Chlorogenic acid,a metabolite identified by untargeted metabolome analysis in resistant tomatoes,inhibits the colonization by Alternaria alternata by inhibiting alternariol biosynthesis

Tomato fruits can be contaminated by saprophytic strains of Alternaria alternata which is the reason for the frequent occurrence of Alternaria toxins like alternariol, alternariol monomethylether or tenuazonic acid in these types of products. It was shown earlier that alternariol is a colonization factor for tomatoes. In the current analysis two different tomato genotypes were analysed by untargeted comprehensive two-dimensional gas chromatography mass spectrometry (GC×GC-MS). This analysis revealed clear differences in the metabolic profiles which were paralleled by differences in resistance towards Alternaria colonization. One of the genotypes was more resistant against A. alternata infection and contained high amounts of chlorogenic acid in contrast to the other genotype which was sensitive against infection. In in vitro analysis, chlorogenic acid reduced alternariol biosynthesis during the first days of growth of A. alternata. Expression analysis of the alternariol polyketide synthase gene, a key gene in the biosynthesis of alternariol, also revealed a temporal reduction in its expression in the first phases of growth. However by chromatographic analysis it could be demonstrated that chlorogenic acid was degraded over time. This degradation leads to a relief of inhibition resulting in an only temporal inhibition of alternariol biosynthesis. In vivo colonization experiments revealed that chlorogenic acid reduces colonization of tomatoes by A. alternata in a concentration dependent manner, which however is partly counteracted by the addition of alterariol.     

Application of mycorrhizal roots improves growth of tropical tree seedlings in the nursery: a step towards reforestation with native species in the Andes of Ecuador

Most tree species in tropical mountain rain forests are naturally associated with arbuscular mycorrhizal fungi. Previous studies in southern Ecuador of 115 tree species revealed that only three species were not associated with arbuscular mycorrhizal fungi. Seedlings of tropical tree species raised in the nursery may need to be associated with arbuscular mycorrhizal fungi to survive transplantation shock in higher numbers. Methods for establishing plantations with native tree species are not yet established for Ecuador. Thus, we investigated the feasibility of using mycorrhizal roots of seedlings of Inga acreana, Tabebuia chrysantha, Cedrela montana and Heliocarpus americanus that had trapped mycorrhizal fungi from forest humus in the nursery to inoculate C. montana and H. americanus with native arbuscular mycorrhizal fungi. Inoculation with either a mixture of mycorrhizal roots from the four species or only with mycorrhizal roots from the same tree species were compared with effects of moderate fertilization. Assessment of plant growth and mycorrhizal status of 6-months-old Cedrela montana and Heliocarpus americanus revealed an improvement in growth and diverse associated fungi through mycorrhizal root inoculation in comparison with moderate fertilization. Moderate fertilization did not suppress mycorrhization.     

Detection of head blight (Fusarium ssp.) in winter wheat by color and multispectral image analyses

The use of camera vision to automatically detect head blight (scab) on wheat ears could provide information about the severity of this dangerous disease and help meet future food traceability requirements. Fusarium spp. is dangerous for both human and animal consumption and the ability to monitor symptom location and severity before the harvested product is further processed or stored could help determine whether the grain is fit for human/animal consumption, for bio-conservation, or is completely unusable.To generate various infection levels, field trials were conducted in 2008 and 2009 using wheat varieties with differing levels of susceptibility to the disease; plots were artificially infected with a spore suspension. A color (red, green, and blue) and a multispectral (red, infrared) camera system with real-time image analysis software were developed and compared to detect disease symptoms in the plots.The chlorophyll defect of the infected wheat ears was classified against the image background by setting binarization thresholds. The result was a black and white image. Single pixels or tiny clusters of pixels not belonging to the symptoms were eliminated by setting an area threshold. For both systems, a linear correlation was found between the camera and the visually detected disease levels of the wheat ears in the plots.In the non-infected control plots without disease symptoms, the multispectral system accurately measured “no disease” even though the digital color system detected too much infection (i.e., a false positive). The multispectral system showed a superior calibration capacity. While the color system had to calibrate for each variety, the multispectral system used only one calibration step before starting the measurements.     

The effect of elevated temperatures on food conversion efficiencies of Coccinella septempunctata and Harmonia axyridis young adults feeding on Sitobion avenae

Journal of Plant Diseases and Protection - An analysis of existing data gained in a set of climate chamber experiments was conducted to compare food conversion efficiencies of young Coccinella...     

Changes in sugar and starch concentrations in parsnip (Pastinaca sativa L.) during root growth and development and in cold storage

