Genetic evaluation using random regression models with different covariance functions for test‐day milk yield in an admixture population of Thailand goats

The objectives of this study were to compare covariance functions (CF) and estimate the heritability of milk yield from test‐day records among exotic (Saanen, Anglo‐Nubian, Toggenburg and Alpine) and crossbred goats (Thai native and exotic breed), using a random regression model. A total of 1472 records of test‐day milk yield were used, collected from 112 does between 2003 and 2006. CF of the study were Wilmink function, second‐ and third‐order Legendre polynomials, and linear splines 4 knots located at 5, 25, 90 and 155 days in milk (SP25–90) and 5, 35, 95 and 155 of days in milk (SP35–95). Variance components were estimated by restricted maximum likelihood method (REML). Goodness of fit, Akaike information criterion (AIC), percentage of squared bias (PSB), mean square error (MSE), and empirical correlation (RHO) between the observed and predicted values were used to compare models. The results showed that CF had an impact on (co)variance estimation in random regression models (RRM). The RRM with splines 4 knots located at 5, 25, 90 and 155 of days in milk had the lowest AIC, PSB and MSE, and the highest RHO. The heritability estimated throughout lactation obtained with this model ranged from 0.13 to 0.23.     

Optimal vision-based guidance row locating for autonomous agricultural machines

Precision Agriculture - With the rapid advances in precision agriculture technology, machine vision is emerging as a means to obtain accurate spatial information for a control system at relatively...     

Effect of season and outdoor climate on litter size at birth in purebred landrace and yorkshire sows in Thailand

The objective of the present study was to retrospectively investigate causes of variation on litter size at birth (total number of piglets born per litter (TB) and number of piglets born alive per litter (BA)) of Landrace (L) and Yorkshire (Y) sows in swine nucleus herds in Thailand. The data included sows farrowed during a four-year period from January 1998 to December 2001. The analyzed data set included observations on 8020 litters from 2199 L sows and 6919 litters from 1680 Y sows. Analysis of variance (ANOVA) was applied for statistical analyses using General Linear Mixed Model (MIXED) procedure of SAS. No breed difference was found for both TB and BA. Farrowing months significantly influenced TB and BA (P<0.001). Sows farrowed in August and September had a lower BA than sows farrowed from November to June (P<0.05). Effect of farrowing months on both TB and BA was more pronounced in primiparous compared with multiparous sows. Average minimum daily temperature during gestation negatively correlated with both TB and BA, average maximum daily temperature during gestation negatively correlated with BA and average daily humidity during gestation negatively correlated with both TB and BA. The correlations were stronger in L than in Y sows.     

The effect of activation protocols on the development of cloned goat embryos

This study was conducted to compare the developmental competence of somatic nuclear transfer (NT) embryos, after either ionomycin or ethanol activation, in locally bred goats. Donor cells were prepared from the ear skin fibroblasts of a female goat. Cells, at passage 3-8, starved by culturing in 0.5% FCS for 4-8 d, were used for NT. Immature oocytes were obtained from FSH-stimulated goats and matured for 22 hr before enucleation and NT. After fusion, the reconstructed embryos were activated with either ionomycin or ethanol followed by culturing in 6-dimethylaminopurine (6-DMAP) and cytochalasin B (CB), for 3 hr. In experiment I, the fused NT embryos (n=63, ionomycin and n=68, ethanol treatments, respectively) were cultured in B2 with a Vero co-culture system and their developmental competence was evaluated through to Day 9. In experiment II, the NT embryos at the 2-4 cell stage on Day 2 derived from each treatment (ionomycin n=46, and ethanol n=37), were transferred into 10 synchronous recipients. There were no significant differences between the NT embryos derived from the ionomycin and ethanol groups, in fusion (86.3% versus 82.9%), cleavage (90.5% versus 82.4%) and for morula/blastocyst development rates (9.5% versus 5.9%). Sixty percent (3/5) of the recipients from ionomycin became pregnant by midterm (2.5 mts) while only 20% (1/5) from ethanol treatment was pregnant by Day 45. The results demonstrate that activation with either ionomycin or ethanol in combination with 6-DMAP-CB treatment does not affect the development of cloned goat embryos.     

The effect of a catastrophic flood disaster on livestock farming in Nakhon Sawan province, Thailand

In 2011, a catastrophic flood disaster in Thailand affected not only humans but also took animal lives. Data on livestock losses, including death, loss, and decreased production, were collected in Nakhon Sawan province. The time-series map of the flooded area from August to December 2011 was available online from the Geo-informatics and Space Technology Development Agency. To evaluate the high-density areas of livestock loss, a spatial hot spot analysis was performed. The Getis-Ord Gi statistic with weighted zone of indifference and the Euclidean distance measurement were employed to identify spatial clusters of species that were affected by the flood. The results indicated that the majority of livestock losses were from poultry and swine farms. The density of poultry and swine loss was significantly different between sub-districts with clusters of high-density loss alongside the river, particularly in Chum Saeng and Kao Liew. Using spatial hot spot analysis as a tool to classify and rank the areas with high flood risks provides an informative outline for farmers to be aware of potential flood damage. To avoid unexpected loss from flooding, poultry and swine farms in risk areas should be properly managed, particularly during the flooding season between August and December.     

