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1.

Additive, Main-effects and Multiplicative Interaction (AMMI) models are being widely used for analysing main-effects and genotypeby-environment (G E) interactions in multilocation variety trials. This paperpresents an AMMI analysis ofthe reaction to rice blast( Pyricularia oryzae ) by 25 rice genotypes grown in unreplicated trials in six locations. The object is to gain insight into G E in rice blast, and identify genotypes with high and stable resistance to the disease. Our results showed that contributions to treatment main-effects were: genotype (33%), environment (29%), and G E (38%). Analysis of the interaction revealed decreasing magnitude of contributions to the G E sum of squares in the order: interaction principal component axis 1 (IPCA1) = 39%, IPCA2 = 22%, IPCA3 = 20%, and IPCA4 = 12%. Correlation analysis related IPCA3 to total rainfall in the first month of experimentation. Considerable diversity was observed among the environments and in the reaction of the differential entries to blast disease. An overlap between two differentials suggest one could replace the other. Four improved upland varieties (IRAT13, LAC23, ITA257, and ITA235) and three improved lowland plant types (ITA116, ITA118, and ITA120) showed high and stable resistance to blast. Compared with their parents, this suggests progress in varietal improvement against blast in Africa. The paper discusses some applications of AMMI in the analysis and interpretation of multilocation blast screening data.  相似文献   

2.
Nine cassava genotypes were grown for three years at six sites representing three agro-ecological zones in Nigeria to study their reaction to cassava bacterial blight (CBB), investigate genotype × environment (G × E) interaction patterns for their reaction to CBB, and to identify genotypes with stability to the disease, using the additive main effects and multiplicative interaction (AMMI) statistical model. Environments, genotypes and G × E interactions accounted for 71.8%, 12.0% and 16.2% of the treatment sums of squares (SS), and were highly significant (P<0.0001) for the disease, indicating that genotypes responded differentially to CBB infection across environments. Clones 30555, 91934, U/41044, and 4(2)1425 showed the least CBB disease ratings. Other clones showed erratic and fluctuating reactions to CBB from environment to environment and were thus considered unstable to the disease. CBB was most severe in 1989 (with a mean score of 2.46) and least so in 1990 (with a score of 2.06). The sites with the most disease were Ibadan, Ilorin and Ubiaja (1989), Ibadan and Ubiaja (1990) and Mokwa (1991). Because of the favourable conditions for disease development at those sites, they could be appropriate for screening cassava genotypes for CBB resistance. The AMMI model selected AMMI1 as the best predictor for CBB because it had the smallest actual root mean square prediction difference (0.37646), and explained 90.7% of the G × E interaction for CBB. The AMMI model was successful in selecting the genotypes 30555, U/41044 and 4(2)1425 and the environments Ibadan 1989, Ilorin 1989 and Onne 1990 with stability of reaction to the disease.  相似文献   

3.
Ten institutions in nine countries joined together to test the stability of resistance of 14 potato genotypes to the oomycete pathogen Phytophthora infestans in three separate trials. Seven of the genotypes were tested in one trial involving seven locations, and all 14 were tested in two subsequent trials, each involving eight locations. Stability of resistance was tested with nonparametric tests and with an additive main effects and multiplicative interaction (AMMI) model. Overall, resistance to P. infestans was robust; resistant genotypes were consistently resistant in all locations and trials. The nonparametric analysis indicated that specific genotypes were basically stable across sites for resistance. In trial 3, the Z statistic for overall stability was significant at 0·05%, indicating a significant level of interaction across the trial, but there were no significant interactions for specific genotypes in this trial. The genotype by environment (G × E) effect of the AMMI model was highly significant in both trials, but the mean square of G × E was less than 10% of the genotype effect in each trial. The first two principal components (PCA1 and PCA2) of the AMMI analyses together explained 75 and 80% of the interaction effects in trials 2 and 3, respectively. Based on both nonparametric and AMMI analyses, Ecuador and Argentina were locations of relatively high interaction effects for both trials 2 and 3, although in Ecuador this interaction was not associated with any particular potato genotype. Other locations also had high interaction effects, but these occurred in only one trial. The genotypes Chata Blanca and, to a lesser extent, Torridon were relatively unstable in trials 2 and 3, but in the case of Torridon, resistant, this did not represent a significant loss of resistance.  相似文献   

