Spermatic and oxidative profile of domestic cat (Felis catus) epididymal sperm subjected to different cooling times (24, 48 and 72 hours)

Cooling stored epididymal samples for several days allows facilities to transport and process genetic material post‐mortem. Improvements to this practice allow the preservation of sperm from domestic cats, which are the ideal study model for wild felids. However, the modifications in spermatic features and the oxidative profile are not fully understood in cats. This information is necessary for the development of biotechniques, such as new extenders for cryopreservation. Therefore, the purpose of this study was to evaluate the spermatic and oxidative profile in samples from the epididymal cauda of domestic cats cooled at 5°C for 24, 48 and 72 hr. Spermatozoa were collected from the epididymis cauda. Evaluations consisted of computer‐assisted sperm analysis (CASA), plasma membrane integrity (eosin/nigrosin), acrosome integrity (fast green/rose bengal), sperm morphology, sperm DNA integrity (toluidine blue), mitochondrial activity (3′3 diaminobenzidine), activity of the antioxidant enzymes glutathione peroxidase (GPx) and superoxide dismutase (SOD), measurement of lipid peroxidation (TBARS) and protein oxidation. A decrease in sperm motility parameters was observed after 72 hr of cooling (i.e. total and progressive) with a higher percentage of minor (37.7 ± 6.3%) and total defects (53.4 ± 6.3%). Additionally, a decrease in high mitochondrial activity (Class I: 16.6 ± 2.2%) occurred after 72 hr. The decrease in motility rates after a long cooling time probably was caused by the increase in sperm abnormalities. A long cooling time causes cold shock and mitochondrial exhaustion, but there was no observed change with the oxidative stress condition. Therefore, cat epididymal sperm stored at 5°C appear to maintain a high quality for up to 48 hr of cooling time.     

Responses of field grown tomato plants to arbuscular mycorrhizal fungal colonization under varying intensities of drought stress

The effects of root colonization by the arbuscular mycorrhizal (AM) fungus Glomus intraradices Schenck and Smith on growth, flower and fruit production, and fruit quality were studied in field-grown tomato plants exposed to varying intensities of drought stress. Inoculated (M+) and non-inoculated (M−) tomato seedlings were exposed to varying intensities of drought stress by adjusting irrigation intervals. Mycorrhizal plants had significantly higher uptake of N and P in both roots and shoots regardless of intensities of drought stress. AM inoculation also significantly increased shoot dry matter and the number of flowers and fruits. The fruit yields of M+ plants under severe, moderate, mild drought-stressed conditions were higher than M− plants by 24.7%, 23.1%, 16.2% and 12.3%, respectively. Furthermore, M+ plants produced tomato fruits that contain significantly higher quantities of ascorbic acid and total soluble solids (TSS) than M− plants. Mycorrhizal effects increased with increasing intensity of drought. The overall results suggest that mycorrhizal colonization affects host plant nutritional status, water stratus and growth under field conditions and thereby alters reproductive behaviour, fruit production and quality of fruits under both well-watered and drought-stressed conditions.     

The role of agroforestry in the farming systems in Rwanda with special reference to the Bugesera-Gisaka-Migongo (BGM) region

The Rwandan farmers, faced with a perpetual land shortage, have evolved certain intensive systems of organic agriculture. These systems, particularly the homestead (compound) farming, involve the combination of food, fodder and tree crops. to a certain extent these systems can satisfy the multiple needs of the subsistence farmers living under several risks and constraints. However, they cannot cope with the expanding food demand of the rapidly increasing population. Some multipurpose, low-input technologies and agroforestry approaches have been designed to improve the productivity of these traditional systems; these include inter/mixed cropping systems and rotations, alley cropping with leguminous trees and shrubs, use of planted fallow, planting tree legumes on anti-erosive lines, mixed farming,community forestry and woodlots, and tree planting on farm/field boundaries. The essential aspects of these technologies are briefly discussed.ISAR-IITA FSR PROJECT, B.P. 629, Kigali RwandaISAR-Swiss Intercooperation, c/o Forestry Department, B.P. 617, Butare, Rwanda     

