Benthic foraminifera as proxies of marine influence in the Orosei marine caves,Sardinia, Italy

1. As a result of their location at the boundary between marine and continental domains, marine caves are affected by wide spatial and seasonal environmental changes. Only recently have benthic foraminifera been recognized as reliable indicators for the ecological zonation of these environments.
2. The present study is focused on two marine caves of the Orosei Gulf, Sardinia, Italy: Bue Marino and Bel Torrente. It investigates the spatial and seasonal variability of benthic foraminiferal assemblages relative to sediment grain size and water parameters (temperature, salinity, pH, and dissolved oxygen) collected during two campaigns in August 2014 and April 2015. The results from 2014 have been partially published.
3. Based on a comparison of the results of the two campaigns, the considerable reduction of foraminiferal abundance in Bel Torrente was deduced to occur because of the strong freshwater flows occurring during the rainy season; in Bue Marino, the less severe water flow allowed the identification of both living and dead foraminifera, although strongly reduced in number. These identifications allowed benthic foraminifera to be used to define the ecological zonation.
4. Entrance, confluence, and transitional ecozones were identified in Bue Marino cave on the basis of species abundance. The second ecozone, not recognized in 2014, was correlated with plant debris at the confluence of the two cave branches. The other two ecozones, which are characterized by the faunal shift from hyaline‐ to agglutinated‐prevalent assemblages, were attributed to the gradient of abiotic parameters detected from the outer to the inner portions of the cave. In both campaigns the same ecozones were recognized in terms of species composition, with exceptions being found to different extents as a result of seasonal variability.
5. As the distribution of foraminiferal ecozones is conditioned by a decreasing gradient of marine influence, long‐term monitoring may be regarded as a promising tool for future studies on sea‐level change.

     

Predicting the response of nekton assemblages to seagrass transplantations in the Venice lagoon: An approach to assess ecological restoration

1. One of the major challenges to ensure effective restoration of estuarine habitats is to establish success criteria to determine whether the goals of restoration are met.
2. The aim of this work is to propose and test an approach to identify reference conditions and assess the recovery of nekton (fish, decapods and cephalopods) assemblages at seagrass restoration sites.
3. Nekton sampling took place from 2014 to 2017 in the northern Venice lagoon (northern Adriatic Sea, Italy) during spring at eight sites subjected to seagrass (Zostera marina and Zostera noltei) transplantation. In spring 2016, five natural seagrass sites in the same area were additionally sampled, and physico‐chemical water parameters and habitat structure were also recorded.
4. A multivariate generalized linear model approach was adopted in order to disentangle the relative effect of water quality and seagrass habitat structure on nekton assemblages of natural habitats. Models were subsequently employed to predict species composition of nekton fauna at each transplantation site, to identify the reference assemblage expected under site‐specific abiotic and habitat characteristics.
5. The average distance of the observed assemblage from reference conditions was used to track temporal trajectories of nekton colonization at transplantation sites, and to ultimately evaluate the recovery rate towards restoration goals.
6. This study highlights how a predictive approach could serve management purposes in ecological restoration, providing a concise tool to assess the functionality of restored habitats for associated fauna.

     

Utilizing benthic habitat maps to inform biodiversity monitoring in marine protected areas