4.
品种稳定性不同分析模型在西北小麦区域试验中应用探讨   总被引:6,自引:0,他引:6  
基因型与环境的互作在生物界普遍存在,本研究利用GGE模型、AMMI模型、Shukla模型和Ebehart-Russell模型对2009年国家旱地春小麦区试西北9个试点、8个参试品种(系)小麦品种稳定性进行了初步的比较.结果发现,Shukla简便,而GGE模型、AMMI模型分析结果更为全面、直观,两种模型也存在一定的差异,相比较,GGE模型能更有效分析基因型与环境互作效应、评价基因型稳定性以及环境的代表性和区分能力.  相似文献   

5.
Blast caused by Pyricularia grisea [teleomorph: Magnaporthe grisea] is an economically important and widespread disease of finger millet in the world. Host resistance is the most economical and effective means of combating this disease as finger millet is predominantly grown by resource-poor and marginal farmers. At the International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), we evaluated a finger millet mini-core collection of 80 germplasm accessions (about 1 % of the total germplasm collection representing major trait variability) for blast resistance both in the field and greenhouse. Field evaluation was done using a refined screening technique that included new improved rating scales for leaf, neck and finger infection. Sixty six of the 80 accessions showed combined resistance to leaf, neck and finger blast in two seasons (2009 and 2010) of field screening. A highly significant and positive correlation was found between neck and finger blast ratings (r?=?0.92), whereas small but significant correlations were found between leaf blast and neck blast (r?=?0.25) and between leaf blast and finger blast (r?=?0.30). These accessions were also screened for leaf blast resistance in the greenhouse by artificial inoculation of seedlings to confirm field observations. Fifty-eight of the 80 accessions were resistant to leaf blast in the greenhouse screen as well. These resistant accessions represented one wild (africana) and four cultivated races (vulgaris, plana, elongate and compacta) of finger millet that originated from 13 countries in Asia and Africa and exhibited considerable diversity for agronomic traits, such as maturity period, plant height and panicle type. These blast resistant accessions from the mini-core collection would be useful in finger millet disease resistance breeding programs.  相似文献   

6.
BACKGROUND: Rapid and efficient diagnostic tests for early screening of herbicide resistance are convenient alternatives to field screening methods. There is a need for a quick, reliable and cost‐effective method for rapid diagnosis of imidazolinone resistance in sunflower (Helianthus annuus L.). RESULTS: Two seed germination bioassays were developed. Seeds from three sunflower inbred lines differing in resistance to imidazolinones were germinated either on solid culture medium or placed in plastic pots filled with commercial perlite. After 8 days incubation under controlled conditions, both assays successfully distinguished susceptible genotype from the resistant and intermediate ones. The susceptible genotype showed arrested root growth at all herbicide treatments (root length < 1 cm). The resistant genotype developed a complete root system even when exposed to the highest dose of herbicide. However, no definite differences were observed for the intermediate and resistant genotypes with respect to root growth under the different herbicide treatments. CONCLUSION: The simple and rapid screening assays described in the present study were useful in discriminating imidazolinone resistance at the seedling stage. Therefore, these bioassays could be potential tools for early screening of imidazolinone resistance genes from large sunflower populations. Copyright © 2009 Society of Chemical Industry  相似文献   

7.
Soybean rust, caused by the biotrophic fungus Phakopsora pachyrhizi, is the most important foliar disease of soybean (Glycine max) worldwide. Deployment of resistant soybean cultivars is the best option for managing this disease. Genes conferring resistance to P. pachyrhizi have been identified, but pathotypes of the rust fungus overcoming these resistance genes have also been found. To identify novel resistance genes, soybean genotypes from both local and international sources were screened at multiple locations in Tanzania and Uganda in 2016 and 2017. The results from this screening revealed that infection types, disease severities, and sporulation levels varied among the genotypes and locations. The majority of the genotypes had tan-coloured (TAN) lesions and developed moderate sporulation, implying susceptibility, while only seven of the 71 lines had reddish-brown (RB) lesions and showed low disease severities in all of the screening environments. We identified seven genotypes that were the most resistant to rust in the most locations over the two years. These genotypes will be useful for further studies and, ultimately, for rust management, as they show broad resistance to various pathotypes of the rust fungus.  相似文献   

