Recovery of sperms bearing X chromosomes with different concentrations of magnetic nanoparticles in ram

Pre-conceptual sex selection is still a highly debatable process whereby X and Y chromosome bearing spermatozoa are isolated before oocyte fertilization. Recently, magnetic nanoparticles (MNP) have been used to determine X and Y chromosomes bearing spermatozoa as a result of searching for a cheap, highly efficient method using non-toxic materials. This study aimed to recover the sperm bearing X chromosomes in ram with different concentrations of MNP and then evaluate the success of this method using polymerase chain reaction (PCR). Ram sperms were divided into four groups, treated with 0 (control), 50, 100 and 200 μg/ml MNP, respectively. MNP was used to restore sperm cells bearing X chromosomes. Upon recovery, the PCR was performed to identify the X and Y sperms, Methyl ThiazoleTetrazolium (MTT), to assess MNP toxicity and sperm viability and acridine orange (AO) to evaluate sperm DNA integrity. The results of PCR revealed that the treatment of spermatozoa- bearing X chromosomes with 50 μg/ml MNP had the highest effects on the recovery of X sperm rather than the other concentrations of MNP. However, the concentrations of MNP did not have any toxic effects on spermatozoa, sperm viability and, DNA integrity, but the high concentration of MNP (200 μg/ml) significantly reduced DNA integrity. According to MTT and AO results, the concentrations of MNP used in this study had no toxic effects on spermatozoa and did not reduce the sperm viability and DNA integrity, except that 200 μg/ml MNP significantly reduced DNA integrity.     

Production of monoclonal antibody against recombinant bovine sex-determining region Y (SRY) and their preferential binding to Y chromosome-bearing sperm

Separation of X and Y chromosome-bearing sperm is an appropriate method for the selection of desired sex of offspring to increase the profit in livestock industries. The purpose of this study was the production of a monoclonal antibody against recombinant bovine sex-determining region Y protein for separation Y sperm. The hybridoma cells from splenocytes of immunized female's balb/C mice and Sp2/0 cells were made. The binding affinity of our monoclonal antibody (mAbSRY2) was compared with mouse monoclonal SRY-15. The Western blot method indicated that mAbSRY2 successfully detected the rbSRY protein. The specificity and sensitivity of mAbSRY2 is comparable to SRY-15 commercially ones. The SRY gene in 100% of bull semen contains the Y chromosome that had the strongest binding affinity to mAbSRY2 was synthesized. In other words, the binding affinity of semen contains the X sperms near the negative control. In general, this immunological method can help to separate X from Y sperms. However, the mAbSRY2 is bind to Y-bearing sexed sperm, but in the future; the sexed sperms need to apply in farms.     

Composite site-productivity functions for Northeastern Ontario black spruce

Data from 122 northeastern Ontario plots were used to develop composite site-productivity functions for black spruce (Picea mariana [Mill.] B.S.P.). A logistic model produced the best fit to the data. The resulting equations produce sets of polymorphic site-productivity curves with subsets of three curves, one for each of Ontario's Forest Ecosystem Classification Operational Groups (FEC OGs) 11, 12 and 14. For direct estimates of site productivity, site index was expressed as a function of stand height, age and FEC OG by employing the reciprocal of the logistic model. Application of the resulting equations and tables is demonstrated in an example. The procedures employed may be used to develop ecologically based site-productivity functions for other areas.     

Economic evaluation of forest drainage and fertilization in northern Ontario peatlands with an investment decision model

Drainage and fertilization of an existing peatland black spruce (Picea mariana (Mill.) B.S.P.) stand and 24 possible methods of planting a clear-cut area near Cochrane, Ontario were evaluated by means of a recently developed forestry investment decision model, FIDME.Results indicate that, on the basis of the cost estimates used and assumptions made, drainage of the existing stand is the most economical treatment if it can reduce the rotation age by 30 years or more. Drainage combined with fertilization is the second best alternative if this treatment can reduce the rotation age by 40 years or more. Fertilization of the undrained site ranks a distant third, and then only if it reduces the rotation age by 10 years; otherwise, it will be uneconomical to apply.In the case of the clear-cut area, planting bare-root stock on a mechanically prepared but undrained site without weed control ranked first among the 24 alternatives considered; the same treatment, but with weed control included, ranked second. Planting containerized seedlings on a mechanically prepared but undrained site with weed control ranked third, followed by planting bare-root stock on a mechanically prepared and drained site with weed control. In contrast, planting containerized seedlings on an unprepared site and with no weed control ranked as the least cost-effective method considered.     

Analysis of genetic diversity and population structure of confectionery sunflower (<Emphasis Type="Italic">Helianthus annuus</Emphasis> L.) native to Iran

Genetic diversity within and among 50 populations of confectionery sunflower (Helianthus annuus L.) collected from different geographical areas of Iran was evaluated by using microsatellite and retrotransposon markers. The number of alleles (Na) in SSR loci ranged from 2 to 3 with an average of 2.1. The polymorphic bands in retrotransposon markers ranged from 7 in locus CR-UR1 to 15 in locus CR-816 with a mean value of 11.33. Herarchical clustering of individuals (50 × 5 = 250) by neighbor joining method in DARwin5 software subdivided them into three groups. Using Bayesian method in the software pakage of Structure, the studied individuals were subdivided into two sub-populations. Principal coordinate analysis revelaed that the two first components explaine 7.86 and 6.16% of the total variance, respectively. Analysis of molecular variance revealed a higher level of genetic variation within (70%) than between (30%) populations. High molecular variation among individuals within population possibly is due to high allogamy nature of the sunflower plant. Low genetic variation observed between populations could be considered as a consequence of genetic equilibrium that has occurred over the long period of cultivation of confectionery sunflower in this area as well as seed exchange among regions. The traditional assumption that selecting genotypes of different geographical origin will maximize the diversity available to a breeding project does not hold in confectionery sunflower.     

