Influence of crop establishment methods on yield,economics and water productivity of rice cultivars under upland and lowland production ecologies of Eastern Indo-Gangetic Plains

A field study on assessment of crop establishment methods on yield, economics and water productivity of rice cultivars under upland and lowland production ecologies was conducted during wet seasons (June–November) of 2012 and 2013 in Eastern Indo-Gangetic Plains of India. The experiment was laid-out in a split-plot design (SPD) and replicated four times. The main-plot treatments included three crop establishment methods, viz. dry direct-seeded rice (DSR), system of rice intensification (SRI) and puddled transplanted rice (PTR). In sub-plots, five rice cultivars of different groups like aromatic (Improved Pusa Basmati 1 and Pusa Sugandh 5), inbreds (PNR 381 and Pusa 834) and hybrid (Arize 6444) were taken for their evaluations. These two sets of treatments were laid-out simultaneously in two production ecologies, upland and lowland during both years. In general, lowland ecology was found favourable for rice growth and yield and resulted in 13.2% higher grain yield as compared to upland ecology. Rice grown with SRI method produced 19.4 and 7.0% higher grain yield in 2012 and 20.6 and 7.1% higher in 2013, over DSR and PTR. However, PTR yielded 13.1 and 14.5% higher grain over DSR during 2012 and 2013, respectively. On an average, Arize 6444 produced 26.4, 26.9, 28.9 and 54.7% higher grain yield as compared to PS 5, P 834, PNR 381 and IPB1, respectively. Further, the interaction of production ecologies × crop establishment methods revealed that, in upland ecology, SRI recorded significantly higher grain yield as compared to PTR and DSR, but in lowland, grain yield resulting from SRI was similar to the yield obtained with PTR and significantly higher than DSR. The latter two methods (PTR and DSR) yielded alike in lowland ecology in both study years. The production ecologies × crop establishment methods × cultivars interaction on grain yield showed that the growing of Arize 6444 cultivar using SRI method in upland ecology resulted in the higher grain yield (8.87 t/ha). But the cost of production was also highest in SRI followed by PTR and DSR across production ecologies and cultivars. Cultivation of hybrid (Arize 6444) involved higher cost of production than all other cultivars. Irrespective of crop establishment methods and cultivars, gross returns, net returns and B:C ratio were significantly higher in lowland compared to upland ecology. Owing to higher grain yield, SRI method fetched significantly higher gross returns and net returns over PTR and DSR. Average increase in net return with Arize 6444 was 68.8, 41.0, 37.7 and 33.1% over IPB 1, PNR 381, P 834 and PS 5, respectively. There was a saving of 30.7% water in SRI and 19.9% in DSR over PTR under upland ecology. Similarly in lowland ecology, water saving of 30.2% was observed in SRI and 21.2% in DSR over PTR. Due to higher yield and saving on water, SRI returned significantly higher total water productivity (TWP) (5.9 kg/ha-mm) as compared to DSR (3.5 kg/ha-mm) and PTR (3.6 kg/ha-mm) under upland ecology. In lowland ecology, also SRI (6.2 kg/ha-mm) resulted in higher TWP as compared to other two methods. However, DSR gave significantly higher TWP as compared to PTR. Among cultivars, hybrid Arize 6444 recorded the highest TWP in both upland and lowland production ecologies across crop establishment methods. Hence, growing of hybrid Arize 6444 with SRI method can enhance rice productivity and water-use efficiency in lowland and upland production ecologies of Eastern Indo-Gangetic Plains and in other similar regions.     

Biocontrol potential of Pseudomonas azotoformans,Serratia marcescens and Trichoderma virens against Fusarium wilt of Dalbergia sissoo

Wilt disease caused by Fusarium solani is a serious constraint to Dalbergia sissoo (shisham) plantations in northern India. In this study, the antagonistic potential of 40 bacterial isolates recovered from rhizophere soil of healthy shisham trees, and a well‐characterized Trichoderma species (Trichoderma virens) were tested for their possibility as biocontrol agents for F. solani. Two promising isolates (S1 and S15) were identified which inhibited pathogen growth, caused chitin degradation, produced siderophores and solubilized phosphate in vitro. Isolate S15 scored highest for hydrogen cyanide (HCN) production while isolate S1 was a non‐HCN producer. These two isolates were identified as Serratia marcescens (S1) and Pseudomonas azotoformans (S15) following sequence analysis of 16S rDNA. In dual culture assays, T. virens caused 80% inhibition of mycelial growth of the test fungus. The three selected antagonists when tested in planta in the glasshouse completely suppressed production of wilt symptoms on 12‐month‐old shisham plants. Further work is needed to ascertain the potential of these isolates to be used as biocontrol agents to manage shisham wilt under field conditions.     