1. The designation of marine protected areas (MPAs) requires the development of a monitoring design to assess the effectiveness of the closure in meeting its conservation objectives. Natural variability should be considered in the design, ideally determined using baseline information collected at the scale of the closure.
2. Monitoring benthos informs on general ecosystem state. Benthic habitat maps are widely used as surrogates of benthos in marine spatial planning, and could potentially be used to inform monitoring by minimizing confounding habitat effects.
3. Here, epibenthic diversity was assessed in the St. Anns Bank MPA in Atlantic Canada, the first assessment of benthic patterns at the scale of this closure. Epibenthic assemblages were determined using a photographic camera system along a single transect (~100–150 m in length) at 44 locations in 2013 and 2014 (with 10 or 11 images per location, providing a total of 438 images), prior to the designation of the MPA. Epibenthic patterns were correlated with a previously developed benthic habitat (benthoscape) map to determine the potential of using benthoscape classes as units for monitoring.
4. Hierarchical agglomerative clustering of epibenthic assemblages and similarity profile analysis revealed five clusters of assemblages in the MPA (P < 0.01), each of which were associated with specific indicator taxa. Some clusters of assemblages correlated well with distinct benthoscape classes representing either hard/coarse (gravel) or soft sediment (sand and mud), whereas clusters associated with mixed sediment segregated spatially. The within‐cluster variability in assemblages between locations was lower overall than within the management zones, but differed between clusters.
5. Similarities were detected with previous coarser‐scale assessments of epibenthic diversity in the St. Anns Bank MPA, but this study revealed a more complex benthic structure than previously thought. A monitoring design should thus consider this natural variability to reliably monitor change and aid in determining the effectiveness of the MPA.

     

Invasive Asian clam distribution pattern reveals minimal constraints to downstream dispersal and imperceptible ecological impacts

1. The Asian clam Corbicula fluminea is an invasive freshwater species that can cause adverse ecological and economic impacts. Information on its dispersal abilities, ecological preferences and impacts may contribute towards the improvement of management strategies, including those relating to regulatory demands such as the European Water Framework Directive (WFD).
2. Both the above perspectives were addressed through inspection of environmental constraints to C. fluminea dispersal and impacts in a semi‐natural drainage catchment (interconnected system of ditches). Forty sites were surveyed in 2014 to describe the species distribution and to characterize benthic macroinvertebrate communities, water column and sediment physico‐chemistry, as well as the hydromorphological conditions.
3. Clams were unevenly distributed in the study area and artificial barriers (dikes) did not prevent downstream dispersal of juveniles. Large variation in clam density (0–3077 clams m^?2) could not be explained by physico‐chemical or hydromorphological gradients. Although typical clam preference ranges reported in the literature were often exceeded, dense populations were nevertheless observed.
4. Macroinvertebrate community structure suggested associations between the Asian clam and some functional feeding groups. However, the impacts of clams on macroinvertebrate assemblages and ecological quality were negligible, suggesting that contemporary methods designed to comply with the WFD bioassessment scheme may fail to detect important drivers of ecological change in freshwater ecosystems.
5. This study demonstrated the reduced ecological impacts and broad ecological competence of the Asian clam, but also that its spread depends on human vectors. These findings highlight the need to rethink prediction tools supporting preventive measures against the introduction and spread of this invasive bivalve.

     

The significance of shore height in intertidal macrobenthic seagrass ecology and conservation

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Do active‐dispersing insects dominate the invertebrate fauna of rock pools in the wet–dry tropics,Kimberley, Australia?

1. Invertebrate assemblages of tropical freshwater rock pools (FRPs) are poorly known compared with temperate regions, where FRPs contain specialized, endemic taxa of high conservation value. Invertebrates were sampled from pristine FRPs in the Morgan River catchment in the Australian wet–dry tropics in the 2015 and 2016 wet seasons. Taxa were classified as either active or passive dispersers and by functional feeding groups. A range of physical variables were examined to identify associations with invertebrate assemblages.
2. Forty‐seven taxa were identified from FRPs; most were actively dispersing predatory insects, primarily Coleoptera and Hemiptera. Five adult insect species were found in most pools; other taxa were rare and scattered across FRPs. Two previously undescribed species of Spinicaudata were collected, but few crustacean taxa were recorded, and passively dispersing taxa were rare. Species accumulation curves indicated that had more pools been sampled, more taxa would have been collected in 2015, but in 2016 most species were collected.
3. There was no pattern in FRP assemblages related to any physical variable, but the assemblages in pools were correlated between sampling times. An opportunistic and mobile assemblage composed mostly of actively dispersing predatory insects may explain the absence of relationships with measured variables. Low hydrological stability in the wet–dry tropics may be associated with low taxon richness.
4. The dominance of actively dispersing insects is in contrast with FRP assemblages in temperate and arid regions. Studies of a wider range of FRPs from tropical regions are required to determine whether the fauna of these Kimberley FRPs are typical, and to fully describe short‐range endemic species across the Kimberley and elsewhere.
5. The FRPs have conservation value as habitat for endemic, specialist rock‐pool taxa, contributing to regional species pools. At present, a lack of knowledge of endemic FRP specialist species in tropical regions, including the Kimberley, impedes our ability to protect and conserve these species from disturbance.