Molecular signature and colony morphology affect in vitro pluripotency of porcine induced pluripotent stem cells

Overall efficiency of cell reprogramming for porcine fibroblasts into induced pluripotent stem cells (iPSCs) is currently poor, and few cell lines have been established. This study examined gene expression during early phase of cellular reprogramming in the relationship to the iPSC colony morphology and in vitro pluripotent characteristics. Fibroblasts were reprogrammed with OCT4, SOX2, KLF4 and c-MYC. Two different colony morphologies referred to either compact (n = 10) or loose (n = 10) colonies were further examined for proliferative activity, gene expression and in vitro pluripotency. A total of 1,697 iPSC-like colonies (2.34%) were observed after gene transduction. The compact colonies contained with tightly packed cells with a distinct-clear border between the colony and feeder cells, while loose colonies demonstrated irregular colony boundary. For quantitative expression of genes responsible for early phase cell reprogramming, the Dppa2 and EpCAM were significantly upregulated while NR0B1 was downregulated in compact colonies compared with loose phenotype (p < .05). Higher proportion of compact iPSC phenotype (5 of 10, 50%) could be maintained in undifferentiated state for more than 50 passages compared unfavourably with loose morphology (3 of 10, 30%). All iPS cell lines obtained from these two types of colony morphologies expressed pluripotent genes and proteins (OCT4, NANOG and E-cadherin). In addition, they could aggregate and form three-dimensional structure of embryoid bodies. However, only compact iPSC colonies differentiated into three germ layers. Molecular signature of early phase of cell reprogramming coupled with primary colony morphology reflected the in vitro pluripotency of porcine iPSCs. These findings can be simply applied for pre-screening selection of the porcine iPSC cell line.     

Interspecies nuclear transfer embryos reconstructed from cat somatic cells and bovine ooplasm

This study was conducted to investigate the developmental capacity of domestic cat-bovine reconstructed embryos via interspecies somatic cell nuclear transfer (iSCNT) and to observe the mitochondrial DNA (mtDNA) content of the iSCNT embryos. The iSCNT embryos were generated using mixed-breed domestic cat fibroblasts as donor cells and enucleated bovine oocytes as the recipient cytoplasm. When the developmental capacities of iSCNT embryos and parthenogenic bovine embryos were compared, there was no difference (P>0.05) in the rates of cleavage and development to the 8-cell stage (86.6 vs. 84.0% and 32.2 vs. 36.2%, respectively). However, in contrast to development of parthenogenic embryos to the morula and blastocyst stages, no iSCNT embryos (0/202) developed beyond the 8-cell stage. For mtDNA analysis, iSCNT embryos at the 1-cell, 2-cell, 4-cell and 8-cell stages were randomly selected. Both cat and bovine mtDNA quantification analysis were performed using quantitative PCR. The levels of both cat and bovine mtDNA in cat-bovine iSCNT embryos varied at each stage of development. The cat mtDNA concentration in the iSCNT embryos was stable from the 1-cell to 8-cell stages. The bovine mtDNA in the iSCNT embryos at the 8-cell stage was significantly lower than that at the 4-cell stage (P<0.05). No difference in the proportions of cat mtDNA in the iSCNT embryos was found in any of the observed developmental stages (1- through 8-cell stages). In conclusion, bovine cytoplasm supports domestic cat nucleus development through the 8-cell stage. The mtDNA genotype of domestic cat-bovine iSCNT embryos illustrates persistence of heteroplasmy, and the reduction in mtDNA content might reflect a developmental block at the 8-cell stage.     

Transvaginal follicle aspiration in Thai swamp buffalo heifers using different vacuum pressures after FSH pretreatment (Bubalus bubalis)

The objective of the experiment was to study oocyte recovery by transvaginal, ultrasound-guided, follicle aspiration, from Thai swamp buffalo using different vacuum pressures. Six adult buffalo heifers, aged 2.5-3.0 yrs were treated with a total dose of 280 mg FSH, given twice a day in a divided doses over a three day period (60/60 mg, 50/50 mg, 30/30 mg) at d7 after progesterone implant. Three vacuum pressures were used; 100 (n=12), 80 (n=12) and 60 mmHg (n=12) and all of the pressures were performed in each animal. The animals were treated repeatedly and collection took place using 2 sets of each pressure every 2 months, giving a total of 36 collections from each animal. The oocyte recovery rates from each pressure were 81.2% (69/85) 79.1% (53/67) and 90.3% (93/103) for 100, 80 and 60 mmHg respectively. The number of oocytes collected per donor were 5.33 +/- 3.27, 4.42 +/- 2.71 and 7.75 +/- 4.31 respectively. The quality of the oocytes did not improved with the lower vacuum pressure. In conclusion, the application of FSH pretreatment improves the yield of oocytes from Thai, swamp buffalo heifers after gonadotropin treatment when using the vacuum pressures between 60-100 mmHg.