The use of volunteers for conducting sponge biodiversity assessments and monitoring using a morphological approach on Indo‐Pacific coral reefs

• 1. Sponges are an important component of coral reef ecosystems, but even though they are widespread with the ability to significantly influence other benthic community members they rarely feature to any great extent in current monitoring or biodiversity assessment programmes conducted by volunteer and professional groups. This exclusion is usually because of the taxonomic problems associated with sponge identification.
• 2. A potential alternative to monitoring temporal or spatial change in sponge assemblages and assessing biodiversity levels is to characterize sponges using morphologies present rather than collecting species data. Quantifying sponge biodiversity (for monitoring and biodiversity assessments) at the morphological level is less time and resource consuming than collecting species data and more suited to groups with little training and experience of sponge taxonomy or in regions where detailed taxonomic information on sponges is sparse.
• 3. This paper considers whether the same differences and similarities in sponge richness and assemblage composition can be identified using species and morphological data in response to environmental gradients at two coral reef ecosystems in south‐east Sulawesi, Indonesia, and whether volunteers can be used to reliably collect morphological information. Sponge morphologies were classified into 14 groups and different morphological assemblages were found by the author at the two sites and between depth intervals. Comparisons of sponge species and morphological composition data showed that common patterns in assemblage structuring and richness could be identified irrespective of whether morphological or species data were used. In addition, a positive linear relationship was found between sponge species and morphological richness.
• 4. The morphological data recorded by volunteer divers (n=10) were compared with that collected by the author. Although volunteers recorded fewer sponges than the author (approximately 15% less), missing mainly small encrusting specimens, similar assemblage structure could be identified from both the volunteers' and the author's data.
• 5. The results showed that the same differences in sponge assemblages between sites and depths could be identified from both species and morphological data. In addition, these morphological data could be reliably collected by volunteer divers.

Copyright © 2006 John Wiley & Sons, Ltd.     

A generic framework to assess the representation and protection of benthic ecosystems in European marine protected areas

1. There is concern across the International Council for the Exploration of the Sea (ICES) region that a consideration of vulnerable components and the wider support mechanisms underpinning benthic marine ecosystems may be lacking from the process of marine protected area (MPA) designation, management and monitoring.
2. In this study, MPAs across six European ecoregions were assessed from a benthic ecology perspective. The study included 102 MPAs, designated by 10 countries, and focused on three aspects regarding the role of the benthos in: (i) the designation of MPAs; (ii) the management measures used in MPAs; and (iii) the monitoring and assessment of MPAs.
3. Qualitative entries to a questionnaire based on an existing framework (EU project ‘Monitoring Evaluation of Spatially Managed Areas’, (MESMA) were collected by 19 benthic experts of the ICES Benthic Ecology Working Group. A pedigree matrix was used to apply a numerical scale (score) to these entries.
4. The results showed clear differences in scores between ecoregions and between criteria. The designation‐phase criteria generally achieved higher scores than the implementation‐phase criteria. Poor designation‐phase scores were generally reiterated in the implementation‐phase scores, such as scores for assessment and monitoring.
5. Over 70% of the MPA case studies were found to consider the benthos to some extent during selection and designation; however, this was not followed up with appropriate management measures and good practice during the implementation phase.
6. Poor spatial and temporal coverage of monitoring and ineffective indicators is unlikely to pick up changes caused by management measures in the MPA. There is concern that without adequate monitoring and adaptive management frameworks, the MPAs will be compromised. Also, there could be an increased likelihood that, with regard to the benthos, they will fail to meet their conservation objectives.
7. This assessment was successful in highlighting issues related to the representation and protection of the benthos in MPAs and where changes need to be made, such as expanding the characterization and monitoring of benthic species or habitats of interest. These issues could be attributable to an ongoing process and/or an indication that some MPAs only have ‘paper protection’.