     

Evaluating the distribution of priority benthic habitats through a remotely operated vehicle to support conservation measures off Linosa Island (Sicily Channel,Mediterranean Sea)

1. Explorations of the Mediterranean deep sea using remotely operated vehicles have shown that the sea bed hosts rich habitats, supporting high biodiversity. However, there have been only a few studies dealing with the southern part of the basin, leading to limited protection and conservation efforts in this area.
2. This study aimed to explore the sea bed off Linosa Island (Sicily Channel, southern Mediterranean Sea), which is considered a ‘sentinel area’ for alien species and global environmental changes owing to its geographic position, thus deserving special attention.
3. Remotely operated vehicle surveys, carried out in 2016 and 2017, were analysed to provide the first ecological characterization of benthic assemblages at depths −19 – −384 m around Linosa Island.
4. Communities were dominated by three priority habitats, amounting to 39% of the almost 5 km of the sea floor that was surveyed. These are represented in the euphotic zone by Posidonia oceanica meadows and, at greater depth, by newly discovered dense coral forests and extended rhodolith/maërl beds. Sixteen habitat-forming species included in the Red List of the International Union for Conservation of Nature (e.g. gorgonians Eunicella cavolini and Paramuricea clavata, and black corals Antipathella subpinnata and Leiopathes glaberrima) were recorded, as well as individuals of Sargassum sp. at −100 m depth.
5. The volcanic island of Linosa represents a small, naturally preserved area, with very limited human pressure, hosting rich marine benthic biodiversity. Given the high species and habitat richness, we recommend its inclusion in the Special Protected Areas of Mediterranean Importance project (United Nations Environment Programme) and suggest a redefinition of the existing marine protected area extension.

     

A pseudo time‐series reveals the rapid recovery and high variability of benthic macroinvertebrate populations following catchment wildfire

1. The increasing risk of wildfire has focused attention on the timescale of the impact and recovery of river ecosystems and methods for their bioassessment.
2. An 18‐year pseudo time‐series was exploited to document patterns in benthic macroinvertebrate impact and recovery and evaluate the efficacy of alternative metrics to assess fire damage. Macroinvertebrates were surveyed by kick‐sampling and data were collected on river habitats. Details of river catchments and wildfire were collated as a GIS database.
3. Macroinvertebrate richness and abundance recovered rapidly, marked by a phase of dynamic increase, followed by relative stability (0–2 years and 3–18 years, respectively). Across sites, richness and abundance were best explained by time since fire.
4. A biotic index of general river quality was ineffective as an indicator of fire damage. While a metric of K‐selected taxa (Odonata richness) was generally indicative of fire‐affected assemblages, a contrasting metric of r‐selected taxa (percentage of chironomids, baetids, and simuliids) was not.
5. Ordination analysis revealed time as a significant determinant of community structure across sites; however, its overall statistical importance was eclipsed by habitat characteristics (water quality, shade, altitude, and latitude) that were associated with ecological variation across both recently affected sites and the putatively recovered communities.
6. These results highlight the stochastic processes – environmental and ecological – that frame the macroinvertebrate response to wildfire. This probabilistic context emphasizes the difficulties of developing indicator taxa for wildfire bioassessment and reinforces the importance of standardized survey protocols and the use of contrasting metrics in the assessment of wildfire impact on the ecological quality of rivers.

