Pattern-oriented modeling of agent-based complex systems: lessons from ecology

Agent-based complex systems are dynamic networks of many interacting agents; examples include ecosystems, financial markets, and cities. The search for general principles underlying the internal organization of such systems often uses bottom-up simulation models such as cellular automata and agent-based models. No general framework for designing, testing, and analyzing bottom-up models has yet been established, but recent advances in ecological modeling have come together in a general strategy we call pattern-oriented modeling. This strategy provides a unifying framework for decoding the internal organization of agent-based complex systems and may lead toward unifying algorithmic theories of the relation between adaptive behavior and system complexity.     

Rind puncture resistance in maize: inheritance and relationship with resistance to pink stem borer attack

The main pest of maize in north‐western Spain is the pink stem borer, Sesamia nonagrioides, and stem lodging is one of the consequences of attack. Since rind puncture resistance is related to stem lodging resistance, the objectives of this work were to estimate the genetic effects involved in the inheritance of rind puncture resistance and to determine the phenotypic correlation coefficients between rind puncture resistance and pink stem borer damage. Six generations from the crosses ‘CM109’בEP31’ and ‘CM109’בEP42’ and a 10‐inbred line diallel were evaluated in Pontevedra, Spain, in 1995 and 1996. The inheritance of rind puncture resistance had two significant components, one additive and one dominant. Non‐allelic and genotype × environment interactions were not significant. Improvement for internode rind puncture resistance to increase stem strength and stalk lodging resistance could have some positive influence on resistance to pink stem borer. However, its use as an estimator of pink stem borer resistance cannot be generalized and so must be restricted to programmes that involve materials exhibiting physical resistance to pink stem borer attack.     

In vitro effect of classical swine fever virus on a porcine aortic endothelial cell line

The effect of classical swine fever (CSF) virus on some phenotypic and functional features of an established porcine aortic endothelial cell (AOC) line was investigated. AOC cells show most of the characteristics of primary endothelial cells, avoiding the alterations and senescence that these cells undergo after a few passages in culture. AOC cells were susceptible to CSF virus infection to a high degree, reaching 90% of CSF virus positive cells after 24 h of infection; however as with other porcine susceptible cells, no cytopathic effect could be observed. In these conditions none of the surface molecules studied, including SLA-II MHC antigens, adhesion or co-stimulatory molecules, were altered by virus infection after 24 or 48 h. Functionally CSF virus infection induced a decrease in the pro-coagulant activity of the AOC cells, determined by the increase in the clot formation time shown by the lysates of these cells. This contrasts with the increase observed in the expression of mRNA corresponding to IL-1 alpha and IL-6, two proinflammatory and pro-coagulant cytokines, in CSF virus-infected AOC cells.     

Effects of selection for color intensity on antioxidant capacity in maize (Zea mays L.)

Maize kernels with diverse colors have pigments and other substances with antioxidant capacity that can be highly beneficial for human health. Our objectives were to analyze antioxidant capacity of the different maize kernel colors, to investigate if selection for color intensity increases antioxidant capacity and to check the effect of bakery processing on antioxidant capacity. Pigment content was directly related to antioxidant capacity in maize kernels and also to the hydrophilic fraction, while the lipophilic fraction was not related to antioxidant capacity. Visual selection for kernel color increased anthocyanin content from 0.55 to 1.13 μmol/g of fresh weight in one unique cycle of selection. The traditional method for making maize bread out of whole maize flour has not significant effects on pigment content or antioxidant capacity. Therefore, maize bread made out of black or purple maize provides significant amounts of antioxidant substances potentially beneficial for human health.     