     

Taxonomic and functional macroinvertebrate diversity of high-altitude ponds in the Macun Cirque,Switzerland

1. Global environmental change is threatening freshwater biodiversity with ecological impacts predicted to be particularly severe in high-altitude regions. Despite this, an ecological understanding of high-altitude pond networks remains patchy, with only limited knowledge of the environmental and spatial predictors of taxonomic and functional diversity. Moreover, previous studies of pond ecosystems have focused primarily on taxonomic richness and largely overlooked functional diversity.
2. This study examined the influence of local environmental and spatial factors on taxonomic and functional α and β diversity (including the turnover and nestedness-resultant components) of 17 high-altitude (~2,500 m above sea level) pond macroinvertebrate communities, in the Macun Cirque, Switzerland.
3. Spatial processes (pond connectivity) were important drivers for taxonomic α diversity, while local environmental variables (pond permanence and surface area) were important determinants of functional α diversity. Species turnover was the most important component of β diversity for taxonomic composition, and functional composition demonstrated a nested spatial pattern.
4. Variation in taxonomic and functional composition (and the turnover and nestedness components of β diversity) were determined by local environmental variables despite the limited environmental gradients within the pond network. No significant effects of spatial variables on community composition were recorded for either facet of diversity, indicating that compositional variation was determined at a local scale. Water temperature, depth and pond permanence were consistently the most important measured drivers of diversity.
5. Given the importance of both spatial and environmental variables in structuring taxonomic and functional diversity, landscape-scale conservation and management activities that aim to improve or protect high-altitude freshwater biodiversity should focus on maintaining connectivity among ponds and environmental heterogeneity, particularly pond surface area, water depth, and hydroperiod. Understanding the mechanisms driving taxonomic and functional diversity will be critically important for the management and conservation of macroinvertebrate communities in high-altitude pond networks in the face of climatic warming.

     

Spatial properties of sessile benthic organisms and the design of repeat visual survey transects

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Hierarchical methods and sampling design for conservation monitoring of tropical marine hard bottom communities

• 1. A 4-year study developed methods for annual monitoring of shallow-water tropical marine benthic communities to detect changes in spatial patterning and benthic diversity. Two low-relief sponge/octocoral communities were selected from natural colour photography to gain a broader perspective on spatial variability in the benthic community structure of similar community types.
• 2. Changes in benthic spatial patterning were studied using four methods: (i) substrata and lifeform coverage characterization, (ii) species inventories, (iii) belt quadrat measurements of taxa-level (algae, sponges, octocorals and stony corals) density, area coverage and size, and (iv) belt quadrat measurements of species-level density, area coverage and area per individual or colony.
• 3. A sampling hierarchy of multiple parameters was utilized to detect changes in benthic community diversity. Substrata and lifeform characterizations (at the taxa-versus species-level) were the least sensitive and serve as indicators of catastrophic change in community structure.
• 4. Changes in spatial patterning of the benthos that may be attributed to low-level, chronic anthropogenic disturbances can be best studied utilizing belt quadrat measurements. The use of multiple study sites and a sampling hierarchy was useful in minimizing Type II errors and to determine the level of monitoring necessary to segregate natural rates of change from anthropogenic impacts.

     

Benthic habitat modelling and mapping as a conservation tool for marine protected areas: A seamount in the western Mediterranean

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Typology in Mediterranean transitional waters: new challenges and perspectives

• 1. Transitional waters are ecotones between terrestrial, freshwater and marine ecosystems, being characterized by high spatial heterogeneity and temporal variability.
• 2. The EU Water Framework Directive (WFD) posed to the scientific community the challenge to classify these ecosystems into a small number of types, while retaining a functional classification of ecosystem types.
• 3. A niche theory approach is proposed to identify the limiting forcing factors organizing biological quality elements, i.e. the limiting niche dimensions.
• 4. The analysis of a macro‐invertebrate dataset from published papers on 36 Italian lagoons suggested a two‐level typological classification of Mediterranean lagoons.
• 5. Basic ecological theories, such as niche and island biogeography theories, have fundamental implications for the process of developing a typological classification for all aquatic ecosystems, as required by the WFD.

Copyright © 2006 John Wiley & Sons, Ltd.     

Notes on coastal lagoon typology in the light of the EU Water Framework Directive: Italy as a case study

• 1. The European Water Framework Directive (WFD) requires that Member States differentiate the transitional water bodies into types.
• 2. WFD assigns coastal lagoons to two different water categories, ‘transitional waters’ and ‘coastal waters’ on the basis of freshwater influence.
• 3. The main physical factors that contribute to the genesis and characterization of coastal lagoons are coastal typology, tidal range and climate.
• 4. Italian lagoons are presented as an example of how these physical factors can be used in coastal lagoon characterization and typology. On this basis, a clear distinction of Italian lagoons into two main groups is possible: Northern Adriatic and Mediterranean.
• 5. Large lagoons can be profitably subdivided into a hierarchical system of sub‐basins facilitating both the comparison of parts of the same lagoon and the comparison between different lagoons.
• 6. The basins are consistent water bodies that can be used as managerial units for environmental conservation, species protection and wise use of resources.