     

Spatial and seasonal differences in the top predators of Easter Island: Essential data for implementing the new Rapa Nui multiple‐uses marine protected area

1. Reef fishes are an important component of marine biodiversity, and changes in the composition of the assemblage structure may indicate ecological, climatic, or anthropogenic disturbances. To examine spatial differences in the reef fish assemblage structure around Easter Island, eight sites were sampled during autumn and summer 2016–2017 with baited remote underwater video systems.
2. To determine seasonal changes, quarterly (seasonal) sampling was conducted at five of those eight sites. Fifteen pelagic species of fishes were recorded during this study, some of which have not previously been recorded in scuba surveys, including the Galapagos shark (Carcharhinus galapagensis, Snodgrass & Heller, 1905) and tunas (Scrombidae).
3. Significant spatial and seasonal differences were found in the fish assemblage. Fish assemblages from the south coast differed significantly from those along the west and east coasts, mainly due to the occurrence of top predators. Winter differed from other seasons, especially along the south coast where the island is more exposed to large oceanic swells and winds from Antarctica.
4. Owing to the variety and high relative abundance of species recorded during this survey, baited remote underwater video systems seemed to be an effective method for studying top predators at Easter Island. The identification of priority zones for the protection of top predator species represents an important contribution of this study, in order to develop management and conservation strategies to be implemented in the newly created Rapa Nui multiple uses coastal marine protected areas.

     

A comparison of freshwater mussel assemblages along a land‐use gradient in Minnesota

1. Intensive agricultural land use may have adverse impacts on freshwater mussel assemblages.
2. Before European settlement, the Minnesota River Basin (MRB) was home to dense and diverse assemblages of freshwater mussels. Of the 40 species that occurred there, 43% have been extirpated. the St. Croix Basin (SCB) in Minnesota/Wisconsin, in contrast, has maintained a dense and diverse mussel assemblage, probably owing to the maintenance of a higher‐quality ecosystem.
3. Mussels were sampled in four rivers representing an agricultural land‐use gradient. Timed searches were conducted in each of three rivers of the MRB, and in one river in the SCB in 2015. These were previously sampled by the Minnesota Department of Natural Resources (1998–2008).
4. Mussel abundance and richness were lower in the MRB compared with the SCB. There were negligible changes in mussel density in the SCB, whereas abundances declined 17–83% in the MRB over the same period. Rates of decline were greatest for rivers with higher agricultural land use. Individuals of species that inhabited both basins were larger in tributaries with higher agricultural land use.
5. MRB rivers with increased agricultural land use harboured a greater proportion of individuals displaying opportunistic (low life‐span, age and high fecundity) and periodic life‐history traits (moderate to high growth rates, low to intermediate fecundity, life span and age at maturity), whereas SCB assemblages had a greater percentage of mussels displaying equilibrium life‐history traits (long life‐span, late maturity and low reproductive effort). Also, rivers with higher amounts of suspended sediment contained more individuals classified as disturbance tolerant.
6. This study provides evidence that agricultural land use contributes to the loss of mussel diversity and abundance, especially in mussel species that are long lived or slow to reproduce. These life‐history traits may be correlated with increased sensitivity to disturbances commonly observed in agricultural basins, including more and larger flood events.

     

Changes to freshwater mussel assemblages after 25 years of impoundment and river habitat fragmentation

