Spatial variability of organic matter degradability in tidal Elbe sediments

Purpose

The microbial turnover of sediment organic matter (OM) in ports and waterways impacts water quality, sonic depth finding and presumably also rheological properties as well as greenhouse gas emissions, especially if organic carbon is released as methane. As a consequence, sediment management practices as a whole are affected. This study aimed to discern spatial OM degradability patterns in the Port of Hamburg and investigated correlations with standard analytical properties as a basis for future predictive modelling.

Materials and methods

Sediments in the Port of Hamburg were repeatedly sampled at nine locations along an east-west transect using a 1-m corer. In a stratified sampling approach, layers of suspended particulate matter (SPM), fluid mud (FM), pre-consolidated sediment (PS) and consolidated sediment (CS) were identified and individually analysed for long-term aerobic and anaerobic degradation of organic matter, DNA concentration, stable carbon isotope signature, density fractions and standard solids and pore water properties.

Results and discussion

The investigation area was characterised by a distinct gradient with a 10-fold higher OM degradability in upstream areas and lower degradability in downstream areas. Concomitantly, upstream locations showed higher DNA concentrations and more negative δ¹³C values. The share of bulk sediment in the heavy density fraction as well as the proportion and absolute amount of organic carbon were significantly larger at downstream locations. A depth and hence age-related gradient was found at individual locations, showing higher degradability of the upper, younger material, concomitant with higher DNA concentration, and lower OM turnover in the deeper, older and more consolidated material. Deeper layers were also characterised by higher concentrations of pore water ammonium, indicative of anaerobic nitrogen mineralisation.

Conclusions

Organic matter lability is inversely linked to its stabilisation in organo-mineral complexes. The observed degradability gradient is likely due to the different OM quality in relation to its origin. Downstream OM enters the system with the tidal flood current from the direction of the North Sea whereas upstream locations receive OM originating from the catchment, containing more autochthonous, plankton-derived and more easily degradable components. At individual sampling points, depth-related degradability gradients reflect an age gradient, with easily degradable material in top layers and increasing stabilisation of OM in organo-mineral compounds with depth.

     

Questionnaire study and postmortem findings in backyard chicken flocks in Finland

Background

Although modern commercial poultry production today is based on large farms and intensive husbandry, keeping backyard poultry has regained popularity in industrialized countries. However, the health status of backyard flocks is still relatively poorly documented. A questionnaire was sent to the owners of 376 backyard poultry flocks (<500 birds) in order to study health management procedures and characterize backyard poultry populations in Finland. Information was also collected on the postmortem findings from non-commercial flocks using necropsy data from the Finnish Food Safety Authority (Evira).

Results

Backyard flocks in Finland are small in size (<50 birds), comprising mainly chickens. Based on the results of the questionnaire, the health of such flocks is good, mortality low and vaccinations are not commonly used. Most of the flocks were registered in the national poultry register. The standard biosecurity practices are not generally applied and contact with wild birds, pets and farm animals is frequent, which can make the flocks more prone to infectious diseases. We conducted an 11-year retrospective study of the postmortem necropsy findings of the Evira in order to document the diseases, which caused mortality in backyard chickens in Finland. Necropsy was performed on a total of 132 non-commercial laying hens during 2000 – 2011. The most common postmortem findings were Marek’s disease (27%) and colibacillosis (17%).

Conclusions

This study is the first to report data on characteristics of and management practices for backyard chicken flocks in Finland. Close connections with commercial flocks are rare and farms are usually distantly located suggesting that the risk that these backyard flocks pose to commercial poultry is low.     

Migration strategies of brown trout (Salmo trutta) in a subarctic river system as revealed by stable isotope analysis

We estimated the proportions of anadromous and freshwater‐resident brown trout (Salmo trutta) in different parts of the subarctic River Näätämöjoki/Neidenelva system (Finland and Norway) using carbon, nitrogen and hydrogen stable isotope analyses of archived scales as identifiers of migration strategy. Our results showed that carbon stable isotope values were the best predictor of migration strategy. Most individuals fell into two clearly distinct groups representing anadromous (47%) or freshwater‐resident (42%) individuals, but some fish had intermediate carbon values suggesting repeated movement between freshwater and the sea. The proportion of anadromous individuals decreased steadily with distance from the sea forming a spatial continuum in migration strategies which is probably maintained by the combination of several factors such as divergent availability of food resources, variable migration costs and genetic differences. These within‐catchment differences in migration strategies should be taken into account in fisheries management practices.     

