A new measure of longitudinal connectivity for stream networks

Habitat connectivity is a central factor in shaping aquatic biological communities, but few tools exist to describe and quantify this attribute at a network scale in riverine systems. Here, we develop a new index to quantify longitudinal connectivity of river networks based on the expected probability of an organism being able to move freely between two random points of the network. We apply this index to two fish life histories and evaluate the effects of the number, passability, and placement of barriers on river network connectivity through the use of simulated dendritic ecological networks. We then extend the index to a real world dendritic river system in Newfoundland, Canada. Our results indicate that connectivity in river systems, as represented by our index, is most impacted by the first few barriers added to the system. This is in contrast to terrestrial systems, which are more resilient to low levels of connectivity. The results show a curvilinear relationship between barrier passability and structural connectivity. This suggests that an incremental improvement in passability would result in a greater improvement to river network connectivity for more permeable barriers than for less permeable barriers. Our analysis of the index in simulated and real river networks also showed that barrier placement played an important role in connectivity. Not surprisingly, barriers located near the river mouth have the greatest impact on fish with diadromous life histories while those located near the center of the river network have the most impact on fish with potadromous life histories. The proposed index is conceptually simple and sufficiently flexible to deal with variations in river structure and biological communities. The index will enable researchers to account for connectivity in habitat studies and will also allow resource managers to characterize watersheds, assess cumulative impacts of multiple barriers and determine priorities for restoration.     

Interaction of food resources and landscape structure in determining the probability of patch use by carnivores in fragmented landscapes

Studies on the distribution of mammalian carnivores in fragmented landscapes have focused mainly on structural aspects such as patch and landscape features; similarly, habitat connectivity is usually associated with landscape structure. The influence of food resources on carnivore patch use and the important effect on habitat connectivity have been overlooked. The aim of this study is to evaluate the relative importance of food resources on patch use patterns and to test if food availability can overcome structural constraints on patch use. We carried out a patch-use survey of two carnivores: the beech marten (Martes foina) and the badger (Meles meles) in a sample of 39 woodland patches in a fragmented landscape in central Italy. We used the logistic model to investigate the relative effects on carnivore distribution of patch, patch neighbourhood and landscape scale variables as well as the relative abundance of food resources. Our results show how carnivore movements in fragmented landscapes are determined not only by patch/landscape structure but also by the relative abundance of food resources. The important take-home message of our research is that, within certain structural limits (e.g. within certain limits of patch isolation), by modifying the relative amount of resources and their distribution, it is possible to increase suitability in smaller/relatively isolated patches. Conversely, however, there are certain thresholds above which an increase in resources will not achieve high probability of presence. Our findings have important and generalizable consequences for highly fragmented landscapes in areas where it may not be possible to increase patch sizes and/or reduce isolation so, for instance, forest regimes that will increase resource availability could be implemented. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Is landscape connectivity a dependent or independent variable?

With growing interest in landscape connectivity, it is timely to ask what research has been done and what re mains to be done. I surveyed papers investigating landscape connectivity from 1985 to 2000. From these papers, I determined if connectivity had been treated as an independent or dependent variable, what connectivity metrics were used, and if the study took an empirical or modeling approach to studying connectivity. Most studies treated connectivity as an independent variable, despite how little we know about how landscape structure and organism movement behaviour interact to determine landscape connectivity. Structural measures of connectivity were more common than functional measures, particularly if connectivity was treated as an independent variable. Though there was a good balance between modeling and empirical approaches overall – studies dealing with connectivity as a dependent, functional variable were mainly modeling studies. Based on the research achieved thus far, fu ture landscape connectivity research should focus on: (1) elucidating the relationship between landscape struc ture, organism movement behaviour, and landscape connectivity (e.g., treating connectivity as a dependent variable), (2) determining the relationships between different measures of connectivity, particularly structural and functional measures, and (3) empirically testing model predictions regarding landscape connectivity.This revised version was published online in May 2005 with corrections to the Cover Date.     