Exploring phosphorus fertilizers and fertilization strategies for improved human and environmental health

Biology and Fertility of Soils - Mineral phosphorus (P) fertilizers support high crop yields and contribute to feeding the teeming global population. However, complex edaphic processes cause P to...     

Identification and distribution of fungal pathogens associated with seedling blight of rice in the southern United States

Surveys were conducted in the five southern rice-producing states of Arkansas, Louisiana, Mississippi, Missouri and Texas in the United States during the 2018 and 2019 cropping seasons to determine the distribution and pathogenicity of fungal pathogens associated with seedling blight in rice. A total of 349 pathogenic fungal isolates were collected and identified as belonging to four genera: Rhizoctonia solani, Fusarium spp., Sclerotium rolfsii and Marasmius graminum based on morphological characteristics, molecular analysis and Koch's postulates. R. solani (252 out of 349 pathogenic isolates) was the most prevalent fungus isolated from diseased samples. Of the 252 pathogenic R. solani isolates, 245 were further classified as anastomosis group 11 (AG-11) and 7 as AG-4. Isolates of R. solani AG-4 and M. graminum were the most aggressive, with the highest stand loss (63% to 100%) and median disease rating (DR; 5.0), followed by isolates of R. solani AG-11 (stand loss = 4% to 100% and DR = 0.6 to 5.0), Fusarium spp. (stand loss = 26% to 48% and DR = 2.0 to 5.0) and S. rolfsii (stand loss = 33% to 48% and DR = 2.0 to 3.0) in causing seedling blight in rice. R. solani (62% to 83% of total pathogenic isolates) and Fusarium spp. (10% to 24% of total pathogenic isolates) were predominant in all the five states surveyed. S. rolfsii and M. graminum were present only in Louisiana and Texas. The results of this first systematic survey of rice seedling diseases in the southern United States will help develop effective fungicide seed treatment strategies for control of stand loss caused by seedling blight, one of the major factors limiting rice production.     

Comprehensive transcriptional profiling and functional study of lymphangiogenic growth factor in placentome of early-stage pregnant water buffalo

The aim of the present study was to evaluate the expression and localization of lymphangiogenic factors (VEGF-C and VEGF-D), their receptor (VEGFR3) and lymphatic endothelial marker (LYVE1) in buffalo placenta during early pregnancy [EP], and to investigate the functional role of lymphangiogenic growth factors in placental lymphangiogenesis. The mRNA and protein expression of VEGF-C, VEGF-D, their receptor VEGFR3 and LYVE1 showed significant expression in EP1 (29–42 days) and EP2 stages (51–82 days) both in caruncle (maternal part) and cotyledon (foetal part) of the buffalo placenta. Immunoreactivity of VEGF-C, VEGF-D and LYVE1 was observed around the endometrial gland, in lymphatics and trophoblast cells, whereas VEGFR3 mainly localized in lymphatics of the caruncle and cotyledons. Cultured trophoblast cells were treated with VEGF-C/VEGF-D (50, 100 and 150 ng/ml) and combined doses of VEGF-C and VEGF-D (150 ng/ml) each for different time durations (24, 48 and 72 h). The mRNA expression of LYVE1 and PCNA was significantly (p < .001) upregulated with VEGF-C and VEGF-D and combined treatment (@150 ng/ml), as well as significantly downregulating Caspase-3 at 48 and 72 h. Thus, the present study provides evidence that lymphangiogenic factors are expressed in buffalo placental compartments and they may play a significant role in the regulation of placental function in water buffaloes.     

Drought and heat stress reduce yield and alter carbon rhizodeposition of different wheat genotypes

Drought and high temperature are major environmental stress factors threatening wheat production during grain filling stage resulting in substantial yield losses. Four wheat genotypes (Suntop, IAW2013, Scout and 249) were planted under two temperature levels (25 and 30°C) and two water levels (15% and 25% soil moisture content). Wheat yield, leaf δ¹³C, plant rhizodeposition, shoot biomass and root traits were examined. Low moisture (drought stress) and high temperature (heat stress) decreased the grain yield of all wheat genotypes, in particular 249, while combined drought and temperature stresses had the most pronounced negative effect on plant biomass and grain yield. Decreasing soil water availability decreased the allocation of plant‐derived C to soil organic carbon (SOC) and to microbial biomass through rhizodeposition. Leaf δ¹³C decreased with increased yield, suggesting that higher yielding genotypes were less water stressed and allocated less C to SOC and microbial biomass through rhizodeposition. Wheat genotypes with lower root/shoot ratios and thinner roots were more efficient at assimilating C to the grain, while genotypes with higher root/shoot ratios and thicker roots allocated more C belowground through rhizodeposition at the expense of producing higher yield. Therefore, improving these traits for enhanced C allocation to wheat grain under variable environmental conditions needs to be considered.     