Predicting regeneration establishment in Norway spruce plantations using a multivariate multilevel model

This study predicts the regeneration establishment on 3-year-old Norway spruce (Picea abies (L.) Karst.) plantations in southern Finland using regeneration survey data. Regeneration establishment was described by seven response variables: number of planted spruces, natural Scots pines (Pinus sylvestris L.), natural spruces, natural seed-origin birches (Betula pubescens Ehrh. and B. pendula Roth.) and other broadleaves (i.e. sprout-origin birches and other broadleaves than birch), as well as height of crop-tree spruce and dominant height of broadleaves. Due to the multivariate (several responses for each plot) and multilevel (plot, stand, municipality, forest centre) structure, regeneration establishment was modelled by fitting a multivariate multilevel model with explanatory variables such as temperature sum, site fertility, soil quality and method of site preparation. In the model, the numbers of tree seedlings were modelled using over-dispersed Poisson distributed equations, and the tree heights were modelled using normally distributed linear equations. The estimated fixed and random parameters of the equations were logical, and there was no serious bias in predicting the regeneration establishment in the independent test data set. This modelling approach can be used to predict the regeneration establishment stochastically by taking into account the large unexplained variation in regeneration models.     

Optimising the management of even-aged Pinus sylvestris L. stands in Galicia, north-western Spain

The study developed management instructions for even-aged Pinus sylvestris stands in Galicia (north-western Spain). Although these stands are highly productive, no silvicultural management schedules have been proposed so far for them on the basis of systematic analyses. This study used data from 2160 optimisation runs to develop the management instructions. Land expectation value was used as the objective function. Different prices of timber assortments were considered and the discounting rate was varied from 0.5 to 5%. The method employed to find the optimal management schedules of stands was the combination of a stand simulator and an optimisation algorithm. The simulator uses an earlier growth and yield model for Pinus sylvestris in Galicia to predict the future development of the stand with a given management schedule while the optimisation algorithm seeks the best management schedule among all the possible alternatives. The results show that optimal rotation lengths vary widely between 42 and 170 years, high discounting rates and good site quality resulting in the shortest rotations. Four thinnings were found to be suitable for all sites and discounting rates. With discounting rates higher than 1% the commercial thinnings should gradually decrease the stand basal area towards the end of the rotation.     

Crystallinity of wood and the size of cellulose crystallites in Norway spruce (<Emphasis Type="Italic">Picea abies</Emphasis>)

X-ray diffraction was used to study variations in the crystallinity of wood and the average thickness and length of the crystallites of cellulose as a function of the number of the year ring in Norway spruce [Picea abies (L.) Karst.]. The crystallinity increased from ring 4 to ring 10 from the pith and was constant after ring 10. The crystallinity of mature wood was about 30% ± 5%. The average thickness and average length of the crystallites were 3.2 ± 0.1nm and 28 ± 2nm, respectively; and no systematic variation of these values with the number of the year ring was observed. The mean microfibril angle decreased near the pith but was constant in the mature wood.     

Biodiversity policies in commercial boreal forests: Optimal design of subsidy and tax combinations

This paper examines the first-best instruments for biodiversity maintenance in commercial boreal forests when landowners behave either in Faustmannian or Hartmanian way. Using an extended Hartman model, we show that biodiversity conservation requires both prolonged rotation age and leaving retention trees. While the former promotes some old growth species, the latter create new structural elements of decaying and dead wood, which can sustain a variety of saprolyxic species. A fully synchronized combination of retention tree subsidy and tax instrument is needed both to lengthen the privately optimal rotation period and to provide an incentive to leave retention trees. Using Finnish data we illustrate empirically the sizes of instruments. When combined with a harvest tax, the retention tree subsidy is 1000 and 750 € in the Faustmann and in the Hartman model, respectively. When used with a timber subsidy or a site value tax, the retention tree subsidy is 1700 €/ha in both models. The harvest tax rate varies over the range 40–65% in the Faustmann model and 20–40% in the Hartman model, while timber subsidy is between 0.5–1.0% and site value tax is about 1.75%.     

