筇竹种子发芽条件及筇竹笋矿质元素分析

筇竹为珍稀笋材两用混生竹,具有较高的经济价值。本研究对筇竹种子进行不同温度和光照条件的萌发实验,并培育实生苗发笋后,利用空气-乙炔火焰原子吸收光谱法测定了3个不同出土高度(2 cm,5 cm,8 cm)的筇竹笋中8种矿质元素的含量。实验结果显示,最适宜筇竹种子萌发的条件是20℃,12 h光照/12 h黑暗,但25℃和暗处理更能促进胚根伸长。不同生长时期的筇竹笋钾含量丰富(6521.13~7405.24 mg·kg-1),其次是钠(625.56~814.83 mg·kg-1),铜含量最低(6.86~9.62 mg·kg-1)。筇竹笋的钾、钠含量随高度的增高逐渐下降,而钙、铁、铜、锰含量逐渐升高,锌含量变化呈中峰优势,镁含量基本保持不变。研究为筇竹种子萌发及笋品质提升提供了参考。     

Improvement,identification, and target prediction for miRNAs in the porcine genome by using massive,public high-throughput sequencing data

Despite the broad variety of available microRNA (miRNA) research tools and methods, their application to the identification, annotation, and target prediction of miRNAs in nonmodel organisms is still limited. In this study, we collected nearly all public sRNA-seq data to improve the annotation for known miRNAs and identify novel miRNAs that have not been annotated in pigs (Sus scrofa). We newly annotated 210 mature sequences in known miRNAs and found that 43 of the known miRNA precursors were problematic due to redundant/missing annotations or incorrect sequences. We also predicted 811 novel miRNAs with high confidence, which was twice the current number of known miRNAs for pigs in miRBase. In addition, we proposed a correlation-based strategy to predict target genes for miRNAs by using a large amount of sRNA-seq and RNA-seq data. We found that the correlation-based strategy provided additional evidence of expression compared with traditional target prediction methods. The correlation-based strategy also identified the regulatory pairs that were controlled by nonbinding sites with a particular pattern, which provided abundant complementarity for studying the mechanism of miRNAs that regulate gene expression. In summary, our study improved the annotation of known miRNAs, identified a large number of novel miRNAs, and predicted target genes for all pig miRNAs by using massive public data. This large data-based strategy is also applicable for other nonmodel organisms with incomplete annotation information.     

通过转化脂肪酸去饱和酶基因AcoFAD2提高菠萝植株的抗寒能力

为培育抗寒菠萝新品种,本研究通过比较菠萝脂肪酸去饱和酶基因序列和拟南芥脂肪酸去饱和酶基因序列,筛选获得目标基因AcoFAD2;通过农杆菌转化菠萝'台农17'获得过表达AcoFAD2转基因植株TN17FAD2-3;转基因植株和对照在低温条件下进行培养,鉴定转基因植株和对照的不饱和脂肪酸含量及抗寒能力.结果 发现组培苗在7℃条件下处理5d然后转入26℃生长一周,TN17FAD2-3第四片叶坏死比例为(5±1)％,只转化空载体的对照TN17-EV第四片叶坏死比例为(97±2)％.组培苗在7℃条件下生长5d,然后转入26℃生长15d.TN17FAD2-3第二片叶叶面积为(2.15±0.2) cm2,TN17-EV第二片叶叶面积为(0.06±0.01) cm2.TN17FAD2-3的叶片不饱和脂肪酸含量(16∶3+18∶3)为(77.5±0.7)％,对照TN17-EV叶片不饱和脂肪酸(16∶3+18∶3)含量为(58.6±0.8)％.TN17FAD2-3的叶片不饱和脂肪酸含量高于只转化空载体的对照TN17-EV.低温条件下,TN17FAD2-3比TN17-EV生长快,TN17FAD2-3株系比TN17-EV具有更高的抗寒性,载体UBI-pCAMBIA1301不能提高菠萝植株的抗寒能力,通过转化脂肪酸去饱和酶基因AcoFAD2能够提高菠萝植株的抗寒性能,本研究为快速培育抗寒菠萝新品种提供理论基础.     

