Interactive mapping of urban tree benefits using Google Fusion Tables and API technologies

Geographic Information Systems (GIS) and web-based GIS platforms are typically used by large organizations and government agencies for the purpose of data storage, query, analysis, and spatial data mapping. Google Fusion Tables, however, provides cloud-based computing services for data management and easy user collaboration through the Google Maps interface. Fusion Tables are oriented towards smaller organizations that previously were unable to publish data online due to limitations of database knowledge, high cost of start-up, and restrictions on implementation. In this research project, we assess the functionality and limitations of Fusion Tables and associated API as a spatial data management system by programming an interactive web-based mapping platform, the CityTrees.ca Project, designed to showcase the benefits of trees growing on the campus of Ryerson University, Toronto. Specifically, Fusion Tables functionality, such as data storage and manipulation, is used to build a query interface (both attribute and spatial) that permits users of CityTrees.ca to search for and map trees by species, diameter, height, and location. We found that Fusion Tables performed well as a storage medium for our campus tree data, which could easily be explored through our creation of a JavaScript-enabled query tool. Our project provides a unique roadmap for small to medium-sized urban forestry organizations and environmental non-profits seeking to create interactive mapping applications where data privacy and advanced spatial analysis are not fundamental.     

Palaeoecological insights for the conservation of aquatic ecosystems in dryland environments: A case study of the Verlorenvlei system,South Africa

Verlorenvlei, a dryland aquatic ecosystem in South Africa, has been identified as having enormous conservation importance. Although the system has Ramsar status and is widely regarded as being in ‘pristine' condition, neither statutory control nor any form of management is currently in existence. Based on the analysis of fossil pollen derived from the sediments of Verlorenvlei, a sequence of rapid changes within the riparian and aquatic vegetation is identified. Synchronous changes in the rate of sedimentation suggest a threefold increase in annual sediment deposition since the mid-18th century—the onset of colonial settlement. The pollen spectra prior to the arrival of colonial settlers suggest that abundant Poaceae (grasses) and rooted aquatic plants dominated the vegetation of the site. Radical changes in the pollen record become evident after the time of European colonization. Aquatic vegetation, including Gentianaceae (water lilies) and Potamogetonaceae, show a marked decrease while riparian vegetation, particularly reed elements such as Cyperaceae, Typhaceae and Juncaceae, are seen to increase progressively. Terrestrial pollen indicators reveal an expansion in the vegetation of classic disturbance indicators such as Asteraceae, Oxalidaceae and Scrophulariaceae. As the wetland has already endured rapid ecological adjustments in the face of colonial (and more recent) occupation of the broader landscape, it cannot be regarded as being in a ‘pristine’ state. Indeed, Verlorenvlei is interpreted as having reached a state of ‘transitional’ ecological equilibrium in which it continues to endure a number of rapid ecological changes; nonetheless, it is still worthy of conservation and management, not least because of its role as a strategic wetland in a dryland environment. Failing the timely implementation of remedial action in the form of an integrated conservation and management plan, Verlorenvlei appears destined to become irreversibly altered. Dryland aquatic ecosystems are vital aquatic resources in so called ‘Third World’ regions of the world yet, paradoxically, scientific research on, and the conservation of, these environments in the Southern Hemisphere are rare by comparison to wetland environments in the northern temperate zones. Although many dryland aquatic systems may already be altered, most are worthy of urgent management and conservation action, bearing in mind the fundamental question: ‘What is it that we wish to conserve?’. A number of recommendations for the management of dryland aquatic ecosystems such as Verlorenvlei are listed.     

`Ocean triads' in the Mediterranean Sea: physical mechanisms potentially structuring reproductive habitat suitability (with example application to European anchovy, Engraulis encrasicolus)

Summaries of maritime weather reports and mean seasonal satellite-sensed ocean colour distributions for the Mediterranean Sea are used to identify characteristic configurations of physical mechanisms promoting (i) nutrient enrichment, (ii) concentration of larval food distributions, and (iii) local retention of eggs and larvae. Five subbasin scale `ocean triads', hypothesized to be particularly favourable groupings, are identified in the Aegean Sea, the Gulf of Lions and nearby Catalan Coast, the Alboran Sea, the Straits of Sicily/Tunisian Coast, and the Adriatic Sea. These are examined in relation to available knowledge of anchovy spawning grounds. All areas are characterized by patterns of linked wind-driven Ekman upwelling and downwelling. All areas except the Straits of Sicily are found to have inputs of less saline surface waters offering raised nutrient concentrations, enhanced upper layer stability, and frontal density contrasts, and to have areas where the characteristic rate of turbulent mixing energy input by the wind fall below a reference intensity level. All areas, except the Sicilian Channel/Tunisian Coast, also contain abundant locally reproducing anchovy populations.     

