Assessing the Quality of Seedlings in Small-scale Nurseries in the Highlands of Cameroon: The Use of Growth Characteristics and Quality Thresholds as Indicators

In developing countries seedlings are often produced in small-scale nurseries as a means to raise tree planting materials and, provided they are of high quality, these can form the basis for successful forest plantation initiatives. This study uses morphological characteristics to assess the quality of seedlings of three tree species (Persea americana, Cola acuminata and Dacryodes edulis) in the Western Highlands of Cameroon. The growth characteristics and quality indicators of seedlings produced in two nursery categories were compared—three nurseries collaborating with the tree domestication program implemented by the World Agroforestry Centre (Category 1) and three nurseries collaborating with government and non-governmental projects (Category 2). Seedlings produced in nurseries in the first nursery category were found to be uniform in terms of growth characteristics and quality indicators. In the second category, there were relatively higher seedling proportions having measured parameters out of threshold standards for root to shoot ratio and for sturdiness quotient. Significant differences between nursery categories (at α = 0.05) were detected in root collar diameter of C. acuminata and D. edulis and in shoot dry weight of D. edulis. These differences could be attributed to better nursery management as a results of training and technical backstopping received by nursery operators in Category 1. The level of experience of nursery operators in both categories was found to be insufficient and greater exposure to skills and knowledge could enhance the production of high quality seedlings.     

Type, density, and location of immune cells within human colorectal tumors predict clinical outcome

The role of the adaptive immune response in controlling the growth and recurrence of human tumors has been controversial. We characterized the tumor-infiltrating immune cells in large cohorts of human colorectal cancers by gene expression profiling and in situ immunohistochemical staining. Collectively, the immunological data (the type, density, and location of immune cells within the tumor samples) were found to be a better predictor of patient survival than the histopathological methods currently used to stage colorectal cancer. The results were validated in two additional patient populations. These data support the hypothesis that the adaptive immune response influences the behavior of human tumors. In situ analysis of tumor-infiltrating immune cells may therefore be a valuable prognostic tool in the treatment of colorectal cancer and possibly other malignancies.     

The inherent variability of water stress indicators in apple, nectarine and pear orchards, and the validity of a leaf-selection procedure for water potential measurements

The following two topics were examined: (1) The variability in the measurement of leaf water potential (LWP), stem water potential (SWP), maximum daily trunk shrinkage (MDS), and soil water tension (SWT) in apple, nectarine and pear orchards; and (2) The validity of a leaf-selection procedure for SWP measurements in commercial apple orchards. 27 trees were selected in an apple orchard, 27 in a nectarine orchard, and 30 in a pear orchard. The trees were close to each other. The measurements comprised of: midday SWP in apple, nectarine and pear; midday LWP in apple; MDS in apple and nectarine; and SWT in pear. The mean and standard errors (SEs) of each water status indicator in each species were calculated for an increasing sample size. The sample sizes required for stable averages were: SWP – 4, 5, and 8 trees for apple, nectarine and pear, respectively; MDS – 17 and 16 trees for apple and nectarine, respectively; SWT – 21 for pear trees. The relative SEs (i.e. percent of population mean) were 2.4, 6.1 and 10.1% in SWP/LWP, MDS and SWT, respectively. Possible explanations for the differing variability of the various water status indicators are discussed. The results show that smaller samples were sufficient to represent SWP and LWP properly than what was required for MDS and SWT. 9 commercial apple plots were selected and about 25 randomly selected leaves were used for midday SWP measurements in each plot (i.e. experimental sets). About 5 leaves on closely adjacent “representative” trees were selected in each of the commercial plots (i.e. commercial sets) and midday SWP was measured. The average difference in SWP between the experimental and the commercial sets was –0.127 MPa. The choice of closely adjacent trees increased the deviation from the experimental sets. The use of a reasonable sample size (n=7) may enable midday SWP to be measured within ±0.15 MPa in most commercial orchards.     

Effect of Long-Term Effluent Recharge on Phosphate Sorption by Soils in a Wastewater Reclamation Plant

The Soreq recharge basins, used for wastewater reclamation employing the Soil-Aquifer Treatment (SAT) system, have been recharged, on average, by about 1,800 m depth of secondary effluent during their operation period of ～25 years. An estimated amount of ～6 kg P m^?2 was added to the soil/sediment column during this period. The objective of this study was to compare phosphorous sorption characteristics of representative pristine soils in the Soreq recharge site to those of the basin soils sampled after a long period of effluent recharge. Batch isotherm experiments were conducted: samples of one g of soil were equilibrated with 25 mL of 0.02 M NaCl solution containing 0–3.2 mM of phosphate for 7 days at 25± 1^°C and P sorption was measured. Long-term effluent recharge significantly decreased the maximum P sorption capacity of the top sandy soil (0.15–0.3 m) and only very slightly decreased maximum P isotherm capacity of the deep clayey-sand soil (10–10.5 m). The retention of P in the basin sandy soil primarily involved sorption and surface precipitation reactions on soil carbonates. In the basin clayey-sand soil, P was retained by its sorption on surfaces of Fe, Al, Mn oxide/hydroxides and clay minerals. Long-term effluent recharge increased EPC₀, (the equilibrium P concentration in solution at which there is no sorption or desorption to or from the soil under the given conditions), of the basin soils compared to the pristine soils. Due to loading of the top horizons with P by prolonged recharge and reduced P concentration in the effluent, EPC₀ of the basin sandy soil is now equal to the average P concentration of the recharged effluents. If effluent P concentration will decrease further, the top sandy soil will become a source of P to the reclaimed water, rather than a sink. The clayey-sand layers and lenses in the vadose zone of the SAT system of the Soreq site offer a large capacity for P adsorption. With gradual leaching of carbonate minerals and synthesis of secondary clay minerals, driven by long-term effluent recharge, P retention mechanisms in the basin soil may be changed, but this process would be extremely slow.     