Landscape characteristics of <Emphasis Type="Italic">Rhizophora mangle</Emphasis> forests and propagule deposition in coastal environments of Florida (USA)

Field dispersal studies are seldom conducted at regional scales even though reliable information on mid-range dispersal distance is essential for models of colonization. The purpose of this study was to examine the potential distance of dispersal of Rhizophora mangle propagules by comparing deposition density with landscape characteristics of mangrove forests. Propagule density was estimated at various distances to mangrove sources (R. mangle) on beaches in southwestern Florida in both high-and low-energy environments, either facing open gulf waters vs. sheltered, respectively. Remote sensing and Geographic Information Systems were used to identify source forests and to determine their landscape characteristics (forest size and distance to deposition area) for the regression analyses. Our results indicated that increasing density of propagules stranded on beaches was related negatively to the distance of the deposition sites from the nearest stands of R. mangle and that deposition was greatly diminished 2 km or more from the source. Measures of fragmentation such as the area of the R. mangle forests were related to propagule deposition but only in low-energy environments. Our results suggest that geographic models involving the colonization of coastal mangrove systems should include dispersal dynamics at mid-range scales, i.e., for our purposes here, beyond the local scale of the forest and up to 5 km distant. Studies of mangrove propagule deposition at various spatial scales are key to understanding regeneration limitations in natural gaps and restoration areas. Therefore, our study of mid-range propagule dispersal has broad application to plant ecology, restoration, and modeling.     

Genetic analysis of landscape connectivity in tree populations

Genetic connectivity in plant populations is determined by gene movement within and among populations. When populations become genetically isolated, they are at risk of loss of genetic diversity that is critical to the long-term survival of populations. Anthropogenic landscape change and habitat fragmentation have become so pervasive that they may threaten the genetic connectivity of many plant species. The theoretical consequences of such changes are generally understood, but it is not immediately apparent how concerned we should be for real organisms, distributed across real landscapes. Our goals here are to describe how one can study gene movement of both pollen and seeds in the context of changing landscapes and to explain what we have learned so far. In the first part, we will cover methods of describing pollen movement and then review evidence for the impact of fragmentation in terms of both the level of pollen flow into populations and the genetic diversity of the resulting progeny. In the second part, we will describe methods for contemporary seed movement, and describe findings about gene flow and genetic diversity resulting from seed movement. Evidence for pollen flow suggests high connectivity, but it appears that seed dispersal into fragments may create genetic bottlenecks due to limited seed sources. Future work should address the interaction of pollen and seed flow and attention needs to be paid to both gene flow and the diversity of the incoming gene pool. Moreover, if future work is to model the impact of changing landscapes on propagule movement, with all of its ensuing consequences for genetic connectivity and demographic processes, we will need an effective integration of population genetics and landscape ecology.     

Effect of historic landscape change on the genetic structure of the bush-cricket Metrioptera roeseli

This study investigates the impact of past and present landscape structure on the current genetic structure of the bush-cricket Metrioptera roeseli (Orthoptera, Tettigoniidae) in a rural landscape in Germany. Assuming that land-use types, such as grassland, arable land and forest, as well as linear structures, mainly roads, differentially affect the connectivity of the bush-cricket's habitat and therefore migration and gene flow, we correlated landscape parameters between sampling locations as derived from GIS-maps with genetic similarities between individual bush-crickets as estimated by RAPD-PCR. Fifty bush-crickets were sampled with distances between sampling locations varying between 15 m and 2 km. Corresponding landscape configurations were recorded in 8 years between 1945 and 1998. Landscape configuration 50 years ago appeared to have influenced the present genetic structure of the bush-cricket (R ² = 0.18). Crossing roads and land use other than grassland along the transect between sampling locations tended to decrease genetic similarity, whereas grassland and parallel roads tended to increase genetic similarity between bush-crickets. Following shifts in land use during 1953–1973 the correlation between landscape and present genetic structure decreased gradually. Our study suggests that it needs time for the landscape to build a visible effect on the genetic structure of the bush-cricket population, and that this effect cannot be detected if the landscape changes faster than the genetic structure responds to it.     