Machine learning highlights the importance of primary and secondary production in determining habitat for marine fish and macroinvertebrates

1. Species distribution models for marine organisms are increasingly used for a range of applications, including spatial planning, conservation, and fisheries management. These models have been constructed using a variety of mathematical forms and drawing on both physical and biological independent variables; however, what might be called first-generation models have mainly followed the form of linear models, or smoothing splines, informed by data collected in the context of fish surveys.
2. The performance of different classes of variables were tested in a series of species occurrence models built with machine learning methods, specifically evaluating the potential contribution of lower trophic level data. Random forest models were fitted based on the classification of the absence/presence for fish and macroinvertebrates surveyed on the US Northeast Continental Shelf.
3. The potential variables included physical, primary production, secondary production, and terrain variables. For accepted model fits, six variable importance measures were computed, which collectively showed that physical and secondary production variables make the greatest contribution across all models. In contrast, terrain variables made the least contribution to these models.
4. Multivariable analyses that account for all performance measures reinforce the role of water depth and temperature in defining species presence and absence; however, chlorophyll concentration and some specific zooplankton taxa, such as Metridia lucens and Paracalanus parvus, also make important contributions with strong seasonal variations.
5. Our results suggest that lower trophic level variables, if available, are valuable in the creation of species distribution models for marine organisms.

     

Diagnosis and management of small-scale fisheries in developing countries

Small‐scale fisheries (SSF) make important but undervalued contributions to the economies of some of the world’s poorest countries. They also provide much of the animal protein needed by societies in which food security remains a pressing issue. Assessment and management of these fisheries is usually inadequate or absent and they continue to fall short of their potential as engines for development and social change. In this study, we bring together existing theory and methods to suggest a general scheme for diagnosing and managing SSF. This approach can be adapted to accommodate the diversity of these fisheries in the developing world. Many threats and solutions to the problems that beset SSF come from outside the domain of the fishery. Significant improvements in prospects for fisheries will require major changes in societal priorities and values, with consequent improvements in policy and governance. Changes in development policy and science reflect these imperatives but there remains a need for intra‐sectoral management that builds resilience and reduces vulnerability to those forces beyond the influence of small‐scale fishers.     

Carbon sequestration potential of five tree species in a 25-year-old temperate tree-based intercropping system in southern Ontario,Canada

Carbon (C) sequestration potential was quantified for five tree species, commonly used in tree-based intercropping (TBI) and for conventional agricultural systems in southern Ontario, Canada. In the 25-year-old TBI system, hybrid poplar (Populus deltoides × Populus nigra clone DN-177), Norway spruce (Picae abies), red oak (Quercus rubra), black walnut (Juglans nigra), and white cedar (Thuja occidentalis) were intercropped with soybean (Glycine max). In the conventional agricultural system, soybean was grown as a sole crop. Above- and belowground tree C Content, soil organic C, soil respiration, litterfall and litter decomposition were quantified for each tree species in each system. Total C pools for hybrid poplar, white cedar, red oak, black walnut, Norway spruce and a soybean sole-cropping system were 113.4, 99.4, 99.2, 91.5, 91.3, and 71.1 t C ha^?1, respectively at a tree density of 111 trees ha^?1, including mean tree C content and soil organic C stocks. Net C flux for hybrid poplar, white cedar, red oak, black walnut, Norway spruce and soybean sole-crop were 2.1, 1.4, 0.8, 1.8, 1.6 and ?1.2 t C ha^?1 year^?1, respectively. Results presented suggest greater atmospheric CO₂ sequestration potential for all five tree species when compared to a conventional agricultural system.     