1. The Tennessee–Tombigbee Waterway is among the largest and most expensive environmental engineering projects of the 20^th century. The waterway accommodates barge navigation between the Tennessee River Drainage and Mobile River Basin through a series of locks, dams, canals, and dredged and diverted streams. These structures have altered riverine habitat and fragmented lotic habitats resulting in isolated freshwater mussel populations in patches of streams such as the East Fork Tombigbee River, where 42 species were known historically.
2. The first post‐waterway mussel surveys in 1987 and 1988 reported 31 taxa. During 2010 and 2011 surveys, 70 sites were sampled using both timed searches and quadrats and detected 29 extant mussel species. Between 1988 and 2010–2011 the relative abundance of nine mussel taxa decreased, whereas the abundance of 11 taxa increased. The populations of three federally listed species were detected at levels below the detection limits in 1988 as well as three non‐native unionids that appear to have colonized the East Fork Tombigbee River via the Tennessee–Tombigbee Waterway River.
3. Although mussel abundance and total species richness were relatively unchanged, assemblage composition shifted toward animals typical of smaller streams rather than large rivers. This shift suggests that present‐day East Fork Tombigbee River habitats favour smaller‐bodied, thinner shelled taxa that are laterally compressed and lack shell sculpture. These taxa are likely to be better adapted to hydrologically and hydraulically variable habitats than are thick‐shelled, large bodied, and sculptured mussels.
4. The results suggest that mussel assemblages are dynamic and may exhibit predictable responses to changes in hydrology, physical habitat conditions, and stream connectivity. However, examinations over broad (20+ yr) temporal scales are needed to observe these shifts. The data demonstrate the value of regular monitoring of diverse mussel assemblages and the importance of stream connectivity and flow modifications to this long‐lived group of benthic invertebrates.

     

Comparing the stability of successional transient models in kelp forests and barrens (south-east Pacific): Implications for conservation monitoring

1. Ecological stability based on statistical variability was contrasted with the asymptotical local stability of transient states during successional changes in community structure in kelp forests and barren grounds.
2. Simplified semi-quantitative ecological models with different levels of complexity were constructed to represent transient successional states in kelp and barrens, and Routh–Hurwitz's criteria and Levins' criterion of local stability were also estimated.
3. The results suggest that ecological stability based on statistical variation does not match local (mathematical) stability, since although successional changes in kelp exhibited less variability (measured as percentage coefficient of variation), barren beds were more locally stable. The local stability criteria used in the current work could be a suitable technique for evaluating the likelihood of transient ecological states to resist or change, since it considers states at equilibrium to maintain their properties only against small disturbances.
4. These outcomes are relevant because the natural alternation between kelp and barrens could be disrupted by the intensive harvest of kelp species carried out over the last 10 years on the central-north Chilean coast and in other temperate ecosystems.
5. Additionally, the negative effects of harvesting kelp species could have a synergetic relationship with other drivers such as climate change and coastal pollution. Thus, strict policy managements to limit the kelp harvest are deeply encouraged. A monitoring programme for assessing the current conditions of benthic–pelagic ecosystems along the Chilean coast is also required.

     

Spatial properties of sessile benthic organisms and the design of repeat visual survey transects

1. Monitoring the impacts of pressures, such as climate change, on marine benthic ecosystems is of high conservation priority. Novel imaging technologies, such as autonomous underwater vehicles (AUVs), remotely operated vehicles (ROVs), and towed systems, now give researchers the ability to monitor benthic ecosystems over large spatial and temporal scales.
2. The design of monitoring programmes that use such technologies is currently hindered by a lack of information about the typical abundance and spatial distributions of target indicators and the level of sampling required to detect changes. A further complicating factor is that these sampling platforms are often not able to be exactly relocated when conducting repeat surveys.
3. How the spatial properties of benthic organisms influence the estimates of cover, given alternative designs that vary in the geolocation precision of transects and the sampling intensity of images, is explored. A geostatistical modelling approach is used to quantify the spatial distribution of 20 key deep‐water invertebrate species at a long‐term monitoring site. The parameter estimates from these models are then used to simulate repeat transects with geolocation error and different levels of sampling.
4. Results suggest that species with short effective ranges (i.e. those with strong spatial dependence over relatively short distances) and large spatial variance, which suggests strong spatial dependence effects, will require greater sampling effort to achieve a given standard of precision.
5. Spatial offsets of 2 m, typical of an AUV, are unlikely to have dramatic impacts on the precision of estimates when sufficient images are sampled, but offsets of 10 m that are typical of towed systems may require a prohibitively high sampling effort for some species. These findings have important implications for benthic monitoring programmes, and highlight the importance of considering the interactions between sampling design, the technical limitations of survey equipment, and the spatial properties of indicator species.

