A domain-specific language framework for farm management information systems in precision agriculture

Precision Agriculture - Farm management information system (FMIS) is an important element of precision agriculture to support the decision making process in the agricultural business. Developing...     

Dietary trans‐cinnamic acid application for rainbow trout (Oncorhynchus mykiss): II. Effect on antioxidant status,digestive enzyme,blood biochemistry and liver antioxidant gene expression responses

The present study investigated the effects of dietary trans‐cinnamic acid (TrCin) on growth performance, biochemical composition, fatty acid composition, blood biochemistry, antioxidant status, digestive enzyme and liver antioxidant gene (EF1α, SOD1, SOD2, CAT, GPX1, GPX4, GR and GST) expression responses of rainbow trout, Oncorhynchus mykiss. Five experimental groups of fish with mean weights of 17.49 ± 0.08 g were used in the study; four of them were fed with TrCin‐supplemented diets (0.25 g/kg TrCin25, 0.50 g/kg TrCin50, 0.75 g/kg TrCin75 and 1.50 g/kg TrCin150), whereas an additive‐free basal diet served as the control (Cntr). At the end of the 60‐day feeding trial, the growth performance, biochemical composition and fatty acid composition were similar for all experimental groups. A decrease was observed in intestinal and stomach pH, serum triglyceride and AST, ALT, LDH and ALP levels in fish fed with especially 0.50 g/kg TrCin‐supplemented diet. Moreover, dietary TrCin especially at 0.50 g/kg incorporation level significantly increased the serum SOD and liver SOD2, CAT, GST, GPX1, GPX4 and GR gene expression responses. As a conclusion, feeding rainbow trout for a period of 60 days with a diet containing 0.50 g/kg TrCin might be sufficiently enough to improve the levels of antioxidant enzymes and health status in fish.     

Development of flexible antimicrobial packaging materials against Campylobacter jejuni by incorporation of gallic acid into zein-based films

In this study, antimicrobial films were developed against Campylobacter jejuni by incorporation of gallic acid (GA) into zein-based films. The zein and zein-wax composite films containing GA between 2.5 and 10 mg/cm(2) were effective on different C. jejuni strains in a concentration-dependent manner. Zein and zein-wax composite films showed different release profiles in distilled water but quite similar release profiles at solid agar medium. Depending on incorporated GA concentration, 60-80% of GA released from the films, while the remaining GA was bound or trapped by film matrix. The GA at 2.5 and 5 mg/cm(2) caused a considerable increase in elongation (57-280%) of all zein films and eliminated their classical flexibility problems. The zein-wax composite films were less flexible than zein films, but the films showed similar tensile strengths and Young's modulus. Scanning electron microscopy indicated different morphologies of zein and zein-wax composite films. This study clearly showed the good potential of zein and GA to develop flexible antimicrobial films against C. jejuni.     

Biophysical and microbiological study of high hydrostatic pressure inactivation of Bovine Viral Diarrheavirus type 1 on serum

The effect of high hydrostatic pressure application on fetal bovine serum components and the model microorganism (Bovine Viral Diarrheavirus type 1 NADL strain) was studied at 132 and 220 MPa pressure for 5 min at 25°C. Protein secondary structures were found to be unaffected by an artificial neural network application on the amide I region for both untreated and HHP treated samples. FTIR spectroscopy study of both the HHP-treated and control samples revealed changes in the intensity of some bands in the finger-print region (1500-900 cm(-1)) originating mainly from lipids which are thought to result from changes in the lipoprotein structure. The virus strain lost its infectivity completely after 220 MPa HHP treatments. These results indicate that HHP can be successfully used for inactivation of pestiviruses while leaving structural and functional properties of serum and serum products unaffected.     

Update on ovine footrot in New Zealand: isolation, identification, and characterization of Dichelobacter nodosus strains [corrected

Dichelobacter nodosus, a Gram-negative strict anaerobe, is the essential causative agent of ovine footrot. Despite its worldwide presence, the disease has significant economic impact in those sheep-farming countries with a temperate climate and moderate to high rainfall, such as New Zealand (NZ) and Australia. In this study, we aimed to isolate, identify, and characterize as many D. nodosus strains as possible from NZ farms by using polymerase chain reaction (PCR)-based technology. Understanding the virulence of this bacterium and showing extensive genomic variation in the fimbrial subunit gene (fimA) in different D. nodosus strains was very important to produce serogroup specific and effective vaccine for NZ. More than 100 footrot samples were collected from four different farming regions in NZ. Thousands of primary plates were cultured anaerobically and examined with Gram-staining in order to detect single colonies of D. nodosus. Approximately 500 plates that had potential D. nodosus colonies were subcultured several times to eliminate contaminating colonies until single colonies were obtained. Variable and a part of the conserved regions of the fimbrial subunit gene (fimA) were amplified directly from bacterial DNA extracted from footrot lesions and also from cultured NZ D. nodosus isolates, using the polymerase chain reaction. Different fimA amplimers were analyzed by DNA sequencing. On the basis of DNA sequence analysis, 16 new D. nodosus isolates belonging to eight different serogroups were identified from NZ. These new D. nodosus fimA sequences from NZ were different to previously reported strains and strains used in a commercial vaccine.     

Glycosylation of type-IV fimbriae of Dichelobacter nodosus

Dichelobacter nodosus is the causative agent of ovine footrot and the type-IV fimbriae on this bacterium are essential for maintaining its virulence. In this study, we reveal that these fimbriae are glycosylated. This was demonstrated in several ways: by the detection of carbohydrate on fimbrial protein using periodic acid Schiff reagent (PAS) staining of SDS-PAGE gels and by demonstrating enzymatic deglycosylation and by analysis of the amino acid sequences derived from the fimA gene, whereby the gene from isolates of D. nodosus that appeared to be glycosylated had potential glycosylation sites both inside and outside of the variable region of fimA. The results would also explain the observation that the calculated molecular weight of fimA from some D. nodosus serotypes does not correlate with the apparent size determined from electrophoretic mobility.