Characterization of widespread canine leishmaniasis among wild carnivores from Spain

Visceral Leishmaniasis (VL) is an emerging zoonotic parasitic disease caused by Leishmania infantum in Mediterranean countries, with sand flies (Phlebotomus spp.) as vectors and dogs as the main domestic reservoir. The role of wild carnivores in the epidemiology of leishmaniasis is still controversial. In order to determine the prevalence of natural infection with L. infantum in wild carnivores from Spain, we analyzed 217 samples by PCR and western blotting and used restriction fragment length polymorphism (RFLP) to compare the patterns present in wild carnivores with those of domestic dogs from the same areas. DNA of the parasite was detected in spleen or blood samples from 35 (16.12%) analyzed wild carnivores, including 8 of 39 (20.5%) wolves (Canis lupus), 23 of 162 (14.1%) foxes (Vulpes vulpes), 2 of 7 (28.6%) Egyptian mongooses (Herpestes ichneumon), 1 of 4 genets (Geneta geneta), and 1 of 4 Iberian lynxes (Lynx pardinus). No significant sex or age differences in prevalence were observed in wolves and foxes (P>0.05), but there was a significant difference among regions in foxes (P<0.05). A total of 12 PCR-RFLP patterns were found in foxes, 6 in wolves, 4 in dogs, 2 in Egyptian mongooses and 1 in lynx and genet. RFLP patterns differed between dogs and foxes in the two areas where they could be compared. This is the first study of canine leishmaniasis in wild canids and other carnivores from different regions of Spain by PCR. The prevalence of infection indicates the existence of natural infection in apparently healthy wild carnivore populations, and our results are suggestive of a sylvatic cycle independent of dogs.     

Expression of toll-like receptor 2 (TLR2) in porcine leukocyte subsets and tissues

Toll-like receptors (TLR) are a group of pattern recognition molecules that play a crucial role in innate immunity. TLR2 recognises a variety of microbial components leading to the development of inflammatory and immune responses. To characterise the expression and functional properties of porcine TLR2 (pTLR2), we have raised a panel of monoclonal antibodies (mAb) against this molecule. Mouse 3T3 cell transfectants expressing pTLR2 were used for immunisation of mice. The specificity of these antibodies was confirmed by their reactivity with CHO cells transfected with pTLR2 but not with pTLR4 or with non-transfected cells. Using one of these mAbs, named 1H11, pTLR2 was found on cells of the innate immune system, including monocytes, macrophages, and granulocytes, but not on peripheral blood lymphocytes. Staining of tissue sections showed that pTLR2 is also expressed on epithelial cells lining the tracheobronchial and intestinal tracts, bile ducts in the liver and renal tubules, and on the basal layer of the epidermis. This distribution is consistent with a surveillance function at entry sites, allowing for early detection of microbial invasion.     

Identification of drought tolerant populations at multi-stage growth phases in temperate maize germplasm

Drought is one of the main abiotic stresses in agriculture worldwide. Drought could increase under the predicted scenario of climate change, particularly in the Mediterranean area. Breeding for drought tolerance requires screening of germplasm in order to identify sources of tolerance; therefore, were evaluated 51 diverse open-pollinated maize populations from various temperate regions under increasing levels of drought at germination, seedling establishment and early growth. There was genetic variability for drought tolerance among populations at all growth phases. Several populations from diverse origins and germplasm groups exhibited high germination across stress treatments. Some of those populations had high ability to sustain root development and showed differential performance depending on the stage of development and the phenotypic aspect considered. In general, BS17 showed high germination rate, fast seedling growth and early vigor under drought. Longlellow and Grano de trigo showed high germination and growth establishment rates, whereas AS3(HT)C3 showed high germination rate and early vigor under drought. The photosynthetic rate, stomatal conductance and transpiration of Enano Levantino/Hembrilla (ELH) and BS17 populations were not affected by drought. Water use efficiency of BS17, ELH, Northwestern Dent (NWD) and Viana was not affected by drought. Some of these populations are promising sources of drought tolerance which can provide different mechanisms of drought tolerance at different stages of plant development. Therefore, these results open new possibilities of breeding for drought tolerance by combining those mechanisms through crosses among potential donors. Furthermore, these findings indicate that it is worthwhile to study the genetic and biological basis of such mechanisms.