8.
Rice blast disease caused by the fungus Magnaporthe oryzae is one of the most devastating diseases causing huge losses worldwide. In the present study, major blast resistance genes were investigated in landraces originating from northeastern India. Based on phenotypic evaluation, 288 landraces were classified into three distinct groups: resistant (75), moderately resistant (127) and susceptible (86). The genetic frequencies of the 18 major blast resistance genes were between 6.2% and 27.4%, with only two genotypes possessing a maximum of nine blast resistance genes. The cluster and population structure analysis grouped the landraces into two groups. Through principal coordinate analysis, the scatter plots partitioned the resistant and moderately resistant landraces into different groups. Analysis of molecular variance showed maximum (96%) diversity within populations and least (4%) diversity between populations. Association analysis identified six markers, CRG4_2, RM72, tk59-2, pi21_79-3, RM1233 and RM6648, that are significantly associated with blast disease and explained a phenotypic variance of 1.1–6.5%. The associated genes could be used in marker-assisted rice breeding programmes for gene pyramiding to develop rice varietal resistance against blast disease. The present study represents a valuable blast resistance genetic resource that could be used for identification of new R genes, donors for blast resistance, and genomic studies.  相似文献   

9.
ABSTRACT We have developed a scale of differential hosts that enables the determination and comparison of level of resistance to Tomato yellow leaf curl virus (TYLCV) expressed by resistant tomato lines or by individual plants in a segregating population. The scale is composed of seven different homozygous tomato genotypes that exhibit different levels of TYLCV resistance, ranging from fully susceptible to highly resistant. The differential hosts composing the scale were inoculated with TYLCV under greenhouse conditions. Four weeks after inoculation the plants were evaluated for disease symptom severity, and virus DNA titer was determined. The different genotypes were arranged in the scale according to symptom severity score. The different genotypes were then tested under different environmental conditions, inoculated at different ages, and tested in a field experiment assaying TYLCV-induced yield reduction. While the symptom severity score of each individual resistant genotype changed under different environmental conditions, the relative position on the scale did not alter, except for one genotype. Thus, to evaluate disease resistance of a given tomato genotype, the genotype in question should be inoculated alongside the differential hosts composing the scale, and within 4 weeks one can determine the relative level of resistance of the tested genotype.  相似文献   

10.
ABSTRACT Gray leaf spot (GLS), caused by the fungus Cercospora zeae-maydis, is one of the most important foliar diseases of maize. This study was undertaken to estimate heritability of C. zeae-maydis resistance and examine the relationship between previously identified resistance loci and certain components of resistance including incubation period, lesion number, and maximum lesion length. Partially inbred progenies arising from hybridization between maize inbred lines VO613Y (high level of partial resistance) and Pa405 (susceptible) were examined in Ohio and South Africa. Heritability estimates of resistance were calculated based on severity and incubation period values. The range of heritability estimates based on severity was broad, with values ranging from approximately 0.46 to 0.81 (mean = 0.59). Estimates of mean heritability for incubation period were lowest (0.18), indicating that this component would likely be unsuitable for selection of germ plasm intended for deployment in diverse regions. Length of GLS lesions was significantly affected by host genotype, with resistant genotypes having shorter lesions from one site in Ohio during two seasons. Genotype also had a significant effect on incubation period and lesion number; the lower values for these components also were associated with resistant genotypes. The combined action of these resistance components resulted in lower overall disease severity.  相似文献   