     

Coastal geomorphology and oceanographic features shape subtidal benthic communities in management areas of central Chile

1. The spatial variation in community structure among 30 areas for the management and exploitation of benthic resources (AMEBRs) in central Chile was assessed from surveys conducted during the same spring–summer season. One hundred taxa identified in the subtidal surveys were grouped into 10 functional groups.
2. The influence and relative importance of external factors over benthic associations were assessed through nonmetric multidimensional scaling (NMDS) and path analysis. Three main categories of external factors were considered: ‘terrain traits’ (e.g. coastline exposure), ‘surface-ocean conditions’ (e.g. sea surface temperature, SST), and ‘fishery-related variables’ (e.g. cumulative landings).
3. The NMDS revealed a strong association between benthic community structure and both terrain and surface-ocean conditions (42% of variance explained by permutational multivariate analysis of variance), but not with fishery-related variables. Assemblages typical of rocky substrates were associated with larger seasonal fluctuations in SST and surface chlorophyll a. The presence of soft-bottom functional groups was associated with higher levels of surface fluorescence and larger seasonal fluctuations in a satellite-derived proxy for river-plume influence (nLw645).
4. A path analysis model for hard-bottom communities reached a 49% goodness of fit (GOF), with the presence of epifaunal filter-feeders, grazers, predators, and scavengers being significantly correlated with leathery and corticated foliose algae, which in turn depend on the fraction of rocky substrate in the AMEBR; the fraction of rocky substrate is positively correlated with coastline exposure.
5. The model for soft-bottom communities reached a 52% GOF with the presence of infaunal filter-feeders and epifaunal detritivores depending directly on SST and surface chlorophyll a. The fishery-related variables considered in the model had no apparent effect on the structure of either type of subtidal community.
6. These results provide a hierarchy of physical–biological associations determining the functional composition of subtidal benthic communities in management areas along central Chile. This knowledge may improve future assessments of ecosystem response to changes in environmental conditions and management strategies.

     

Distribution of demersal fish assemblages along the west coast of St Lucia: Implications for planning no-take marine reserves

1. Evidence-based decisions relating to effective marine protected areas as a means of conserving biodiversity require a detailed understanding of the species present. The Caribbean island nation of St Lucia is expanding its current marine protected area network by designating additional no-take marine reserves on the west coast. However, information on the distribution of fish species is currently limited.
2. This study used baited remote underwater stereo-video to address this shortcoming by investigating the effects of depth and seabed habitat structure on demersal fish assemblages and comparing these assemblages between regions currently afforded different protection measures.
3. From the 87 stations visited a total of 5,921 fish were observed comprising 120 fish taxa across 22 families. Species richness and total abundance were higher within the highly managed region, which included no-take reserves. Redundancy analysis explained 17% of the total variance in fish distribution, driven predominantly by the seabed habitats. The redundancy analysis identified four main groups of demersal fishes each associated with specific seabed habitats.
4. The current no-take marine reserves protected two of these groups (i.e. fishes associated with the ‘soft corals, hard corals or gorgonians’ and ‘seagrass’ groups). Importantly, habitats dominated by sponges, bacterial mats, algal turfs or macroalgae, which also supported unique fish assemblages, are not currently afforded protection via the marine reserve network (based on the five reserves studied). These results imply that incorporation of the full breadth of benthic habitat types present would improve the efficacy of the marine reserve network by ensuring all fish assemblages are protected.

