Genetic analysis of the Pacific white shrimp (Litopenaeus vannamei): heterosis and heritability for harvest body weight

The aim of this study was to estimate heterosis and heritability for harvest body weight of the Pacific white shrimp (Litopenaeus vannamei) measured at commercial farm conditions. Heterosis and heritability were estimated using a base population from diallel crosses of eight introduced strains. The base population included 9936 shrimp from 207 families that were produced with 188 sires and 172 dams using a nested mating design by artificial insemination. Heterosis was calculated basing on the least squares means (LSM) of harvest body weight. The results showed that most of the hybrids (75%) have positive heterosis for harvest body weight, which ranged from ?13.36% (UA2 × UA5) to 13.80% (UA6 × UA5) with a mean of 2.41%. The high amount of heterosis manifested in the hybrids indicated the usefulness of these hybrids for improving the growth. Variance components and heritability for harvest body weight were estimated using an animal model. The heritability estimate for harvest body weight was 0.092 ± 0.082 (h²) when genetic groups were excluded from the pedigree, but it was decreased when genetic groups were included in the pedigree ( = 0.066 ± 0.050), implying that there are strain additive genetic effect and heterosis in the base population. However, the heritability estimates for harvest body weight were significantly different from zero (P < 0.05) and there was no significant difference between h² and (P > 0.05). The results from this study indicated that significant improvement for growth is possible through cross‐breeding and selective breeding in L. vannamei.     

Genetic parameters for spawning and growth traits in the Pacific white shrimp (Penaeus (Litopenaeus) vannamei)

The aim of this study was to estimate genetic parameters for spawning traits and growth traits in a breeding line of Pacific white shrimp, Penaeus (Litopenaeus) vannamei, selected for growth and survival. Traits studied were number of eggs (NE) and number of nauplii (NN) and female body weight at insemination (FWI) and body weight at 130 days of age (BW130). Genetic parameters were estimated using a multivariate animal model. Heritability for NE and NN were estimated as 0.13 ± 0.04 and 0.03 ± 0.04 respectively. The contribution to NN total variation due to ‘factors associated with male’ effect was estimated as 0.47 ± 0.07. In the cases of FWI and BW130, heritability was estimated as 0.44 ± 0.08 and 0.19 ± 0.03 respectively. Genetic correlation between FWI and NE was estimated as 0.49 ± 0.15, between FWI and NN as 0.54 ± 0.39 and between NE and NN as 0.27 ± 0.41, whereas the genetic correlations of FWI, NE and NN with BW130 were 0.30 ± 0.13, ?0.21 ± 0.19 and ?0.25 ± 0.38 respectively. Although it is important to perform more studies on this issue, our results found no evidence of a genetic antagonistic effect between female reproductive traits and body weight at harvesting (130 days of age) in P. vannamei.     

Population ecological parameters and biomass of anchovy kilka <Emphasis Type="Italic">Clupeonella engrauliformis</Emphasis> in the Caspian Sea

ABSTRACT:   Through most of the last century, three endemic kilka species supported major commercial species in the Caspian Sea. It is clear that catches and abundance of all species have changed, but catch and sampling data are limited and stock assessments are inadequate. Recent changes in the Caspian Sea ecosystem have occurred as a consequence of climatic environmental change (sea level change) and ecologic change caused by the invasive ctenophore Mnemiopsis leidyi . This paper examines the effects of these changes on the population biology and biomass of anchovy kilka Clupeonella engrauliformis in Iranian waters of the Caspian Sea from 1995 to 2004. For most years during this 10-year period, we estimated the age structure of catch, length–weight relationship, von Bertalanffy growth parameters, condition factors, sex ratios, maturity stages determined from ovarian analysis, natural and fishing mortality, age at first capture, and spawning biomass. The instantaneous coefficient of natural mortality was estimated as 0.473/year and the instantaneous coefficient of fishing mortality varied during the 10-year period between 0.541 and 2.690/year. Biomass of anchovy kilka declined from about 186 000 t in 1996 to less than 12 000 t in 2004. Recent high fishing rates were not sustainable after the introduction of Mnemiopsis , so overfishing is part of the explanation for the collapse of anchovy kilka in the Caspian Sea.     

