Influence of crop establishment methods on yield,economics and water productivity of rice cultivars under upland and lowland production ecologies of Eastern Indo-Gangetic Plains

A field study on assessment of crop establishment methods on yield, economics and water productivity of rice cultivars under upland and lowland production ecologies was conducted during wet seasons (June–November) of 2012 and 2013 in Eastern Indo-Gangetic Plains of India. The experiment was laid-out in a split-plot design (SPD) and replicated four times. The main-plot treatments included three crop establishment methods, viz. dry direct-seeded rice (DSR), system of rice intensification (SRI) and puddled transplanted rice (PTR). In sub-plots, five rice cultivars of different groups like aromatic (Improved Pusa Basmati 1 and Pusa Sugandh 5), inbreds (PNR 381 and Pusa 834) and hybrid (Arize 6444) were taken for their evaluations. These two sets of treatments were laid-out simultaneously in two production ecologies, upland and lowland during both years. In general, lowland ecology was found favourable for rice growth and yield and resulted in 13.2% higher grain yield as compared to upland ecology. Rice grown with SRI method produced 19.4 and 7.0% higher grain yield in 2012 and 20.6 and 7.1% higher in 2013, over DSR and PTR. However, PTR yielded 13.1 and 14.5% higher grain over DSR during 2012 and 2013, respectively. On an average, Arize 6444 produced 26.4, 26.9, 28.9 and 54.7% higher grain yield as compared to PS 5, P 834, PNR 381 and IPB1, respectively. Further, the interaction of production ecologies × crop establishment methods revealed that, in upland ecology, SRI recorded significantly higher grain yield as compared to PTR and DSR, but in lowland, grain yield resulting from SRI was similar to the yield obtained with PTR and significantly higher than DSR. The latter two methods (PTR and DSR) yielded alike in lowland ecology in both study years. The production ecologies × crop establishment methods × cultivars interaction on grain yield showed that the growing of Arize 6444 cultivar using SRI method in upland ecology resulted in the higher grain yield (8.87 t/ha). But the cost of production was also highest in SRI followed by PTR and DSR across production ecologies and cultivars. Cultivation of hybrid (Arize 6444) involved higher cost of production than all other cultivars. Irrespective of crop establishment methods and cultivars, gross returns, net returns and B:C ratio were significantly higher in lowland compared to upland ecology. Owing to higher grain yield, SRI method fetched significantly higher gross returns and net returns over PTR and DSR. Average increase in net return with Arize 6444 was 68.8, 41.0, 37.7 and 33.1% over IPB 1, PNR 381, P 834 and PS 5, respectively. There was a saving of 30.7% water in SRI and 19.9% in DSR over PTR under upland ecology. Similarly in lowland ecology, water saving of 30.2% was observed in SRI and 21.2% in DSR over PTR. Due to higher yield and saving on water, SRI returned significantly higher total water productivity (TWP) (5.9 kg/ha-mm) as compared to DSR (3.5 kg/ha-mm) and PTR (3.6 kg/ha-mm) under upland ecology. In lowland ecology, also SRI (6.2 kg/ha-mm) resulted in higher TWP as compared to other two methods. However, DSR gave significantly higher TWP as compared to PTR. Among cultivars, hybrid Arize 6444 recorded the highest TWP in both upland and lowland production ecologies across crop establishment methods. Hence, growing of hybrid Arize 6444 with SRI method can enhance rice productivity and water-use efficiency in lowland and upland production ecologies of Eastern Indo-Gangetic Plains and in other similar regions.     

Biocontrol potential of Pseudomonas azotoformans,Serratia marcescens and Trichoderma virens against Fusarium wilt of Dalbergia sissoo

Wilt disease caused by Fusarium solani is a serious constraint to Dalbergia sissoo (shisham) plantations in northern India. In this study, the antagonistic potential of 40 bacterial isolates recovered from rhizophere soil of healthy shisham trees, and a well‐characterized Trichoderma species (Trichoderma virens) were tested for their possibility as biocontrol agents for F. solani. Two promising isolates (S1 and S15) were identified which inhibited pathogen growth, caused chitin degradation, produced siderophores and solubilized phosphate in vitro. Isolate S15 scored highest for hydrogen cyanide (HCN) production while isolate S1 was a non‐HCN producer. These two isolates were identified as Serratia marcescens (S1) and Pseudomonas azotoformans (S15) following sequence analysis of 16S rDNA. In dual culture assays, T. virens caused 80% inhibition of mycelial growth of the test fungus. The three selected antagonists when tested in planta in the glasshouse completely suppressed production of wilt symptoms on 12‐month‐old shisham plants. Further work is needed to ascertain the potential of these isolates to be used as biocontrol agents to manage shisham wilt under field conditions.     