     

Hierarchical spatial patterns and drivers of change in benthic macroinvertebrate communities in an intermittent Mediterranean river

• 1. The imminent damming of the Odelouca River, an intermittent Mediterranean river situated in the south‐west Algarve region of Portugal with valuable stands of riparian vegetation, has called for the compulsory implementation of compensatory measures.
• 2. In order to assess the primary environmental and human factors that drive change in the benthic macroinvertebrate assemblages of the Odelouca, and the spatial scale at which they occur, 30 sites were sampled for benthic macroinvertebrates and extensively surveyed using River Habitat Survey (RHS) in spring 2005.
• 3. A hierarchical cluster analysis of selected physical and RHS variables clearly indicated gradients of habitat quality (instream and riparian corridor) along both main channel and tributaries. Analysis of macroinvertebrate metrics by parametric and non‐parametric ANOVA showed the derived clusters of groups to be biologically distinct.
• 4. From a total of 64 variables, divided into two explanatory variable groups (environmental or pressure) over three spatial scales (habitat, reach and basin), just 20, predominantly environmental, variables were retained for subsequent analyses.
• 5. Partial canonical correspondence analyses of the selected environmental and pressure variables over the defined spatial scales showed that environmental variables contributed most significantly over all of the spatial scales and that pressure variables related to land‐use only contributed significantly at the level of the river basin.
• 6. Variables recorded by RHS contribute successfully to the detection of habitat quality gradients in a Mediterranean river system and the strongest drivers of macroinvertebrate change are primarily, but not exclusively, environmental factors occurring at middle and higher spatial scales.
• 7. Compensatory measures must therefore be implemented across a range of spatial scales, taking into account abiotic and biotic processes characteristic of disturbance‐driven Mediterranean systems that contribute to habitat heterogeneity and quality and confer functional and trophic diversity to the macroinvertebrate assemblages.

Copyright © 2007 John Wiley & Sons, Ltd.     

Assessing the relative impacts of land‐use change and river regulation on Burdekin River (Australia) floodplain wetlands

1. The Burdekin River floodplain wetlands are internationally important and act as a sink for sediments and nutrients that would otherwise enter the World Heritage‐listed Great Barrier Reef lagoon.
2. The Burdekin River has the highest natural discharge of any Great Barrier Reef catchment and contributes the greatest mass of sediment to the reef. The river and its catchment have been substantially modified by land clearance, river regulation introduced in the 1960s, the construction of the Burdekin Falls Dam in 1987 and invasive aquatic plants.
3. We hypothesised that the natural variability of Burdekin River discharge would render its wetland ecosystems resistant to human‐induced pressures.
4. Diatoms were analysed from the sediments of two lower Burdekin River floodplain wetlands with contrasting regulation histories. Labatt Lagoon has a long history of flow alteration, whereas Swan's Lagoon has experienced limited regulation.
5. Both wetlands experienced dramatic increases in sedimentation as a result of land clearance, yet the Swan's Lagoon diatom record indicates that the wetland's ecology remains within the range of natural variability. In contrast, Labatt Lagoon is markedly different from its pre‐settlement state. It is now permanent, having been ephemeral for more than 1000 years before European settlement. The conversion to artificial permanence facilitated aquatic plant invasion, resulting in more marked changes than widespread pastoralism.
6. Modern diatom assemblages from 28 lower Burdekin River floodplain wetlands indicate that the contemporary flora of Swan's Lagoon is unusual. Most wetlands have similar assemblages to those in the Labatt Lagoon record in its present, altered state. It is possible, therefore, that the ecological shift registered in Labatt Lagoon is widespread.
7. Diatom records highlight the striking impact that river regulation has had on the trajectory of the Burdekin floodplain wetlands. It is likely that wetland rehabilitation can be facilitated by the re‐introduction of a variable hydrological regime.

     

Taxonomic and geographical representation of freshwater environmental DNA research in aquatic conservation