唐山海洋牧场海域焦氏舌鳎生长特征与资源量评估

根据2016—2017年唐山市海洋牧场周围海域调查资料,分析了唐山市海洋牧场周围海域焦氏舌鳎(Cynoglossus joyneri Günther)的体长和体质量组成;求解焦氏舌鳎的体质量关系式和体长、体质量生长方程,对唐山市海洋牧场焦氏舌鳎的资源量进行了估算。根据基于体长结构的实际种群分析法,估算出唐山市海洋牧场附近海域焦氏舌鳎的资源生物量为50.996 t。     

Long-term stock assessment and growth changes of the Japanese sardine (Sardinops melanostictus) in the Sea of Japan and East China Sea from 1953 to 2006

We estimated the stock size of Japanese sardine ( Sardinops melanostictus ) in the Sea of Japan and East China Sea since 1953 using cohort analysis based on the changes of growth patterns. Growth of Japanese sardine, estimated by using annual rings on archived scales since 1961, showed that body lengths were extremely stunted in the 1980–1987 year-classes. The body length at age 3 from February to April in the 1980–1987 year-classes, a period when the stock size exceeded 4 million tons, was 180.0 ± 2.6 mm (mean ± SD), and in the other year-classes was 195.1 ± 7.6 mm. The body length at age 3 and wet weight of zooplankton in August in the offshore area of the Sea of Japan had a significantly positive correlation. We assumed three scenarios for maturation ratios, and estimated Ricker's spawner–recruitment relationships. We analyzed the correlations between logarithmic recruitment residuals (LNRR) and environmental factors in winter, represented by the North Pacific index (NPI), Aleutian low pressure index (ALPI), Pacific decadal oscillation (PDO), monsoon index (MOI), Arctic oscillation (AO) and Southern oscillation index (SOI). Significant correlations were observed between MOI and LNRR and between AO and LNRR. A combination of strong MOI and weak AO would increase the biomass of phytoplankton and zooplankton and subsequently increase the recruitment of Japanese sardine.     

Strong phenotypic and genetic correlation between size and first maturity in Atlantic cod Gadus morhua L. reared in commercial conditions

Three‐year classes of Atlantic cod Gadus morhua were studied throughout their rearing in the eastern coast of Iceland from 2004 to 2011. The growth and status of maturity were recorded during the rearing. For one of the year classes, genetic parameters for body weight and maturity status were estimated from 757 individuals, which were the offspring of 40 dams and 20 sires. The estimate for heritability of body weight was h² = 0.34 at the average weight of 630 g, and heritability for proportion of maturity was h² = 0.17 given the same weight. The relationship between body weight and the proportion of mature individuals at first winter revealed a strong genetic correlation of r_G = 0.90. The phenotypic relationship between body weight and proportion of maturity was estimated with a Bayesian logistic regression as P(yi = 1(mature)) = Φ(β0 + β1_weight + β2_sex). The best fit yielded β0 = ?2.9320 with a 95% interval between ?3.2807 and ?2.5394, β1_weight = 0.0041 with a 95% interval ranging from 0.0035 to 0.0046 and β1_sex = ?0.0201 with a 95% interval from ?0.2003 to 0.1445. The gender had no notable effect. This strong phenotypic and genetic correlation in body weight and maturation suggests that an increased growth rate will consequently lead to a higher proportion of mature individuals in the population. As a consequence, genetic manipulations to simultaneously increase growth and delay maturation may present a challenge.     

Recruitment abundance index of Pacific bluefin tuna using fisheries data on juveniles

ABSTRACT:   The recruitment abundance index of Pacific bluefin tuna Thunnus orientalis was estimated from 1980 to 2003 fishing year by using the troll fishery data in Nagasaki Prefecture, western Japan. It has been shown that the troll fishery in Nagasaki Prefecture operates with good time–area coverage of the species habitat, and that the fishing power slightly changed during the period analyzed, based on fisheries statistics, published information, and interviews with the fishers. Average catch per unit effort (CPUEs) were standardized by a generalized linear model (GLM) considering the effects of fishing year, season and landing area. Standardized CPUE of age-0 bluefin tuna showed larger fluctuations year by year than the nominal CPUE combined for all ages. High CPUEs in fishing years of 1981, 1994, 1996 and 1999 were observed. Data from these years agreed with the higher recruitments estimated by virtual population analysis (VPA) or higher catch of age-0 fish reported for the Pacific side. The age-specific standardized CPUE of age-0 bluefin tuna in this study was judged to be a useful indicator of recruitment.     