11.
Thirty-seven cassava genotypes from Benin, including advanced breeding lines, were tested for their reaction to bacterial blight in the forest–savanna transition, wet savanna and dry savanna zones of Benin. Sixteen genotypes were repeated in 12 environments. In year 1998, genotypes RB92164, RB92022, TMS30572, BEN86004, RB92033 and Dangbo2, and in year 2000, genotypes RB92202, RB92151, RB92132 and TMS30572 were resistant in one ecozone. Among the more resistant genotypes, CAP94030, BEN86040, RB89509, RB92132 and TMS30572 showed low interaction across environments and were most stable in disease reaction. Ten genotypes were classified as high yielding across environments. Among the more resistant group of genotypes, only TMS30572 and RB89509 were high yielding, with RB89509 being unstable in yield across environments. Selection of genotypes proved reliable only after artificial inoculation. Comparing environments, artificially inoculated treatments in the wet savanna zone and in the forest–savanna transition zone with stable high symptom severity proved most suitable for screening of genotypes, while the wet savanna zone with low natural infection in year 1998 was suitable for production of propagation material, and the site in the dry savanna zone with natural infection in year 1998 was the best environment for cassava production. The correlation between disease severity and root yield was significant only for the non-inoculated treatment in the dry savanna zone in year 2000 (R = –0.58), but not in any other environment. Among the 37 genotypes tested, several genotypes can be recommended to farmers in specific ecozones, and genotype TMS30572 revealed as relatively stable in disease resistance and in high yield across ecozones.  相似文献   

12.
ABSTRACT The temporal and spatial patterns of Phytophthora infestans population genetic structure were analyzed in the Del Fuerte Valley, Sinaloa, Mexico, during the crop seasons of 1994 to 1995, 1995 to 1996, and 1996 to 1997 by geographical information systems. Isolates of P. infestans were obtained from infected tissue of tomato and potato collected from two areas: (i) where both potatoes and tomatoes are grown, and (ii) where only tomatoes are grown. The isolates were characterized by mating type, allozymes at the glucose-6-phosphate isomerase and peptidase loci, restriction fragment length polymorphism (RFLP) fingerprint with probe RG57, metalaxyl sensitivity, and aggressiveness to tomato and potato. The results suggest presence of an asexual population with frequent immigrations from outside the valley. There was a shift of mating type in the population from predominantly A2 to completely A1 in this period. The co-occurrence of mating types was restricted to very few fields in the area around Los Mochis where tomato and potato crops are grown. Genotype variation based on allozyme analysis and mating type was low with only one genotype affecting both crops each year. The genotypes affecting both crops were the only genotypes highly aggressive to both tomato and potato in laboratory aggressiveness tests and the only genotypes widespread on both the tomato and potato crops in the valley each year. These predominant genotypes were highly resistant to the fungicide metalaxyl. Data on metalaxyl sensitivity indicate that allozyme analysis can discriminate between sensitive and resistant isolates in the Del Fuerte Valley. RFLP analysis with the probe RG57 gives further discrimination of genotypes within an allozyme genotype. In the 1995 to 1996 season, four different RFLP genotypes were found within an allozyme genotype. However, there were five other dilocus allozyme genotypes that could not be further split by RFLP analysis in 1995 to 1996 and 1996 to 1997 seasons. Spatial analysis of genotypes suggests that each season individual fields near Los Mochis became infected with one or more genotypes, but only a single genotype, aggressive on both potato and tomato, occurred south and east to the Guasave area.  相似文献   

13.
以生产用5种基因型小麦为材料,利用农杆菌介导法将大麦黄矮病毒GPV株系复制酶基因ORF2转化愈龄40d的幼胚愈伤组织,经过G418筛选后,共再生出9株抗性植株,拓宽了小麦农杆菌转化的受体基因型。PCR及Southern杂交分析证实大麦黄矮病毒复制酶基因ORF2已经整合到小麦基因组中。初步抗病性检测结果显示转基因植株对GPV株系具有抗性。研究结果还表明,受体基因型、外植体的生理状态对农杆菌侵染起着至关重要的作用。  相似文献   

