Involvement of microaerophilic iron-oxidizing bacteria in the iron-oxidizing process at the surface layer of flooded paddy field soil

Journal of Soils and Sediments - To reveal whether microaerophilic Fe(II)-oxidizing bacteria (FeOB) participate in the Fe(II) oxidation at the oxic-anoxic interface in flooded paddy field soil,...     

Iristectorone K,a novel monocyclic triterpene ester from Iris germanica rhizomes growing in Turkey

A new monocyclic triterpene ester (1) was isolated from the rhizomes of Iris germanica from Turkey. Structure elucidation of compound (1) was carried out by the combined application of HMQC, HMBC, DEPT, COSY and NOESY experiments and named as iristectorone K.     

Performance of a closed recirculating system with foam separation, nitrification and denitrification units for intensive culture of eel: towards zero emission

The development of a closed recirculating aquaculture system that does not discharge effluents would reduce a large amount of pollutant load on aquatic bodies. In this study, eel were reared in a closed recirculating system, which consisted of a rearing tank, a foam separation unit, a nitrification unit and a denitrification unit. The foam separation unit has an inhalation-type aerator and supplies air bubbles to the rearing water. The growth of eel, which were fed a commercial diet, was satisfactory, with gross weight increases of up three times in 3 months. The survival rate under the congested experimental conditions was 91%. The foam separation unit maintained oxygen saturation in the rearing water at about 80%. Furthermore, fine colloidal substances were absorbed on the stable foam formed from eel mucus and were removed from the rearing water by foam separation. Ammonia oxidation and the removal of suspended solids were accomplished rapidly and simultaneously in the nitrification unit. The ammonia concentration and turbidity were kept at less than 1.2 mg of N per litre and 2.5 units, respectively. When the denitrification process was operated, nitrate that accumulated in the rearing water (151 mg of N per litre) was reduced to 40 mg of N per litre. The sludge was easily recovered from the nitrification and denitrification tanks, and the components were found suitable as compost. Based on these results, the intensive aquaculture of freshwater fish such as eel can be achieved using a closed recirculating system without emission.     

Stocking density and artificial habitat influence stock structure and yield from intensive nursery systems for mud crabs Scylla serrata (Forsskål 1775)

Intensive nursery systems are designed to culture mud crab postlarvae through a critical phase in preparation for stocking into growout systems. This study investigated the influence of stocking density and provision of artificial habitat on the yield of a cage culture system. For each of three batches of postlarvae, survival, growth and claw loss were assessed after each of three nursery phases ending at crab instars C1/C2, C4/C5 and C7/C8. Survival through the first phase was highly variable among batches with a maximum survival of 80% from megalops to a mean crab instar of 1.5. Stocking density between 625 and 2300 m⁻² did not influence survival or growth in this first phase. Stocking densities tested in phases 2 and 3 were 62.5, 125 and 250 m⁻². At the end of phases 2 and 3, there were five instar stages present, representing a more than 20‐fold size disparity within the populations. Survival became increasingly density‐sensitive following the first phase, with higher densities resulting in significantly lower survival (phase 2: 63% vs. 79%; phase 3: 57% vs. 64%). The addition of artificial habitat in the form of pleated netting significantly improved survival at all densities. The mean instar attained by the end of phase 2 was significantly larger at a lower stocking density and without artificial habitat. No significant effect of density or habitat on harvest size was detected in phase 3. The highest incidence of claw loss was 36% but was reduced by lowering stocking densities and addition of habitat. For intensive commercial production, yield can be significantly increased by addition of a simple net structure but rapidly decreases the longer crablets remain in the nursery.     

Absorption of calcium fumarate salts is equivalent to other calcium salts when measured in the rat model

Calcium absorption from fumarate salts (calcium fumarate and calcium malate fumarate), which have recently been considered for use as sources for food and beverage enrichment, was compared to that from calcium citrate malate, calcium citrate, and calcium carbonate. Salts were instrinsically labeled with 45Ca and orally administered to Sprague-Dawley rats. Fractional absorption of calcium from each salt was determined using the femur uptake model. Fractional absorption from the five salts (0.30-0.27) was not significantly different (p > 0.05). Thus, when measured in the rat model, calcium from calcium fumarate and calcium malate fumarate is absorbed equally well as compared to other salts, which are common calcium sources in many foods, beverages, and supplements.     