Genetic bases of source-,sink-,and yield-related traits revealed by genome-wide association study in Xian rice

The source-sink relationship determines the ultimate grain yield.We investigated the genetic basis of the relationship between source and sink and yield potential in rice.In two environments,we identified quantitative trait loci(QTL)associated with sink capacity(total spikelet number per panicle and thousand-grain weight),source leaf(flag leaf length,flag leaf width and flag leaf area),source-sink relationship(total spikelet number to flag leaf area ratio)and yield-related traits(filled grain number per panicle,panicle number per plant,grain yield per plant,biomass per plant,and harvest index)by genome-wide association analysis using 272 Xian(indica)accessions.The panel showed substantial variation for all traits in the two environments and revealed complex phenotypic correlations.A total of 70 QTL influencing the 11 traits were identified using 469,377 high-quality SNP markers.Five QTL were detected consistently in four chromosomal regions in both environments.Five QTL clusters simultaneously affected source,sink,source–sink relationship,and grain yield traits,probably explaining the genetic basis of significant correlations of grain yield with source and sink traits.We selected 24 candidate genes in the four consistent QTL regions by identifying linkage disequilibrium(LD)blocks associated with significant SNPs and performing haplotype analysis.The genes included one cloned gene(NOG1)and three newly identified QTL(qHI6,qTGW7,and qFLA8).These results provide a theoretical basis for high-yield rice breeding by increasing and balancing source–sink relationships using marker-assisted selection.     

Wx^mp基因背景下可溶性淀粉合成酶基因SSⅡa和去分支酶基因PUL对水稻蒸煮食味品质的影响

【目的】分析在同一主效基因(Wx^mp)背景下可溶性淀粉合成酶基因SSⅡa和去分支酶基因PUL对稻米蒸煮食味品质的影响,以期为水稻品质遗传改良提供依据。【方法】选择在SSⅡa和PUL存在多态性而其他淀粉合成酶相关基因没有多态性的半糯品系宁0145和粳稻品种武运粳21进行杂交,获得F2群体与F3株系。利用分子标记,选择含有Wx^mp基因的F2单株与F3株系,将这些F2单株与F3株系分成SSⅡa^nPUL^n、SSⅡa^nPUL^w、SSⅡa^wPUL^n和SSⅡa^wPUL^w4种基因型(n和w分别表示该基因来源于宁0145和武运粳21),分析不同基因型蒸煮食味品质性状的差异,探讨同一Wxmp基因背景下不同SSⅡa和PUL等位基因对蒸煮食味品质性状的影响。【结果】不同基因型间蒸煮食味品质性状均存在显著差异,来源于武运粳21的SSⅡa^w基因和PUL^w基因分别使直链淀粉含量增加0.29%~1.00%和0.62%~1.18%,且PUL的效应大于SSⅡa,两者间存在互作效应。SSⅡa^w基因和PUL^w基因降低胶稠度和崩解值,提高了热浆黏度、冷胶黏度、消减值和回复值,对糊化温度、峰值黏度和峰值时间的作用较小。【结论】明确了Wx^mp背景下SSⅡa和PUL基因对稻米蒸煮食味品质的遗传效应,该研究结果为SSⅡa和PUL基因的分子标记辅助选择改良稻米品质提供了理论依据。     