Bioeconomic assessment of size separators in Pacific saury fishery

In the middle of the 1990s, Pacific saury fishery vessels began to install “size separators” to selectively land large-size class fish with a higher price. Contrary to expectations, this resulted in removal of the separators in 2006 because fishers believed the separators had contributed to price collapses in the 2000s. The intent of this paper is to investigate the effects of separators on both the fishery economy and stock of Pacific saury by simulating population and economic models under a single framework. For this purpose, we developed (1) an age-structured population dynamics model with stochasticity, and (2) an economic model spanning both price and inventory dynamics with stochasticity, in which each set of model parameters were estimated on the basis of time series data. In a 10-year simulation, the harvest quota was set constant from 20,000 to 400,000 t at intervals of 20,000 t, and the effects of separators were incorporated by controlling the catchability of 0-year-old fish. We found that separators increase the expected yield and reduce the deficit risk for harvests of 140,000 t and smaller. However, separators have the opposite effects for harvests of 160,000 t and larger.     

Temporal variation of seasonality of egg production and the spawning biomass of Pacific anchovy, Engraulis japonicus, in the southern waters of Korea in 1983–1994

Embryonic mortality, egg production and the spawning stock biomass of Pacific anchovy, Engraulis japonicus , off Southern Korea during 1983–1994, and their biological response to oceanographic features in spring and summer, were analysed. The instantaneous mortality rate (IMR) of embryonic stages decreased in spring and increased in summer, with a range of 0.33–1.23 day^–1 in spring and 0.78–1.69 day^–1 in summer. Egg production in summer was three times that during spring and production was low in the late 1980s. Mean lengths of yolk-sac larvae and adult females were greater in spring than in summer, whereas spawning fraction and spawning stock ratio (spawning biomass:adult biomass) were lower in spring than summer. Estimated mean spawning stock biomass ranged from 141 × 10³ to 380 × 10³ MT in spring and from 221 × 10³ to 557 × 10³ MT in summer. Statistically, the seasonal and long-term trends of embryonic mortality, egg production and spawning stock biomass of Pacific anchovy can be explained largely by spring warming, summer cooling and by less abundant zooplankton in the late 1980s.     

达里湖东北雅罗鱼的生长、死亡和生活史类型的研究

达里湖东北雅罗鱼(Leucisus waleckii)的种群结构参数(体长、体重和年龄)进行测定,估算种群的生长和死亡参数,并研究种群的生活史类型。结果显示:东北雅罗鱼的体长和体重的关系式Wt=0.0281L2t.8152,其vonBertalanffy生长方程各参数为渐近体长L∞=28.9763 cm,渐近体重W∞=366.95 g,生长系数k=0.2586,t0=-0.3237;自然死亡系数M为0.322,总死亡系数Z为0.9386,捕捞死亡系数F为0.6166;生活类型为r-选择。结果表明:作为渔业管理对策,达里湖东北雅罗鱼的起捕年龄应定为3龄以上。     

Age and growth of the silky shark Carcharhinus falciformis from the Pacific Ocean

ABSTRACT:   The present study estimated the age and growth of the silky shark Carcharhinus falciformis in the Pacific Ocean. Samples and biological data were collected from Japanese tuna longline and purse seine fisheries from 1992 to 1999. Vertebra centra were picked from 145 males and 153 females for age determination. The number of annual rings observed for males and females was 0–8 and 0–13, respectively. Combined sex von Bertalanffy growth equations were obtained as follows: L_t  = 216.4(1 − e^{−0.148( t +1.76)}) where L_t is precaudal length in cm at age t . A mature size for males was considered to be approximately 135–140 cm (precaudal length), with an estimated age of 5–6 years, whereas corresponding values for females were 145–150 cm and 6–7 years, respectively. Birth size ranged from 48 to 60 cm. There was no remarkable difference in growth, birth size and age at maturity between the Pacific and Atlantic Oceans. The life history parameters of the silky shark are approximately the same in both oceans.     

The zooplankton biomass in the Sea of Japan

We examined seasonal, annual variation and horizontal distribution of zooplankton in the Sea of Japan from 1966 to 1990. Zooplankton was most abundant in the spring. The spring maximum appeared in February–March and in April–May in the southern and eastern parts of the study areas, respectively. In the summer and autumn, a secondary peak was most conspicuous in the eastern part. The difference between the estimated biomass at night and day was large in the spring and small in summer and autumn. The biomass in the offshore southern area peaked about every 3 years between 1966 and 1983, and increased abruptly in 1990. The density in the area north of 39°N or 40°N was high. Total biomass estimated in the upper 150 m layer in the Sea of Japan (10⁶ km²) was 9.5 × 10⁶ t in the daytime and 16.6 × 10⁶ t at night.     