Spatial variability of water retention parameters and saturated hydraulic conductivity in a calcareous Inceptisols (Khuzestan province of Iran) under sugarcane cropping

The objective of this study was to quantify inherent spatial variability and spatial cross-correlation of the van Genuchten retention parameters and saturated hydraulic conductivity (K_s) of surface and subsurface layers in a calcareous Inceptisols (Khuzestan province, Iran) under sugarcane cropping. Measurements were performed on 100-cm³ undisturbed soil cores collected at 94 locations along a 30-m-long transect with horizontal sampling distance intervals of 0.3 and 1 m at soil depths of 0–40 and 40–80 cm, respectively. Spatial variability was investigated using conventional statistics and geostatistical techniques. Coefficient of variation (CV) varied from 8.2% (for shape parameter, n at 40–80 cm depth) to 256.7% (for K_s at 0–40 cm depth). The n parameter and saturated water content, θ_s, showed a small-scale spatial heterogeneity with a maximum CV of 11.3% for the first depth and 9.2% for the second depth. Most of the hydraulic parameters at both depths showed a spatial structure and convex experimental semivariograms with dominant spherical models with the influence range of 3.2–41 m. In most cases, the extent of spatial correlation scales of cross-semivariograms for pairs of cross-correlated hydraulic variables was found to be different with reference to those relating to the direct semivariograms of correlated variables.     

Effect of efficient pectinolytic bacterial isolates on retting and fibre quality of jute

Four bacterial strains with high balanced polygalacturonase (PG) and pectin lyase (PNL), and xylanase with minimal cellulase activity were used in jute retting. The 16S rDNA analysis revealed that the organisms were: Bacillus sp. L6 (GQ891097), Bacillus pumilus strain EK-17 (GQ891098), B. pumilus strain Geo-03-422 (GQ891103) and B. pumilus strain IK-MB12-518F (GQ891105). The microorganisms in different combinations of consortia showed synergistic effect resulting in increased PG (35.52-46.61 IU/g cell wet weight), PNL (39.79-72.12 U/ml), xylanase (0.705-0.840 μmol/ml/min) and little cellulase (0-0.153 μmol/ml/min) activities. The organisms in different combinations of consortia reduced the retting period from 11 to 13 days as compared to 19 days in the control. Microbial inoculation produced remarkable improvement in jute fibre strength (26.62-28.91 g/tex) and fineness (2.76-2.92 tex) over control. The pH of the post-retting water samples became acidic, and the electrical conductivity (Ec), chemical oxygen demand (COD) and hardness increased. The organisms could be adopted in industrial application for extraction of jute fibre.     

Total Oxidative status of Mouse Vitrified Pre-Antral Follicles with Pre-Treatment of Alpha Lipoic Acid

Background: Cryopreservation of pre-antral follicles is a hopeful technique to preserve female fertility. The aim of the present study was to evaluate reactive oxygen species (ROS) and total antioxidant capacity (TAC) levels of mouse vitrified pre-antral follicles in the presence of alpha lipoic acid (ALA). Methods: Isolated pre-antral follicles (140–150 µm in diameter) were divided into vitrified–warmed and fresh groups. Each group was subjected to in vitro maturation with or without ALA for 12 days, followed by adding human chronic gonadotropin to induce ovulation. In vitro fertilization was performed to evaluate their developmental competence. In parallel, the amount of ROS and TAC were assessed after 0, 24, 48, 72, and 96 h of culture by 2'',7''-dichlorofluorescin assay and ferric reducing/antioxidant power assay, respectively. Results: The respective rates of survival, antrum formation, and metaphase II oocytes were significantly higher in ALA-supplemented groups compared to the groups not treated with ALA. TAC and ROS levels were significantly decreased and increased, respectively during the culture period up to 96 h in the absence of ALA in both vitrified and non-vitrified samples. However, with pretreatment of ALA, TAC levels were increased significantly and remained constant up to 96 h in vitrified-warmed pre-antral follicles, while ROS levels completely returned to the level of starting point after 96 h of culture in the presence of ALA. Conclusion: Pretreatment of ALA positively influences development of pre-antral follicles in vitrified and non-vitrified samples through increasing follicular TAC level and decreasing ROS levels. Key Words: Vitrification, Pre-antral follicle, Alpha lipoic acid (ALA), Reactive oxygen species (ROS), Total antioxidant capacity (TAC)     

Availability and Uptake of Phosphorus and Zinc by Maize in the Presence of Phosphate-Containing Zn-Al-LDH in a Calcareous Soil

Eurasian Soil Science - In this research, the potential application of phosphate containing zinc-aluminum-layered double hydroxide (Zn-Al-P-LDH) to enhance the availability of P and Zn compared to...     

Application of modal-based damage-detection method to locate and evaluate damage in timber beams

Modal-based damage-detection algorithms were used to identify the location of defects commonly found in timber and to estimate their severities. In this study, the authors propose modifications to an existing damage-detection algorithm for locating and evaluating damage by comparing the modal strain energy before and after damage using the first two flexural modes of vibration. Experimental verification was performed on pin-pin supported timber beams by employing the algorithms with extracted modal parameters using experimental modal analysis. Single and multiple cases of damage used to simulate pocket(s) of rot with various severities were inflicted by removing sections of timber beam specimens. The proposed damage indicator, computed from the first two flexural modes, was capable of detecting all damage locations. It was also able to estimate, with reasonable accuracy, the severity of damage in term of loss of sectional moment of inertia. The modified damage index method is generally reliable in detecting the location and estimating the severity of simulated defects in timber beams.