残塬沟壑区果园复合种植对土壤动物群落特征的影响

为了解苹果复合种植即果-蔬[MB]、果-草[MH]、果-荒[MW]、果-粮[MZ]模式下土壤动物群落结构特征,采用手拣法和改良干、湿生漏斗法,对黄土残塬沟壑区苹果园4种复合种植模式下的土壤动物群落组成及特征进行调查研究。4种模式下共分离得到土壤动物57.33百只/m~2,隶属4门11纲23目42个类群。4种复合种植模式下土壤动物个体密度和类群数的垂直分布特征表现出明显的表聚特征,水平分布特征表现为果-草[MH]果-蔬[MB]果-荒[MW]≥果-粮[MZ]。果-草[MH]复合种植模式下土壤动物的多样性指数、均匀度指数及丰富度指数最高,优势度指数最低,表明4种复合种植模式对果园土壤动物类群多样性的影响呈现不同的特征。研究结果可为黄土残塬沟壑区苹果果园生物多样性保护提供土壤动物生态学依据。     

肉鸭粪便排放特征的季节性变化

本研究旨在探讨肉鸭粪便的特性,并对其不同季节的污染物排放特征进行评价,为肉鸭养殖场废弃物处理和资源化利用提供依据。分4个季节进行了北京Z型肉鸭饲养试验(饲养期37 d),记录采食量、产粪量,并定期测定饲料和粪便中水分和有机质含量及总氮(TN)、P、Cu、Zn含量。结果表明:肉鸭粪便中Zn含量秋季最高, TN、P、Cu含量均为冬季最高;冬季粪便中TN含量极显著高于夏、秋两季(P0.01); P、Cu含量在冬季均极显著高于其余季节(P0.01);粪便中Cu、Zn含量均为春季最低。肉鸭粪便平均含水率为84.61%,夏季最高,春季最低;平均有机质含量为83.38%,表现为冬春秋夏。春夏秋冬四季的粪便产生量分别为338.3g?d~(-1)?只~(-1)、275.9 g?d~(-1)?只~(-1)、317.6 g?d~(-1)?只~(-1)和327.0 g?d~(-1)?只~(-1),夏季最低。TN、P、Cu、Zn的排泄系数分别为2.13 g?d~(-1)?只~(-1)、2.48g?d~(-1)?只~(-1)、2.56 mg?d~(-1)?只~(-1)、21.10 mg?d~(-1)?只~(-1);春冬两季的TN日排泄量显著高于夏秋两季; P的日排泄量表现为冬季极显著高于其余3个季节;夏季Cu的日排泄量与春季差异不显著,极显著低于秋、冬两季(P0.01)。TN在秋季排泄占比最低,春季最高;而P排泄占比为秋季最高,春季最低。肉鸭在饲养期TN、P、Cu、Zn的排泄量与对应元素的摄入量具有极显著的正相关关系(P0.01)。研究表明:季节因素能对肉鸭粪便中含水率、有机质、TN、P、Cu和Zn含量产生显著影响,同时各季节各元素的排泄量与相应元素的摄入量显著相关。     

木耳菌渣稻苗基质化利用难点及解决技术

为有效转化利用废弃木耳菌渣,解决木耳菌渣稻苗基质化利用过程中出现的稻苗黄化现象问题,通过分析木耳菌渣理化性质及对水稻种子采取硫酸亚铁溶液浸种处理的方法,进行木耳菌渣稻苗基质化利用研究。结果表明:1)虽然腐熟菌渣的有机质含量、保水性及速效养分等特性有利于做水稻育苗基质,但盐分浓度较高、偏碱性、密度较小不适宜单一菌渣做育苗基质;2)单一菌渣基质培育稻苗,会出现黄化现象,原因在于单一菌渣基质有效铁含量偏低,造成了叶片含铁量少;3)硫酸亚铁浸种处理可以控制稻苗黄化现象,但会诱导植株株高伸长;4)0.014mol/L硫酸亚铁与0.051mmol/L多效唑混合浸种液在20℃下浸种处理3d,能够有效控制稻苗黄化现象和植株的徒长。同体积的腐熟菌渣和稻田土混合配制成的育苗基质,稻种采用硫酸亚铁溶液与多效唑溶液混合浸种处理的方法,能够育出壮实的大龄机插秧苗。