On the seasonal effect of landscape structure on a bird species: the thorn-tailed rayadito in a relict forest in northern Chile

Forest bird species exhibit noticeable seasonal behavioral changes that might lead to contrasting effects of landscape pattern upon species abundance and performance. We assessed if the effect of patch and habitat attributes on the landscape use of thorn-tailed rayaditos (Aphrastura spinicauda), a forest bird in a relict patchy forest in northern Chile, varied temporally in association with changes in the behavior of individuals linked to breeding vs. non-breeding conditions. We also assessed the relationship between nest success and patch and habitat attributes, as nest success might be associated to the density rayaditos during the breeding season. We found that density of rayaditos was affected by patch size and functional connectivity but not by habitat structure and that the magnitude of the effect of patch size was greater during the non-breeding season, thus supporting the existence of a temporally variable effect of landscape pattern. Similarly, the nest success of rayaditos was positively affected by functional connectivity and negatively by structural connectivity. We hypothesize that these results emerged from the interaction among territorial behavior, resource limitation and predation risk. Despite the variable intensity of the effect of patch size upon density, however, this landscape attribute, in addition to connectivity, is essential for the persistence of rayaditos at this relict patchy forest landscapes.     

一个新的分子连接性指数(mZh)用于取代芳烃的定量构效关系研究

对K ier分子价连接性指数(mXv)作了进一步改进,提出了一种新原子点价ziδ,基于ziδ和分子图的邻接矩阵,建构新的分子连接性指数mZh(m=0,1),并研究mZh(m=0,1)与氯代苯的8种理化性质、卤代苯的正辛醇/水分配系数和水中溶解度、取代芳烃对水生生物的急性毒性以及取代苯甲酸的生物降解性之间的相关性。结果表明,mZh(m=0,1)对于取代芳烃具有良好的相关性,应用mZh(m=0,1)和相对分子质量MW可以预测取代芳烃的理化性质和生物活性。     

Burrow systems of endogeic earthworms: Effects of earthworm abundance and consequences for soil water infiltration

By creating burrows, earthworms influence the transfer properties of soils. The effects of endogeic species on soil transfer properties, however, are not yet well understood because these earthworms generally create burrows that are refilled by casts and have no preferential vertical orientation. Thirty soil cores were incubated for various periods (1–3 or 4 weeks) at different earthworm densities (70, 210, 345 or 480 individuals m⁻²). The cores were then scanned using X-ray tomography and the burrow systems were characterised by measuring the total burrow volume, bioturbation volume (refilled burrows and lateral compaction around the burrows), the number of branches, tortuosity and continuity (assessed by computing the number of burrows with a vertical extension greater than 15, 20 and 25% of the core). We also computed the mean geodesic distance, i.e. the mean distance from the bottom to the top of the core assuming that distances inside burrows are null. Rainfall simulations were carried out on 17 cores chosen to encompass the variations observed in the burrow systems. The water transfer efficiency of each core was estimated by measuring two parameters: breakthrough volume and the percentage of water transmitted after 1 h of rain. Burrow and bioturbation volume increased significantly and steadily with time and earthworm density. We estimated that on average Allolobophora chlorotica burrowed 22 cm per week. All other burrow system characteristics also increased with time and earthworm density except the mean geodesic distance, which decreased significantly. This suggests that intraspecific interactions had no significant effect on burrow system geometry. Univariate PLS regressions were used to understand which burrow system characteristics had the strongest influence on water transfer. These regressions showed that the mean geodesic distance was the most important parameter. This means that in addition to individual burrow characteristics, the spatial arrangement of the whole burrow system also had a major effect on transfer properties.