Fishmeal alternative from renewable CO2 for rainbow trout feed

The rapid global growth in fish farming and limited supply of fish meal (FM) has consequently reduced FM inclusion levels in compound feeds leading to a higher reliance on alternative protein sources. Sasya is a single cell protein (SCP) product that has a similar amino acid profile as FM. The aim of this study was to evaluate the effects of replacing FM with SCP on in vivo digestibility, growth, feed efficiency, whole‐body proximate/amino acid composition and gene expression levels of various hepatic enzymes in rainbow trout (Oncorhynchus mykiss). Three isonitrogenous (470 g/kg crude protein) and isolipidic (18 g/kg crude lipid) diets were formulated as follows: Diet 1: control (30% FM); Diet 2:24% FM + 6% SCP and Diet 3:18% FM + 12% SCP. Each diet was hand‐fed to triplicate tanks containing 30 rainbow trout fingerlings (4.99 ± 0.20 g) for 9 weeks. Apparent digestibility coefficients of SCP for dry matter, crude protein, lipid and energy were 60, 80, 93 and 74% respectively. Growth performance (final weight: 69–71 g), feed conversion ratios (0.91–0.94) as well as whole‐body protein and amino acid composition were unaffected by diets. However, Diet 3 significantly increased whole‐body crude fat and energy. Fish fed the SCP‐based diets had significantly higher expression for carnitine palmitoyltransferase‐1b (CPT1b), fatty acid delta 6 desaturase (FADS6) and fatty acid elongase 5 compared to the control. Overall, the quality of the SCP was similar as FM. Therefore, this product could enlarge the portfolio of alternative protein sources that can be used in fish diets and thus open a new market opportunity for use of a new feed resource in the feed industry.     

Exploring phosphorus fertilizers and fertilization strategies for improved human and environmental health

Biology and Fertility of Soils - Mineral phosphorus (P) fertilizers support high crop yields and contribute to feeding the teeming global population. However, complex edaphic processes cause P to...     

Comprehensive transcriptional profiling and functional study of lymphangiogenic growth factor in placentome of early-stage pregnant water buffalo

The aim of the present study was to evaluate the expression and localization of lymphangiogenic factors (VEGF-C and VEGF-D), their receptor (VEGFR3) and lymphatic endothelial marker (LYVE1) in buffalo placenta during early pregnancy [EP], and to investigate the functional role of lymphangiogenic growth factors in placental lymphangiogenesis. The mRNA and protein expression of VEGF-C, VEGF-D, their receptor VEGFR3 and LYVE1 showed significant expression in EP1 (29–42 days) and EP2 stages (51–82 days) both in caruncle (maternal part) and cotyledon (foetal part) of the buffalo placenta. Immunoreactivity of VEGF-C, VEGF-D and LYVE1 was observed around the endometrial gland, in lymphatics and trophoblast cells, whereas VEGFR3 mainly localized in lymphatics of the caruncle and cotyledons. Cultured trophoblast cells were treated with VEGF-C/VEGF-D (50, 100 and 150 ng/ml) and combined doses of VEGF-C and VEGF-D (150 ng/ml) each for different time durations (24, 48 and 72 h). The mRNA expression of LYVE1 and PCNA was significantly (p < .001) upregulated with VEGF-C and VEGF-D and combined treatment (@150 ng/ml), as well as significantly downregulating Caspase-3 at 48 and 72 h. Thus, the present study provides evidence that lymphangiogenic factors are expressed in buffalo placental compartments and they may play a significant role in the regulation of placental function in water buffaloes.     