Predicting stand damage and tree survival in burned forests in Catalonia (North-East Spain)

The study developed models for predicting the post-fire tree survival in Catalonia. The models are appropriate for forest planning purposes. Two types of models were developed: a stand-level model to predict the degree of damage caused by a forest fire, and tree-level models to predict the probability of a tree to survive a forest fire. The models were based on forest inventory and fire data. The inventory data on forest stands were obtained from the second (1989–1990) and third (2000–2001) Spanish national forest inventories, and the fire data consisted of the perimeters of forest fires larger than 20 ha that occurred in Catalonia between the 2nd and 3rd measurement of the inventory plots. The models were based on easily measurable forest characteristics, and they permit the forest manager to predict the effect of stand structure and species composition on the expected damage. According to the stand level fire damage model, the relative damage decreases when the stand basal area or mean tree diameter increases. Conversely, the relative stand damage increases when there is a large variation in tree size, when the stand is located on a steep slope, and when it is dominated by pine. According to the tree level survival models, trees in stands with a high basal area, a large mean tree size and a small variability in tree diameters have a high survival probability. Large trees in dominant positions have the highest probability of surviving a fire. Another result of the study is the exceptionally good post-fire survival ability of Pinus pinea and Quercus suber.     

Carbon inventory methods and carbon mitigation potentials of forests in Europe: a short review of recent progress

The role of European forests and forest management in the carbon balance has received much attention in research recently. This was particularly motivated by the recognition of forest management as one possible measure countries may adopt in the framework of the Kyoto Protocol to reduce the concentration of greenhouse gases in the earth’s atmosphere. The main method to assess carbon budget in forests is based on traditional forest inventories. This method requires the conversion of measured stem volume to carbon pools. This conversion has been identified as a large source of uncertainty in past assessments. Over the last 5 years, intensive research efforts have resulted in significant advances in the reliability of forest inventory based carbon budgets. In parallel, the impact of forest management on the carbon balance of forest ecosystems has been investigated and the carbon mitigation potential of these activities has been analysed. This paper reviews the progress that was made in these two fields of research with a particular focus on European forests.

Application of a molecular sensory science approach to alkalized cocoa (Theobroma cacao): structure determination and sensory activity of nonenzymatically C-glycosylated flavan-3-ols

Application of comparative taste dilution analyses on nonalkalized and alkalized cocoa powder revealed the detection of a velvety, smoothly astringent tasting fraction, which was predominantly present in the alkalized sample. LC-MS/MS analysis, 1D- and 2D-NMR, and CD spectroscopy as well as model alkalization reactions led to the unequivocal identification of the velvety, smoothly astringent molecules as a series of catechin- and epicatechin-C-glycopyranosides. Besides the previously reported (-)-epicatechin-8-C-beta-D-galactopyranoside, additional flavan-3-ol-C-glycosides, namely, (-)-epicatechin-8-C-beta-D-glucopyranoside, (-)-catechin-8-C-beta-D-glucopyranoside, (-)-catechin-6-C-beta-D-glucopyranoside, (-)-epicatechin-6-C-beta-D-glucopyranoside, (-)-catechin-8-C-beta-D-galactopyranoside, (-)-catechin-6-C-beta-D-galactopyranoside, (-)-catechin-6-C,8-C-beta-D-diglucopyranoside, (-)-epicatechin-6-C,8-C-beta-D-digalactopyranoside, (-)-catechin-6-C,8-C-beta-D-digalactopyranoside, and epicatechin-6-C,8-C-beta-D-diglucopyranoside, were identified for the first time in cocoa. Most surprisingly, these phenol glycoconjugates were demonstrated by model experiments to be formed via a novel nonenzymatic C-glycosylation of flavan-3-ols. Using the recently developed half-tongue test, human recognition thresholds for the astringent and mouth-drying oral sensation were determined to be between 1.1 and 99.5 micro mol/L (water) depending on the sugar and the intramolecular binding position as well as the aglycone.