Detection and genetic diversity of porcine rotavirus A,B and C in eastern Australian piggeries

Rotaviruses (RV) have a high prevalence in piggeries worldwide and are one of the major pathogens causing severe diarrhoea in young pigs. RV species A, B, and C have been linked to piglet diarrhoea in Australian pig herds, but their genetic diversity has not been studied in detail. Based on sequencing of the structural viral protein 7 (VP7) RVA G genotypes G3, G4 and G5, and RVC types G1, G3, G5, and G6 have been identified in Australian piggeries in previous studies. Although occurrence of RVB was reported in Australia in 1988, no further genetic analysis has been conducted. To improve health management decisions in Australian pig herds, more information on RV prevalence and genetic diversity is needed. Here, 243 enteric samples collected from 20 pig farms within Eastern Australia were analysed for the presence of RV in different age groups using a novel PCR-based multiplex assay (Pork MultiPath™ enteric panel). RVA, RVB, and RVC were detected in 10, 14, and 14 farms, respectively. Further sequencing of VP7 in selected RV-positive samples revealed G genotypes G2, G5, G9 (RVA), G6, G8, G14, G16, G20 (RVB), and G1, G3, G5, G6 (RVC) present. RVA was only detected in young (<10 weeks old) pigs whereas RVB and RVC were also detected in older animals (>11 weeks old). Interestingly, RVB and RVC G-type occurrence differed between age groups. In conclusion, this study provides new insights on the prevalence and diversity of different RV species in pig herds of Eastern Australia whilst demonstrating the ability of the Pork MultiPath™ technology to accurately differentiate between these RV species.     

The linkage between the stem rust resistance gene Sr2 and pseudo-black chaff in wheat can be broken

Recessively inherited gene Sr2 has provided the basis of durable resistance to stem rust (caused by Puccinia graminis tritici) in wheat (Triticum aestivum L.) worldwide. The associated earhead and stem melanism or ‘pseudo‐black chaff’ is generally used as a marker for this gene. Sr2 has been postulated in many wheat cultivars of India including ‘Lok 1’, based on associated pseudo‐black chaff in adult plants, and leaf chlorosis in seedlings. However, dominant inheritance of the resistance factor operating in ‘Lok 1’, and a 13 : 3 (resistant : susceptible) F₂ segregation in the ‘Sr2‐line’ (‘Chinese Spring’⁶ × ‘Hope’ 3B) × ‘Lok 1’ cross confirmed that Sr2 was absent in ‘Lok 1’. Susceptible plants with a pseudo‐black chaff phenotype were observed in F₂ populations of ‘Agra Local’ (susceptible) × ‘Lok 1’, and the ‘Sr2‐line’ × ‘Lok 1’ crosses. Most of the F₃ families derived from the susceptible F₂ segregants with pseudo‐black chaff phenotypes were true breeding for the expression of pseudo‐black chaff with susceptibility to stem rust. Thus, linkage of pseudo‐black chaff with Sr2 in wheat can be broken, and hence, caution may be exercised in using pseudo‐black chaff as a marker for selecting Sr2 in breeding programmes.     

Inheritance of resistance to Fusarium wilt in Indian lentil germplasm (Lens culinaris Medik.)

Summary Three lentil genotypes resistant to Fusarium oxysporum f.sp. lentis viz. Pant L 234, JL 446 and LP 286 were crossed with two susceptible ones. The hybrid plants were all resistant in the eight crosses evaluated. Segregation pattern for wilt reaction in F₂, BC(P₁), BC(P₂) and F₃ generations in field and glasshouse conditions indicated that resistance to Fusarium wilt is under the control of two dominant duplicate genes in Pant L 234 and two independent dominant genes with complementary effects in JL 446 and LP 286. A third dominant gene complementary to the dominant genes in JL 446 and LP 286 is present in two susceptible lines. Allelic tests suggest the presence of five independently segregating genes for resistance. Duplicate dominant genes in Pant L 234 are non-allelic to two dominant genes with complementary effects in LP 286 and JL 446 and the third gene complementary to the two genes in JL 446 and LP 286 in susceptible lines JL 641 and L 9–12. Gene symbols among parental genotypes have been designated.