Populations of methanogenic bacteria in paddy field soil under double cropping conditions (rice-wheat)

The methanogenic populations able to use H₂–CO₂, methanol, and acetate were investigated in paddy field soil in situ under double cropping conditions [rice (Oryza sativa L.) as a summer crop under flooded conditions and wheat (Triticum aestivum L.) as an upland winter crop] over 2 years approximately bimonthly by the most probable number method. Three fields, one without fertilizer, one treated with inorganic fertilizer (mixed fertilizer including urea, ammonium phosphate, and potassium sulfate), and one treated with wheat straw plus inorganic fertilizer, were examined. The population of H₂–CO₂, methanol, and acetate utilizers in the paddy field soil at a depth of 1–6 cm was 10³–10⁴, 10⁴–10⁵, and 10⁴–10⁵ g^-1 dry soil, respectively. These values were almost constant during the 2 years irrespective of moisture regime (flooded or nonflooded), crop (rice or wheat), fertilizer treatment, and soil depth (0–1, 1–10, and 10–20 cm).     

What happens to earthworm casts in the soil? A field study of carbon and nitrogen dynamics in Neotropical savannahs

In the Oxisols of the eastern plains of Colombia, the large native anecic earthworm Martiodrilus sp. is an abundant ecosystem engineer producing long-lasting casts and burrows. Casts deposited in the soil by this species have been estimated at several tonnes per hectare per year. The physical and chemical processes occurring in these casts have never been studied. In this study, we compared the dynamics of water content (WC), total C (C_tot), and available N (N_avail) contents, and the distribution in size of aggregates in ageing below-ground casts of this species and in the bulk soil. In a native herbaceous savannah and a sown grass/legume pasture (Brachiaria humidicola, Arachis pintoi, Desmodium ovalifolium and Stylosanthes capitata), fresh surface casts were experimentally injected into artificial burrows of 1 cm Ø and 10 cm depth and sampled at different dates during a total period of 120 days. The injection procedure used resulted in a 34% decrease in WC of the casts from the sown pasture and reduced the mean mass diameter (MMD) of the aggregates of casts from the savannah by 19%. Other properties were not significantly affected by the procedure.For injected casts in both grasslands, MMD and C_tot were stable during cast ageing while WC and N_avail were initially at levels several times higher than the bulk soil and decreased to similar bulk soil values with ageing. The C_tot was twice and one third higher in casts compared with the bulk soil in the pasture and the savannah, respectively. Overall means for cast MMD (8.3 and 7.4 mm) were twice as high as those in the bulk soil (3.8 mm) in the savannah and the pasture, respectively. However, MMD was not significantly different between the casts and the bulk soil in two occasions in the pasture. Available nitrogen (N_avail) in injected casts was initially greater than bulk soil levels, reaching maximum levels just after injection (116 and 93 mg kg⁻¹) and remained significantly greater during 1-2 weeks, in the savannah and the pasture, respectively. In conclusion, the tonnes of casts deposited in the soil profile by Martiodrilus sp. each year are likely to contribute greatly to plant nutrition and to the regulation of the soil structure. For each anecic earthworm species, the ecological impact of its below-ground casts is likely to be as important as its surface casts.     

Morphological analysis of viral communities in the floodwater of a Japanese paddy field

Capsid size distributions of viral communities in the floodwater of a Japanese paddy field under a long-term fertilizer trial were surveyed during the rice cultivation period by using transmission electron microscopy. The capsid size distributions were monophasic, and the median values fell within the range of 50-70 nm. The quartile intervals were narrow from either 40-50 nm or 50-60 nm to either 60-70 nm or 70-80 nm for most samples. There was no clear seasonal variation in the capsid size distribution of viral communities. The difference in size distributions among different fertilizer plots was also not found. Viral communities in the floodwater were predominated by isometric icosahedral forms. Viruses with octahedral capsids and elongated ones were rare and sporadic in the floodwater.