Zero-water exchange shrimp farming systems (extensive) in the periphery of Chilka lagoon, Orissa, India

The extensive zero-water exchange shrimp farming system in the periphery of Chilka lagoon (Orissa, India) was studied. The study aimed to describe this unique farming system with special reference to dynamics of macrozoobenthos, production characteristics and economics. The study conducted was based on a general survey as well as monitoring of five individual farms over a complete production cycle. The farming practice in this area is characterized by complete absence of water exchange during rearing. Ponds in this area are generally shallow (mean 72 cm). Most of the water and soil quality characteristics of these farms are within acceptable levels. Macrozoobenthos belonging to 12 taxa were collected, amphipods (81%) and polychaetes (13%) being most numerous. Overall macrobenthic density of farms studied varied from 968 to 11,470 individuals/m² with a gross mean of 5644 individuals/m². There was no general pattern to the variation in abundance of various taxa in different phases of the rearing cycle, suggesting a low predatory pressure by shrimp in the farms studied. Shrimp production was highly variable (91–250 kg/ha), but generally low with a mean of 145 kg/ha. The net income of these farms was estimated to be Rs. 63,250 per crop per ha. Compared with shrimp farming system with regular water exchange in the same area, Chilka farms generated high benefit-cost ratio indicating high profitability and sustainability.     

Suppressing Weeds in Direct-seeded Lowland Rice: Effects of Methods and Rates of Seeding

High weed infestation is a major constraint to widespread adoption of direct seeding of rice (Oryza sativa L.) The experiments were conducted in 1998 wet and 1999 dry seasons in the Philippines to examine the effects of seeding methods and rates on suppressing weeds in direct-seeded lowland rice. Treatments consisted of four seeding methods: conventional and modified broadcast seeding, drill seeding with east–west and north–south row orientations; three seeding rates: 40, 80 and 160 kg seed ha⁻¹ as well as two weed control levels: weed control with herbicide and no weed control. Among the seeding methods drill seeding with east–west row orientation had the lowest rice grain yield loss caused by weeds (38 % in the wet and 20 % in the dry season), whereas the highest losses because of weeds were observed with conventional broadcast seeding (59 % in the wet and 27 % in the dry season). Seeding rate was inversely correlated to weed interference. Severe rice yield reduction (71 %) caused by weeds was found at a seeding rate of 40 kg seed ha⁻¹ in the wet season. Using seeding rates of 80 and 160 kg seed ha⁻¹, respectively, lowered yield loss to 47 and 26 % in the wet season, 32 and 18 % in the dry season. Therefore suitable method and/or rate of seeding can significantly suppress weeds in direct-seeded lowland rice.     

Changes in starch,oil, protein and amino acids in developing seeds of okra (Abelmoschus esculentus L. Moench)

The okra seeds of variety Pusa sawani were analysed for protein, non-protein nitrogen, total free amino acids, lysine, and tryptophan from the 7th day to the 42nd day after flowering. Starch, total sugars and oil percent were also estimated in these seeds. During the early stages of maturation, the soluble components (non-protein nitrogen, free amino acids and total sugars) were found in higher quantities than in the later stages. Protein, oil and starch contents increased gradually from day 7 to day 42. The rate of accumulation of oil was found to be at the highest level between 21–28 days after flowering, while the rate of protein deposition was greatest between days 35–42. Inditiation of seed maturation seems to start 21 days after flowering in okra seeds.     

A systematic survey of loss-of-function variants in human protein-coding genes

Genome-sequencing studies indicate that all humans carry many genetic variants predicted to cause loss of function (LoF) of protein-coding genes, suggesting unexpected redundancy in the human genome. Here we apply stringent filters to 2951 putative LoF variants obtained from 185 human genomes to determine their true prevalence and properties. We estimate that human genomes typically contain ~100 genuine LoF variants with ~20 genes completely inactivated. We identify rare and likely deleterious LoF alleles, including 26 known and 21 predicted severe disease-causing variants, as well as common LoF variants in nonessential genes. We describe functional and evolutionary differences between LoF-tolerant and recessive disease genes and a method for using these differences to prioritize candidate genes found in clinical sequencing studies.