14.
Selection within populations of Phytophthora infestans was investigated by comparing the aggressiveness of single‐lesion isolates on detached leaflets of four potato cultivars with differing levels of race‐nonspecific resistance to P. infestans. The isolates included 23 representative of Northern Ireland genotypes from the early 2000s, used to inoculate previously reported field trials on competitive selection (2003–2005), plus 12 isolates recovered from the 2003 trial. The cultivars were those planted in the previous trials: Atlantic (blight‐susceptible) and Santé, Milagro and Stirling (partially resistant). Very highly significant variation for latent period, infection frequency and lesion area was found between genotypes and cultivars; differences between genotypes were more marked on the more resistant cultivars, but no one genotype was the most aggressive across all. Detached leaflets were also inoculated with mixtures of isolates from each genotype group at three sporangial concentrations: differences in aggressiveness between genotypes were more apparent at lower concentrations and on the more resistant cultivars. Genotype groups that were the most aggressive on the more resistant cultivars tended to be those selected by the same cultivars in the field. A mixture of all isolates of all genotypes was used to inoculate detached leaflets of the same cultivars. With one exception, single spore isolates recovered from any one leaflet belonged to a single genotype, but different genotypes were recovered from different cultivars. Phytophthora infestans isolates from Northern Ireland showed significant variation for foliar aggressiveness, and pathogen genotypes exhibited differential aggressiveness to partially resistant cultivars and interacted competitively in genotype selection.  相似文献   

15.
转基因水稻对稻瘟病的抗性研究   总被引:6,自引:0,他引:6  
 采用苗期初筛、复筛、抗谱测定和田间自然诱发试验等不同鉴定方法,对经分子检测证明已整合有碱性几丁质酶基因和β-1,3-葡聚精酶基因的22个转化系的转基因水稻植株进行稻瘟病抗性鉴定研究,筛选出对稻瘟病的抗性比原种对照七丝软占有明显提高的一系列转基因水稻品系,其中表现高抗的有来自F4-9转化株系的7个品系。高抗材料的R7代品系,经室内抗谱测定及田间病圃试验结果,仍然表现高抗稻瘟病。本研究通过转基因技术,成功地将优质感病品种改良成高抗品系,研究结果证明了利用基因工程手段培育抗病水稻新品种是一个非常有希望的育种途径。  相似文献   

16.
利用羊卓雍错1974-2019年水位、降水、蒸发和气温数据,分析了水位长期和年内变化特征及其原因。结果表明:羊卓雍错水位在1974-2019年波动下降。1974-1996年和2016-2019年影响水位变化的主因均是降水,1997-2015年的主因是包括人类活动在内的其他因素。1974-1996年,春季水位变化的主因是蒸发,其他季节均是降水。1997-2015年不同季节的主因均是其他因素。2016-2019年,影响春夏季的主因分别是蒸发和降水,秋冬季是气温。在当前气候变化趋势下,水位10年内将恢复2.0m。  相似文献   

17.
Field and controlled environment studies were undertaken to define the range and extent of available host resistances to Pseudocercosporella capsellae (white leaf spot) across diverse oilseed, forage and vegetable crucifers, including some wild and/or weedy species, and also within and/or derived from Brassica carinata. In each experiment, there was a wide range in host response from high resistance to high susceptibility as assessed by four disease parameters, viz. in the field for: (i) Area Under Disease Progress Curve (AUDPC) for percent leaves diseased with values ranging from 0 to 375.5; (ii) Percent Leaf Collapse Index (%LCI) for leaf collapse due to disease with values ranging from 0 to 23.0; and (iii), Percent Pod Area Disease Index (%PADI) for pod area affected with values ranging from 0 to 52.1; and (iv) under controlled environmental conditions for Percent Cotyledon Disease Index (%CDI) for cotyledon lesion size with values ranging from 0 to 27.5. At the Crawley field site, B. carinata ATC 94129 was the most resistant genotype with AUDPC?=?1.2, followed by Crambe abyssinica (AUDPC 8.7), Eruca sativa Eruc-01 (AUDPC 19.3) and E. vesicaria Yellow rocket (AUDPC 19.4). B. carinata ATC 94129 and B. oleracea var. capitata had the least leaf collapse, with %LCI?=?0.2. At the Shenton Park field site, 21 genotypes of B. carinata and B. oleracea var. acephala Tuscan kale showed total resistance, all with AUDPC values of 0. Of the B. napus genotypes carrying one or more B. carinata B genome introgressions, genotypes NC8 (AUDPC 23.0) and NC9-1 (AUDPC 26.2) were the most resistant. Genotypes as assessed on these disease criteria as having high level resistance generally showed no pod infection; in contrast to %PADI values up to 52 on the most susceptible genotypes. Under controlled environmental conditions, the most resistant genotype was B. carinata ATC 94129 with %CDI values of 0 and 0.2, respectively, across two experiments, along with B. napus genotypes Zhongyou 821 and Hyola 42, with a %CDI value of 0 in one of the two experiments. There was a high degree of correlation both within individual experiments across the different disease parameters and also between field and controlled environment experiments. Within both B. napus and B. juncea genotypes tested, the most resistant genotypes were from China, the most susceptible from India, with those from Australia intermediate.  相似文献   

