded by handling during harvest.     

Projecting the suitability of global and local habitats for myrtle rust (Austropuccinia psidii) using model consensus

Myrtle rust (caused by Austropuccinia psidii) affects more than 500 known host species in the Myrtaceae family. Three different modelling approaches (CLIMEX, MaxEnt and Multi-Model Framework) were used to project the habitat suitability for myrtle rust at both global and local scales. Current data on the global occurrence of myrtle rust were collected from online literature and expert solicitation. Long-term averages of climate data (1960–1990) were sourced from WorldClim and CliMond websites. Recent reports of myrtle rust in New Zealand were used for validation of model outputs but not in model training and testing. The model outputs were combined into a consensus model to identify localities projected to be suitable for myrtle rust according to two or three models (hotspots). In addition to the locations where the pathogen is currently present, all models successfully projected independent occurrence data in New Zealand suitable for establishment of the pathogen. Climate suitability for the pathogen was primarily related to temperature followed by rainfall in MaxEnt and the CLIMEX model. The results confirmed the optimum temperature range of this pathogen in the literature (15–25 °C). Additional analysis of the precipitation variables indicated that excessive rain (more than 2000 mm in warmest quarter of the year) combined with high temperatures (>30 °C) constrain pathogen establishment. The results of the current study can be useful for countries such as New Zealand, China, South Africa and Singapore where the pathogen has not fully spread or established.     

COMPUTED TOMOGRAPHIC FINDINGS IN 57 CATS WITH PRIMARY PULMONARY NEOPLASIA

Primary pulmonary neoplasia is relatively uncommon in cats and generally has a poor prognosis. In this multicenter, retrospective study of 57 cats with pulmonary neoplasia, the most frequent presenting signs were anorexia/inappetence (39%) and cough (37%). The pulmonary tumors were considered to be incidental findings in 9% cats. In computed tomographic (CT) images, primary pulmonary tumors appeared as a pulmonary mass in 55 (96%) cats and as a disseminated pulmonary lesion without a defined mass in two (4%) cats. Most pulmonary tumors were in the caudal lobes, with 28 (49%) in the right caudal lobe and 17 (30%) in the left caudal lobe. CT features associated with pulmonary tumors included mass in contact with visceral pleura (96%), irregular margins (83%), well‐defined borders (79%), bronchial compression (74%), gas‐containing cavities (63%), foci of mineral attenuation (56%), and bronchial invasion (19%). The mean (range) maximal dimension of the pulmonary masses was 3.5 cm (1.1–11.5 cm). Additional foci of pulmonary disease compatible with metastasis were observed in 53% cats. Pleural fluid was evident in 30% cats and pulmonary thrombosis in 12% cats. The histologic diagnoses were 47 (82%) adenocarcinomas, six (11%) tumors of bronchial origin, three (5%) adenosquamous cell carcinomas, and one (2%) squamous cell carcinoma. In this series, adenocarcinoma was the predominant tumor type, but shared many features with less common tumor types. No associations were identified between tumor type and CT features. Prevalence of suspected intrapulmonary metastasis was higher than in previous radiographic studies of cats with lung tumors.     

评估调质时间和温度对猪颗粒饲料淀粉糊化度和维生素沉积的影响

本论文研究了饲料加工的两个关键参数(调质温度和时间)对育肥猪颗粒饲料淀粉糊化度和维生素沉积的影响。日粮配方为含30%干酒糟及其可溶物的玉米-豆粕型基础日粮。整个试验中配方保持不变。本试验采用2×3双因子设计,调质温度分别为77℃和88℃,调质时间分别15秒、30秒和60秒。此外,本试验还设置一个对照组,对照组饲料不采用调质制粒工艺,而是采用粉料饲喂。因此,本试验共有7个处理组。采集调质后制粒前(热干粉)、制粒后冷却前(热制粒)、以及制粒冷却后(冷制粒)的样品,并分析这三种样品的总淀粉率、淀粉糊化     

Migration strategies of brown trout (Salmo trutta) in a subarctic river system as revealed by stable isotope analysis

We estimated the proportions of anadromous and freshwater‐resident brown trout (Salmo trutta) in different parts of the subarctic River Näätämöjoki/Neidenelva system (Finland and Norway) using carbon, nitrogen and hydrogen stable isotope analyses of archived scales as identifiers of migration strategy. Our results showed that carbon stable isotope values were the best predictor of migration strategy. Most individuals fell into two clearly distinct groups representing anadromous (47%) or freshwater‐resident (42%) individuals, but some fish had intermediate carbon values suggesting repeated movement between freshwater and the sea. The proportion of anadromous individuals decreased steadily with distance from the sea forming a spatial continuum in migration strategies which is probably maintained by the combination of several factors such as divergent availability of food resources, variable migration costs and genetic differences. These within‐catchment differences in migration strategies should be taken into account in fisheries management practices.     

Changes to freshwater mussel assemblages after 25 years of impoundment and river habitat fragmentation

1. The Tennessee–Tombigbee Waterway is among the largest and most expensive environmental engineering projects of the 20^th century. The waterway accommodates barge navigation between the Tennessee River Drainage and Mobile River Basin through a series of locks, dams, canals, and dredged and diverted streams. These structures have altered riverine habitat and fragmented lotic habitats resulting in isolated freshwater mussel populations in patches of streams such as the East Fork Tombigbee River, where 42 species were known historically.
2. The first post‐waterway mussel surveys in 1987 and 1988 reported 31 taxa. During 2010 and 2011 surveys, 70 sites were sampled using both timed searches and quadrats and detected 29 extant mussel species. Between 1988 and 2010–2011 the relative abundance of nine mussel taxa decreased, whereas the abundance of 11 taxa increased. The populations of three federally listed species were detected at levels below the detection limits in 1988 as well as three non‐native unionids that appear to have colonized the East Fork Tombigbee River via the Tennessee–Tombigbee Waterway River.
3. Although mussel abundance and total species richness were relatively unchanged, assemblage composition shifted toward animals typical of smaller streams rather than large rivers. This shift suggests that present‐day East Fork Tombigbee River habitats favour smaller‐bodied, thinner shelled taxa that are laterally compressed and lack shell sculpture. These taxa are likely to be better adapted to hydrologically and hydraulically variable habitats than are thick‐shelled, large bodied, and sculptured mussels.
4. The results suggest that mussel assemblages are dynamic and may exhibit predictable responses to changes in hydrology, physical habitat conditions, and stream connectivity. However, examinations over broad (20+ yr) temporal scales are needed to observe these shifts. The data demonstrate the value of regular monitoring of diverse mussel assemblages and the importance of stream connectivity and flow modifications to this long‐lived group of benthic invertebrates.