1. Freshwater macro‐organismic environmental DNA (eDNA) is gaining increasing popularity in detecting invasive species, assessing community assemblages, and in mapping the distribution of taxa that are rare or otherwise difficult to monitor. The objectives of this article are to review the targets of published freshwater eDNA research in relation to aquatic conservation with a focus on geographic regions covered, as well as the habitats and species investigated.
2. The analysis of 272 peer‐reviewed articles published between 2005 and 2018 revealed that 57% of the 238 primary research papers have a focus on conservation science, mostly addressing invasive and endangered species, followed by 23% papers investigating methodological developments and 11% biodiversity surveys also using eDNA metabarcoding. A strong geographical pattern emerged, with Africa, South America, and the tropics being under‐represented. Taxonomic coverage was dominated by 123 fish species, followed by 29 amphibian and 28 mollusc species. Freshwater arthropods (27 taxa) were under‐represented in relation to their estimated species richness.
3. Taxonomic bias towards certain species such as fishes observed in freshwater eDNA research is pervasive in biodiversity research and conservation sciences, and thus is not surprising. Geographical representation was biased, with a few industrialized countries from the Northern Hemisphere contributing 72% of the studies. Both findings parallel biases known from other research areas, such as marine eDNA analysis, taxonomy, or invasion biology.
4. The application of eDNA in freshwater conservation will benefit from the development of general standards and guidelines that are necessary to integrate freshwater macrobial eDNA techniques in existing monitoring frameworks. To aid future freshwater conservation, our suggestions are to harmonize eDNA methods for comparable and easier implementation worldwide, and to increase international cooperation and funding for under‐represented geographical regions and neglected taxa. This is especially crucial for the known biodiversity hotspots in developing countries where rapid changes occur to freshwater habitats and biodiversity.

     

Relationships between macro‐epibenthic communities and fish on the shelf grounds of the western Mediterranean

• 1. The present study characterizes the macro‐epibenthic assemblages, and the relationships between demersal species and benthic habitats on the shelf trawl fishing grounds off the Balearic Islands (western Mediterranean).
• 2. The data used were collected during experimental bottom trawl surveys from 2002 to 2005. A total of 157 samples from 38–255 m depth were analysed.
• 3. Three macro‐epibenthic assemblages were identified in both the shallow (at 38–91 m) and deep shelf (90–255 m). Macroalgae bathymetric distribution was identified as the main factor explaining the segregation between shallow and deep shelf assemblages.
• 4. Two especially sensitive habitats were identified: maërl and crinoid beds; a third habitat was identified as Peyssonnelia beds, which represented the highest biomass on the whole shelf, with a similar species richness to the maërl beds. On the deep shelf, crinoid beds represented the highest biomass.
• 5. Habitat type had a significant effect on the distribution of demersal commercial species, most of them being more abundant in the two sensitive habitats mentioned and in the Peyssonnelia beds. Some species showed size‐specific habitat preferences.
• 6. Fisheries management in the area should take into account the resilience of these benthic habitats, and their importance from both ecological and sustainable fisheries management perspectives.

Copyright © 2008 John Wiley & Sons, Ltd.     

Factors driving spatial variation in egg survival of an ecologically and culturally important forage fish

1. Low trophic‐level forage fish are experiencing global declines, influencing coupled human–ocean systems worldwide. Along the northwest coast of North America, declining trajectories of Pacific herring (Clupea pallasii ) have prompted interest in improving the understanding of its population and community dynamics to better guide future conservation and management strategies.
2. To improve future population estimates and understanding of the ecological factors governing herring egg survival, the magnitude, spatial variation and mechanisms driving herring egg loss rates were quantified. This was achieved by way of repeated observational field surveys and a predator exclusion experiment.
3. Observational surveys revealed that regional egg loss rates (Z) were substantial and ranged from 0.101 ± 0.019 to 0.134 ± 0.028, the equivalent of 88–94% egg loss over a 21 day incubation period, or 50–60% egg loss over 6.8 days, the average time lag between spawn deposition and annual egg surveys. Furthermore, spatial variation was high, with egg loss rates varying 5‐fold among study sites. Depth, time since spawn, and spawn area were primary spatial drivers of egg loss, but predator abundance and exposure were secondarily important.
4. Experimental evidence showed that benthic predation and habitat type were strong drivers of egg loss, suggesting that a high proportion of eggs, particularly those spawned on benthic substrates, are consumed by predators.
5. These results have important conservation implications for managers and ecologists seeking to estimate herring biomass and to understand the environmental influences on predator–prey interactions that affect herring dynamics.