The linkage between the stem rust resistance gene Sr2 and pseudo-black chaff in wheat can be broken

Recessively inherited gene Sr2 has provided the basis of durable resistance to stem rust (caused by Puccinia graminis tritici) in wheat (Triticum aestivum L.) worldwide. The associated earhead and stem melanism or ‘pseudo‐black chaff’ is generally used as a marker for this gene. Sr2 has been postulated in many wheat cultivars of India including ‘Lok 1’, based on associated pseudo‐black chaff in adult plants, and leaf chlorosis in seedlings. However, dominant inheritance of the resistance factor operating in ‘Lok 1’, and a 13 : 3 (resistant : susceptible) F₂ segregation in the ‘Sr2‐line’ (‘Chinese Spring’⁶ × ‘Hope’ 3B) × ‘Lok 1’ cross confirmed that Sr2 was absent in ‘Lok 1’. Susceptible plants with a pseudo‐black chaff phenotype were observed in F₂ populations of ‘Agra Local’ (susceptible) × ‘Lok 1’, and the ‘Sr2‐line’ × ‘Lok 1’ crosses. Most of the F₃ families derived from the susceptible F₂ segregants with pseudo‐black chaff phenotypes were true breeding for the expression of pseudo‐black chaff with susceptibility to stem rust. Thus, linkage of pseudo‐black chaff with Sr2 in wheat can be broken, and hence, caution may be exercised in using pseudo‐black chaff as a marker for selecting Sr2 in breeding programmes.     

Genetic analysis of a CSR10 (indica) × Taraori Basmati F3 population segregating for salt tolerance using ISSR markers

Segregation for salinity tolerance and ISSR markers based molecular polymorphism were investigated in a F₃ plant population raised via single-seed descent method from a cross between salt-tolerant indica rice variety CSR10 and salt-susceptible premium traditional Basmati rice variety Taraori Basmati HBC19. A total of 130 F₃plants were evaluated individually for salinity tolerance on 1–9 scale on the basis of seedling growth parameters; the average score ranged between 1.7 to 8.3. Frequency distribution curve obtained using the salinity tolerance data of F₃ population and a chi-square analysis, showed a good fit to a normal distribution. Eleven plants each in the category of salt-tolerant and salt-susceptible were selected from the segregating F₃ population for ISSR marker analysis. A total of 149 bands (4–11 bands per primer) ranging from 200 to 3530 bp were scored for the two rice varieties and the selected CSR10 × HBC19 segregating F₃ plants using 26 ISSR primers. Of these, 89 were monomorphic and 60 were polymorphic. Of the 60 polymorphic bands,36 and 20 bands were specific to CSR10 andHBC19 respectively. The remaining four bands were amplified using UBC primers 810,848, 853 and 886 and present in only some of the CSR10 × HBC19 F₃ plants. Notably, ISSR primers with dinucleotide repeat motif and 5'-anchored end amplified more number of bands (7.0 bands/primer) compared to3'-anchored dinucleotide primers (5.4bands/primer), but 3'-anchored dinucleotide primers revealed higher level of polymorphism (2.6 polymorphic bands/primer) compared to 5'-anchoreddinucleotide primers (1.43 polymorphic bands/ primer). While distribution of majority of the polymorphic bands were more or less in the expected ratios in salt-tolerant and/or salt-sensitive F₃segregating plants, but some of the bands amplified using UBC ISSR primers 823, 825,826, 849, 853, 864, 866 and 884 showed highly skewed distribution. Such polymorphic bands stand greater chances of having a linkage with the genes/ QTLs for salinity tolerance and shall be the target for further studies. This revised version was published online in July 2006 with corrections to the Cover Date.     

Inheritance of resistance to Fusarium wilt in Indian lentil germplasm (Lens culinaris Medik.)

Summary Three lentil genotypes resistant to Fusarium oxysporum f.sp. lentis viz. Pant L 234, JL 446 and LP 286 were crossed with two susceptible ones. The hybrid plants were all resistant in the eight crosses evaluated. Segregation pattern for wilt reaction in F₂, BC(P₁), BC(P₂) and F₃ generations in field and glasshouse conditions indicated that resistance to Fusarium wilt is under the control of two dominant duplicate genes in Pant L 234 and two independent dominant genes with complementary effects in JL 446 and LP 286. A third dominant gene complementary to the dominant genes in JL 446 and LP 286 is present in two susceptible lines. Allelic tests suggest the presence of five independently segregating genes for resistance. Duplicate dominant genes in Pant L 234 are non-allelic to two dominant genes with complementary effects in LP 286 and JL 446 and the third gene complementary to the two genes in JL 446 and LP 286 in susceptible lines JL 641 and L 9–12. Gene symbols among parental genotypes have been designated.     

Inheritance of albinism in certain interspecific and intersubspecific crosses in groundnut (Arachis hypogaea L.)

Summary A study of the several interspecific and inter-subspecific crosses indicated that albinism in groundnut is recessive and in these crosses is controlled by triplicate recessive loci.ICRISAT Paper No. JA-336