Copyright © 2006 John Wiley & Sons, Ltd.     

Coralligenous assemblages along their geographical distribution: Testing of concepts and implications for management

• 1. The coralligenous habitat was studied at the large Mediterranean scale, by applying a standardized, non‐destructive photo‐sampling protocol, developed in the framework of the CIGESMED project.
• 2. The results provided evidence to support the following statements: (a) the assemblage pattern is not homogeneously distributed across the four Mediterranean ecoregions studied (biotic gradients hypothesis); and (b) the assemblage pattern does not change significantly when the information is aggregated to higher taxonomic levels (taxonomic sufficiency hypothesis).
• 3. Surrogate taxonomic categories higher than species, such as genus and family, can be used to reveal the multivariate pattern of the coralligenous assemblages.
• 4. Although preliminary at the pan‐Mediterranean scale, these outcomes set the scene for future comparisons as more data sets become available but also for comparisons between taxonomic and functional patterns.

     

Benthic foraminifera as proxies of marine influence in the Orosei marine caves,Sardinia, Italy

1. As a result of their location at the boundary between marine and continental domains, marine caves are affected by wide spatial and seasonal environmental changes. Only recently have benthic foraminifera been recognized as reliable indicators for the ecological zonation of these environments.
2. The present study is focused on two marine caves of the Orosei Gulf, Sardinia, Italy: Bue Marino and Bel Torrente. It investigates the spatial and seasonal variability of benthic foraminiferal assemblages relative to sediment grain size and water parameters (temperature, salinity, pH, and dissolved oxygen) collected during two campaigns in August 2014 and April 2015. The results from 2014 have been partially published.
3. Based on a comparison of the results of the two campaigns, the considerable reduction of foraminiferal abundance in Bel Torrente was deduced to occur because of the strong freshwater flows occurring during the rainy season; in Bue Marino, the less severe water flow allowed the identification of both living and dead foraminifera, although strongly reduced in number. These identifications allowed benthic foraminifera to be used to define the ecological zonation.
4. Entrance, confluence, and transitional ecozones were identified in Bue Marino cave on the basis of species abundance. The second ecozone, not recognized in 2014, was correlated with plant debris at the confluence of the two cave branches. The other two ecozones, which are characterized by the faunal shift from hyaline‐ to agglutinated‐prevalent assemblages, were attributed to the gradient of abiotic parameters detected from the outer to the inner portions of the cave. In both campaigns the same ecozones were recognized in terms of species composition, with exceptions being found to different extents as a result of seasonal variability.
5. As the distribution of foraminiferal ecozones is conditioned by a decreasing gradient of marine influence, long‐term monitoring may be regarded as a promising tool for future studies on sea‐level change.

     

团头鲂3个地理种群杂交效果的配合力和微卫星标记预测

根据南沙群岛西南部陆架海域鱼类调查研究的历史资料, 采用Nelson分类系统对鱼类物种组成进行了系统整理, 并从不同的分类阶元上分析了南沙群岛西南部陆架海域鱼类的多样性。分类阶元包含指数(TINCLi), 分类多样性指数(△+和∧+), 目级和科级水平丰富度(Rr)以及目级和科级水平相似性系数(C)为本研究的主要研究指数。结果显示, 南沙群岛西南部陆架海域共记录鱼类20目110科206属, 以鲈形目(Perciformes)种类居绝对优势。采用分类阶元包含指数分析, 南沙群岛西南部陆架海域鱼类组成目、科、属所分别拥有的(科、属、种), (属、种)和(种)的平均数目分别为(5.5、10.30、14.85), (1.87、2.70)和(1.44); 在目级水平上, 比高纬度的东海陆架、大亚湾和东沙群岛海域高, 并且与纬度梯度成反比, 证明低纬度海域的鱼类分类多样性低, 种类组成主要集中分布于较少数的分类类群。使用PRIMER5.2软件计算了平均分类差异指数△+和分类差异变异指数∧+, 数值分别为65.8和110.0, 其中△+接近于东海陆架(65.7), 高于东沙群岛(55.2)和大亚湾海域(62.2), 说明南沙群岛西南部陆架海域鱼类的亲缘关系接近于东海陆架海域鱼类, 比东沙群岛和大亚湾海域鱼类的远。与三个海区的相似性系数比较结果显示, 在目级和科级水平上, 南沙群岛西南部陆架海域鱼类组成同大亚湾海域更为接近。     