18.
Demethylation inhibitor (DMI) fungicides are used to control brown rot in stone fruit worldwide. However, their specific mode of action can select resistant isolates of Monilinia fructicola. Monilinia fructicola resistant to DMI fungicides are associated with a fitness cost in the absence of selective pressure, indicating that the sensitive population can be re-established when discontinuing the fungicide in the field. This work aimed to build up the sensitive population of M. fructicola after discontinuing the use of tebuconazole for successive crop seasons. The sensitivity of M. fructicola to tebuconazole was assessed in four commercial peach orchards in Paraná and São Paulo States from 2012/13 to 2015/16. Different fungicide programmes were used and DMI fungicides were discontinued from 2013/14. The sensitivity of M. fructicola to tebuconazole was assessed by a mycelial growth assay in vitro and by determining the frequency of the G461S mutation in the MfCYP51 gene. The isolates from Paraná had high sensitivity to the fungicide across all seasons and the frequency of the G461S mutation remained below 5%. The isolates from São Paulo were highly resistant in the 2012/13 season; however, there was a gradual decline until 2015/16. In addition, the G461S mutation frequency in Sao Paulo State was about 80% in the 2012/13 season, but reduced until it was completely undetectable in 2015/16. These results provide evidence that resistance can be managed in orchards with high selective pressure to tebuconazole after discontinuing the use of the fungicide for at least 3 years.  相似文献   

19.
用AMMI双标图分析西瓜品种的产量稳定性及试点分辨力   总被引:3,自引:0,他引:3  
借助AMMI模型分析了2009年国家西瓜品种区域试验中的产量数据,结果表明:基因型与环境的互作效应小于基因效应和环境效应,但是也达到了极显著的水平,而且基因型的效应占比例较大,其次为环境效应。不同西瓜品种在各试点的品种稳定性和不同试点对品种的分辨力差异较大:品种G4(09-N2)的稳定性参数最大(Dg=15.53360),G7(09-N9)的稳定性参数最小(Dg=2.56881);8个西瓜品种中高产稳产的品种是G2(09-N1)和G1(09-N7),产量低且不稳定的品种是G4(09-N2)和G6(09-N12),产量高而稳定性一般的品种是G8(CK,09-N15),产量低而稳定的品种是G7(09-N9),产量一般且稳定性一般的品种是G3(09-N5),产量一般稳定性差的品种是G5(09-N8);在4个参试点中,甘肃兰州试点对品种的分辨力强,宁夏中卫试点和宁夏中宁试点对西瓜品种的分辨力一般,宁夏海原试点对品种的分辨力较差。  相似文献   

20.
Singh PK  Hughes GR 《Phytopathology》2005,95(2):172-177
ABSTRACT The symptoms of tan spot of wheat, caused by Pyrenophora triticirepentis, include a tan necrosis component and an extensive chlorosis component. Since tan spot has become the major component of the leafspotting disease complex of wheat in western Canada, the need for resistant cultivars has increased. This study was conducted to determine whether the resistance to tan spot found in a diverse set of spring and winter wheat genotypes was due to resistance genes not previously reported. The genetic control of resistance to necrosis induced by P. triticirepentis race 1 and race 2 was determined, under controlled environmental conditions, for spring wheat genotypes Erik and 86ISMN 2137 and winter wheat genotypes Hadden, Red Chief, and 6B-365. Plants were inoculated at the two-leaf stage and disease reaction was assessed based on lesion type. Tests of the F(1) and F(2) generations, and of F(2:3) and F(2:8) families, indicated that one recessive gene controlled resistance to the necrosis component of tan spot caused by both race 1 and race 2 in each cross studied. Lack of segregation in crosses between the resistant cultivars indicated that the resistance gene was the same in all of the cultivars.  相似文献   

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