Phenotypic diversity of barley powdery mildew resistance sources

One hundred and twenty-one of 123 previously detected new sources of wild barley (Hordeum vulgare ssp. spontaneum) resistant to powdery mildew (Blumeria graminis f. sp. hordei), and originating from Mediterranean area, and 20 standards were tested at the seedling stage for reaction to 38 selected Israeli powdery mildew isolates. The obtained resistance spectrum (a set of resistant and susceptible reactions) of each accession was divided into triplets and converted to octal numbers. This concentrates information on the resistance phenotype of each accession and makes their comparison much easier. One hundred and thirty-four different resistance spectra were determined. No compatible reaction was found in standards possessing genes mlo and Mlhb2 and in the accession PI 466634. The results demonstrate large diversity in new resistance sources, their distinction from the sources described till now as well as diversity in powdery mildew resistance of wild barley in the Mediterranean area. The results facilitate more effective further studies of such a large set of new resistance sources, and contribute to speeding up their use in barley breeding.     

Coupling between neuronal firing, field potentials, and FMRI in human auditory cortex

Functional magnetic resonance imaging (fMRI) is an important tool for investigating human brain function, but the relationship between the hemodynamically based fMRI signals in the human brain and the underlying neuronal activity is unclear. We recorded single unit activity and local field potentials in auditory cortex of two neurosurgical patients and compared them with the fMRI signals of 11 healthy subjects during presentation of an identical movie segment. The predicted fMRI signals derived from single units and the measured fMRI signals from auditory cortex showed a highly significant correlation (r = 0.75, P < 10(-47)). Thus, fMRI signals can provide a reliable measure of the firing rate of human cortical neurons.     

Evaluating the merits of climate smart technologies under smallholder agriculture in Malawi

The merits of three climate smart agriculture (CSA) technologies implemented by farmers were assessed in Machinga district of Malawi with respect to their soil quality and maize yield effects. Data were collected from farms implementing the three CSA technologies, namely conservation agriculture (CA), maize–pigeonpea (Maize-PP) intercrops and a local organic and inorganic soil amendment known as Mbeya fertilization (Mbeya-fert), from 2018 to 2019. With respect to resilience and adaptation, particulate organic matter, soil organic carbon (SOC), N, P, K, Ca and Mg all significantly improved while bulk densities were lowered under the three CSA systems. Higher annual biomass inputs and improved water infiltration from the Maize-PP intercrops were observed. With respect to productivity, CA and Mbeya-fert improved maize yields by 51 and 19%, respectively, compared to conventional farmer practices. With regard to climate change mitigation, increases in measured SOC in the top 20 cm depth compared to the conventional farmer practices amounted to 6.5, 12 and 10.5 t C ha⁻¹ for CA, Mbeya-fert, and Maize-PP intercrops, respectively, over a period of 2–6 years. This suggests higher potential for carbon sequestration from CSA technologies. Furthermore, use of drought tolerant varieties, timely weeding and optimum plant populations, increased productivity. Improved gross margins from CSA practices were also apparent. Thus, employing these CSA technologies could enable farmers to be more resilient, productive and adapt better to climate change shocks leading to improved food security and livelihoods.     

Evidence for mate fidelity in the gray seal

Colonially breeding gray seals are polygynous. Males are larger than females, compete with each other for position among aggregated females, and contribute no parental care. Genetic analysis of pups born on the island of North Rona, Scotland, reveals large numbers of full siblings, although dominant males father disproportionately few of these. This result cannot be explained by mating patterns based solely on male dominance and the spatio-temporal organization of the breeding colony. Instead, many full siblings must result from choices favoring previous parental combinations. Thus, polygyny and partner fidelity appear to operate simultaneously in this breeding colony.     

A role for the protease falcipain 1 in host cell invasion by the human malaria parasite

Cysteine proteases of Plasmodium falciparum are required for survival of the malaria parasite, yet their specific cellular functions remain unclear. We used a chemical proteomic screen with a small-molecule probe to characterize the predominant cysteine proteases throughout the parasite life cycle. Only one protease, falcipain 1, was active during the invasive merozoite stage. Falcipain 1-specific inhibitors, identified by screening of chemical libraries, blocked parasite invasion of host erythrocytes, yet had no effect on normal parasite processes such as hemoglobin degradation. These results demonstrate a specific role for falcipain 1 in host cell invasion and establish a potential new target for antimalarial therapeutics.     

Human leukocyte antigenic specificity HL-A3: frequency of occurrence

Reactivity of antiserum against HL-A3, a human leukocyte and tissue antigenic specificity, depends upon a property of the lymphocyte as well as on the potency of the serum. Many reactions of HL-A3 antiserums can only be recognized through absorption or by a two-stage test not in general use. Interpretations of donor-recipient compatibility and of the constitution of HL-A alleles affected by these findings.