Aquatic macroinvertebrate biodiversity: patterns and surrogates in mountainous Spanish national parks

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Using ecological trajectories to track long-term taxonomic and functional changes in benthic shallow soft-bottom communities (Bay of Saint-Brieuc,English Channel)

1. Taxonomic and functional trajectories of benthic assemblages were studied in shallow soft-bottom sediments in the bay of Saint-Brieuc (Western English Channel). Changes were assessed at different spatial and temporal scales using a macrobenthic dataset based on 38 stations sampled in 1987 and 2019, coupled with data from one station sampled annually between 2005 and 2019 as part of the European Water Framework Directive monitoring programme.
2. Taxonomic trajectories indicated 1) changes in the structure and distribution of benthic assemblages, 2) an homogenization of the assemblages, and 3) significant functional shifts.
3. Fishing activities and nutrient enrichment are probably strong drivers of the observed changes, as suggested by the higher mortality rate of fragile, flexible, tubiculous and burrowing species, and the increase in the abundance of opportunistic species in the assemblages. Certain populations of macroinvertebrates seem jointly controlled by climate change and by the aforementioned local factors of disturbance.
4. The Community Trajectory Analysis framework appears as a new and interesting method to track ecological changes in marine ecosystems by measuring change with respect to a baseline state, to help define ecological recovery (station returning to the initial ecological state) and departure (station presenting increased changes over time), and to analyse trajectory similarity.
5. According to the degradation of habitat over time, we identify the need for the implementation of knowledge-based conservation strategies, especially within Natura 2000 sites.

     

Weak effects of habitat type on susceptibility to invasive freshwater species: an Italian case study

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Prioritizing localized management actions for seagrass conservation and restoration using a species distribution model

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Environmental impact of razor clam harvesting using salt in Ria Formosa lagoon (Southern Portugal) and subsequent recovery of associated benthic communities

• 1. Razor clams are found in different habitats ranging from sheltered systems (e.g. lagoons and estuaries) to open coasts. They are distributed worldwide and comprise a small number of species of high economic value. Depending on the specific habitat and species exploited, different mechanical and hand‐harvesting techniques are employed. While the environmental effects resulting from mechanized methods have been described by several authors, the impacts caused by traditional hand‐harvesting methods remain unknown. Therefore, a study was undertaken in Ria Formosa lagoon (South of Portugal) addressing the environmental effects resulting from harvesting Solen marginatus with salt.
• 2. No significant impact on the sediment was found; the main effect was an increase in salinity after covering the area with salt, which decreased rapidly with the flood tide and after a few hours had returned to pre‐harvesting levels.
• 3. No effects on benthic communities were observed, with similar fluctuation patterns recorded in control and experimental areas, the observed differences being attributed to the natural variability of benthic populations.
• 4. Based on the results obtained in the present study, a razor clam fishery using salt in intertidal areas can be considered environmentally ‘friendly’.

Copyright © 2008 John Wiley & Sons, Ltd.     

Decomposition processes in coastal lagoons and their implications for the assessment of ecological health

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The awakening of invertebrates: The daily dynamics of fishes and mobile invertebrates at Rapa Nui's multiple use marine protected area

• 1. On shallow reefs, day-night activity patterns between fishes and invertebrates are presumed to reflect trade-offs between feeding and predation; however, quantitative data on daily community dynamics are scarce. Moreover, night surveys may contribute important information for biodiversity inventories or baselines that normally are not considered.
• 2. This study used standardized day–night visual surveys of fishes and mobile invertebrates on the same transect lines in Rapa Nui (Easter Island) and investigated how diel patterns vary between taxonomic and trophic groups.
• 3. Distinct differences between taxonomic groups were observed, with fishes being more abundant during the day (>twice), whilst invertebrate abundance and richness showed an opposite trend with higher numbers at night (>three times).
• 4. Analysis of trophic groups showed that herbivorous and planktivorous fishes were more abundant during the day. Carnivorous fishes did not show any trends. Top predators (Apex) were observed only at very low abundances. However, a replacement amongst carnivorous fish species between day and night was found, where labridae fishes were practically absent during nights.
• 5. Most of the mobile invertebrates remained concealed during the day, probably due to the influence of predation risk (labrid fishes). The results emphasize the need for consideration of nocturnally active invertebrates in biodiversity inventories or baselines of reefs, which focus heavily only on diurnal surveys.
• 6. Day–night reef surveys should be included in marine protected area planning and monitoring as this provides a better understanding of shallow benthic communities and helps inform proper management decisions.