Summary

Low-temperature sweetening of parsnip (Pastinaca sativa L.) roots, which may occur both pre-harvest and post-harvest, is a well-known phenomenon, but is poorly understood. ‘White King’ parsnip roots were analysed over two seasons (2008 and 2009) during field growth and over six months cold storage at 1ºC for their dry matter content, as well as their starch, sucrose, glucose, fructose, and malto-oligosaccharide (MOS) concentrations and for their changes in amylolytic enzyme activities (2009 only). In 2008, when the air temperature fell below 5ºC for 12 d in the last 8 weeks before harvest, the concentration of starch decreased significantly (P ≤ 0.05) and the concentration of total sugar increased significantly. In 2009, when temperatures did not fall below 5°C during the last 8 weeks before harvest, the concentrations of starch (339 + 17 mg g^–1 DW) and total sugars (168 + 12 mg g^–1 DW) did not change significantly. However, in both years, during 24 weeks in cold storage at 1ºC, starch levels were almost completely depleted, whereas sucrose concentrations and, to a lesser extent, MOS concentrations increased at least two-fold. Glucose and fructose concentrations also increased significantly during 24 weeks in cold storage, but to a much lower level than sucrose or MOS. Total amylolytic activity and α-amylase activity doubled during the first 8 weeks in cold storage, whereas β-amylase activity did not change significantly. As products of α-amylase activity, changes in MOS concentration paralleled the changes in α-amylase activity. The accumulation of sucrose and MOS may raise the culinary quality of cold-stored parsnip.     

Uncertainty in the spatial prediction of soil texture: Comparison of regression tree and Random Forest models

Within the southern Ecuadorian Andes, landslides have an impact on landscape development. Landslide risk estimation as well as hydrological modelling requires physical soil data. Statistical models were adapted to predict the spatial distribution of soil texture from terrain parameters. For this purpose, 56 soil profiles were analysed horizon-wise by pipette and laser method. Results by pipette compared to laser method showed the expected shift to higher silt and lower clay contents. Linear regression equations were adapted. The performance of regression tree (RT) and Random Forest (RF) models was compared by hundredfold model runs on random Jackknife partitions. Digital soil maps of sand, silt and clay percentage mean and standard deviation indicate model variability and prediction uncertainty.RF models performed better than RT models. All terrain factors considered in the analysis influenced soil texture of the surface horizon, but altitude a.s.l. was assigned the highest variable importance during model construction. Shallow subsurface flow is considered responsible for increasing sand/clay ratios with increasing altitude, on steep slopes and with overland flow distance to the channel network by removing clay particles downslope. Deeper soil layers are not influenced by this process and therefore, did not show the same texture properties. However, the influence of parent material and landslides on the spatial distribution of soil texture cannot be neglected. Model performance, most probably, could be improved by a bigger dataset.     

Shoot cadmium concentration of soil‐grown plants as related to their root properties

Cadmium (Cd) is toxic to plants, animals, and humans. However, different plant species growing on the same soil may have very different shoot Cd concentrations depending on properties such as size of the root system, Cd net influx, shoot‐growth rate, Cd translocation from root to shoot, and the ability to affect Cd availability in the soil. To investigate possible reasons for different shoot Cd concentrations maize, sunflower, flax, and spinach were grown on an acid sandy soil (pH<$>_{{\rm{(CaCl}}_{\rm{2}} {\rm)}<$> 4.5, and C_org 2.8%) in a growth chamber with Cd additions as Cd(NO₃)₂ of none, 14, and 40 μmol (kg soil)^–1 resulting in Cd soil‐solution concentrations of 0.04, 0.68, and 2.5 μM. Only the high Cd addition caused a significant growth reduction of flax and spinach. The shoot Cd concentration was up to 30 times higher in spinach than in maize; the other species were intermediate. Of the plant properties studied only the variation of the Cd net influx explained the differences in shoot Cd concentrations. This was due to a decreased (maize, sunflower) or increased (flax) Cd concentration in soil solution or more effective uptake kinetics (spinach).     

Relationship between leaf apoplast pH and iron chlorosis of sunflower (Helianthus annuus L.)

A hypothesis has been presented and tested that bicarbonate (HCO₃) and nitrate (NO₃) are the most important anions inducing iron (Fe) chlorosis because these anions increase the pH of leaf apoplast which in turn depresses ferric‐iron [Fe(III]) reduction, and hence, the uptake of Fe into the symplasm. Experiments with young sunflower (Helianthus annuus) plants showed that nutrition with NO₃ as the sole nitrogen (N) source induced chlorosis whereas ammonium nitrate (NH₄NO₃) did not. Monohydrogen carbonate (bicarbonate) also favoured the development of chlorosis. The degree of chlorosis was not related to the Fe concentration in the leaves. Both anion species, NO₃ and HCO₃, increased the pH of the leaf apoplast which was measured by means of the fluorescence dye 5‐carboxyfluorescein. A highly significant negative correlation between leaf apoplast pH and chlorophyll concentration in the leaves (r = ‐0.97) was found. Ferric‐Fe reduction in the apoplast—measured by means of ferrocene—provided evidence that a low leaf apoplast pH, obtained with ammonium (NH₄) supply, favoured the reduction of Fe(III) as compared with a higher leaf apoplast pH obtained with NO₃ supply. These results support the hypothesis tested.     

Natural abundance of 18O of sugar biomarkers in topsoils along a climate transect over the Central Scandinavian Mountains,Norway

Precipitation and topsoil samples from a climate transect over the Scandinavian Mountains, Norway, were analyzed for bulk and compound‐specific δ¹⁸O values. The natural abundance of ¹⁸O in the plant‐derived hemicellulose biomarkers arabinose and xylose correlates positively with δ¹⁸O of bulk soil, but not with δ¹⁸O of precipitation. This suggests that other factors than δ¹⁸O_prec, such as evaporative ¹⁸O enrichment of leaf water, exert a strong influence on the natural abundance of ¹⁸O in soils.