Estimating coarse root biomass with ground penetrating radar in a tree-based intercropping system

Conventional measurements of tree root biomass in tree-based intercropping (TBI) systems can be inadequate in capturing the heterogeneity of rooting patterns or can be highly destructive and non-repeatable. In this study, we estimated coarse root biomass using ground penetrating radar (GPR) of 25-year-old trees inclusive of five species (Populus deltoides × nigra clone DN-177, Juglans nigra L., Quercus rubra L., Picea abies L. Karst, and Thuja occidentalis L.) at a TBI site in Southern Ontario, Canada. Subsurface images generated by GPR were collected in grids (4.5 × 4.5 m) centred on tree stems. The predictive relationship developed between GPR signal response and root biomass was corrected for species effects prior to tree-scale estimates of belowground biomass. Accuracy of the tree-scale estimates was assessed by comparing coarse root biomass measured from complete excavations of the corresponding tree. The mean coarse root biomass estimated from GPR analysis was 54.1 ± 8.7 kg tree^?1 (mean ± S.E.; n = 12), within 1 % of the mean coarse root biomass measured from excavation. Overall there was a root mean square error of 14.4 kg between measured and estimated biomass with no detectable bias despite variable conditions within the in-field and multi-species study. Root system C storage by species, calculated with species-specific root carbon concentrations, is estimated at 5.4 ± 0.7–34.8 ± 6.9 kg C tree^?1 at this site. GPR is an effective tool for non-destructively predicting coarse root biomass in multi-species environments such as temperate TBI systems.     

Allelic losses and gains during translocations of a high conservation value fish,Coregonus lavaretus

1. The use of translocations to establish new or ‘refuge’ populations for species with high conservation value is controversial but widely used in conservation management. One of the risks of this approach is that an establishing population does not adequately capture the genetic diversity of the donor gene pool. This effect, rarely examined, is tested here.
2. In this study the genetic consequences of two conservation translocations after five generations (16 years) of the European whitefish, Coregonus lavaretus, were quantified. Both translocations were made using almost the same genetic groups and thus represent a partly replicated natural study.
3. Analysis of 12 informative microsatellites showed that expected heterozygosity, the mean number of alleles per locus and allelic richness did not differ between donor and translocated populations. There was also no loss of heterozygosity in the translocated populations, nor deviations from Hardy–Weinberg equilibrium expectations, nor signs of linkage disequilibrium.
4. All populations were genetically differentiated but pairwise F_ST values were low, indicating that the magnitude of divergence was small.
5. There was no evidence of inbreeding but there were significant differences in private allelic richness between donor and translocated populations. Of 50 alleles found in the donor population, 16% of the rarer alleles were lost in one translocated population and 8% in the other.
6. Allele loss without a reduction in heterozygosity strongly points to stochastic drift effects having occurred following translocation. The evidence indicates that alleles that were not detected in the donor population have arisen de novo in the translocated populations.
7. It is concluded that conservation translocations comprising even a modest number of propagules can successfully capture a high proportion of genetic variation of the host population, and that reduced genetic variation in the translocated population may be mitigated by the emergence of new variation over short time periods.

     

Novel insights into the marine phase and river fidelity of anadromous twaite shad Alosa fallax in the UK and Ireland

1. Most research on anadromous fishes has been invested in their freshwater life‐phases, resulting in a relatively sparse understanding of their spatial ecology during marine life‐phases. However, understanding the marine dispersal of anadromous fishes is essential to identify threats and to implement conservation measures that fully encompass their lifecycle.
2. The twaite shad Alosa fallax is an anadromous fish increasingly imperilled across its range due to pollution, harvesting, and impediments to freshwater migration, but little is known about its distribution and movements during its marine life‐phase. Here, the application of acoustic telemetry provided novel insights into the coastal dispersal of twaite shad in the UK and Ireland during 2018–2019, and the freshwater entry of individuals during the 2019 spawning season.
3. Of 73 twaite shad acoustic‐tagged during their upstream migration in the River Severn in May 2018, 58 emigrated from the river. Twelve were subsequently detected 200 km to the south‐west at the Taw–Torridge Estuary between July 2018 and April 2019, where estuarine movements up to 5.8 km inland occurred in summer, winter, and spring. One was subsequently detected in the Munster Blackwater Estuary (Ireland) and then in the River Severn, indicating a minimum movement distance of 950 km. Thirty‐four (59%) of the emigrating individuals from 2018 re‐entered fresh water in the rivers Severn (n = 33) and Wye (n = 2) in April and May 2019.
4. These results suggest year‐round use of estuarine and nearshore habitats by at least a subset of the twaite shad population during their marine phase, providing evidence of potential range overlap between populations that spawn in different areas in the UK and Ireland, which may be facilitated by substantial dispersal. The results also highlight the potential of telemetry for estimating freshwater and marine mortality, and the benefits of sharing detection data across networks.