Potential yield estimates of unexploited pelagic fish stocks in Lake Malawi

The biomass of the offshore pelagic fish of Lake Malawi was estimated at 168 400 t and is currently unexploited by a fishery. This biomass comprises, by weight, 81% Cichlidae, 15% catfish and 4% Cyprinidae. A Beverton and Holt dynamic pool model was used to estimate potential sustainable yields and to forecast likely changes to the size and age structure of the fish populations under various levels of fishing effort. The total sustainable yield from the offshore fish population was estimated at 34 000 t yr^–1 and, if harvested, would almost double the yield of fish from the lake. Potential yields on an areal basis are low (14.2 kg ha^–1 yr^–1), but are consistent with expectations from studies of pelagic ecosystem productivity.     

Characteristics of a Pacific herring Clupea pallasii spawning bed off Minedomari, Hokkaido, Japan

ABSTRACT:   The spawning bed selection of herring Clupea pallasii off Minedomari, Atsuta, on the west coast of Hokkaido, Japan, is discussed in relation to the topography of the rocky shore and wave conditions during the spawning season. From 1998 to 2003, herring have spawned their eggs mainly on the leaves of the seagrass Phyllospadix iwatensis Makino in almost the same site on the rocky shore off Minedomari in the Atsuta area. The site is connected to a valley-like feature offshore. Wave conditions were surveyed at Minedomari during the spawning season in 2000 and the wave height was estimated from 1998 to 2003, except for in 2000, using the correlation of wave height between Minedomari and Ishikari Bay New Port, approximately 18 km south-west of Minedomari. Herring spawned under calm conditions, during which the wave height was approximately 0.5 m off Atusta and Aoshima and was 0.18–1.28 m off Minedomari. The distribution of water particle velocity on the sea bottom surface as a result of ocean waves off the Minedomari area, which was estimated based on the wave height and the topography of the coast, suggested herring could swim easily into the shallower area along the valley-like feature off Minedomari. Therefore, topographical features are thought to be one of the reasons why herring have used Minedomari as a spawning bed. Additionally, seepage of freshwater from the bottom, which was observed in this area, could also be the reason why herring spawn in Minedomari repeatedly.     

Quantitative dietary leucine requirement of juvenile Pacific white shrimp,Litopenaeus vannamei (Boone) reared in low‐salinity water

The experiment was conducted to determine the leucine requirement of juvenile Pacific white shrimp Litopenaeus vannamei (Boone) in low‐salinity water (0.50–1.20 g L^?1). Six diets were formulated to contain 410 g kg^?1 crude protein with fish meal, peanut meal and precoated crystalline amino acids with different concentration of l ‐leucine (16.72, 19.60, 22.06, 24.79, 27.28 and 30.16 g kg^?1 dry diet). Each diet was randomly assigned to triplicate groups of 30 shrimps (0.38 ± 0.002 g), and the feed trial lasted for 8 weeks. The results indicated that the maximum weight gain was observed at 24.95 g kg^?1 dietary leucine group, whereas the diets containing higher leucine concentration conversely reduced the growth performance (P < 0.05). Moreover, the highest body protein content and body protein deposition and the lowest haemolymph AST and ALT activities were also found at 24.95 g kg^?1 dietary leucine group. With the increase in leucine in diets, a dose‐dependent increase was found in body lipid content and haemolymph urea concentration. The polynomial regression calculated using weight gain, feed efficiency and body protein deposition indicated that the optimal dietary leucine requirement for L. vannamei reared in low‐salinity water was 23.73 g kg^?1 leucine of dry diet, correspondingly 57.88 g kg^?1 of dietary protein.     

Nursery performance of Pacific white shrimp (Litopenaeus vannamei Boone, 1931) cultivated in a biofloc system: the effect of adding different carbon sources

Effect of different carbon sources on nursery performance of Pacific white shrimp (Litopenaeus vannamei) cultivated in biofloc system was investigated. Shrimp postlarvae (98.47 ± 8.6 mg) were fed for 32 days in tanks with water volume of 130 L and density of 1 individual L^?1. One control treatment and four biofloc treatments (BFT1, BFT2, BFT3 and BFT4) with adding different carbon sources including molasses, starch, wheat flour and mixture of them, respectively, were considered at equal weight ratios. According to the results, salinity, dissolved oxygen and pH were not significantly different among the biofloc treatments (P > 0.05). Maximum pH (8.27) and maximum dissolved oxygen (6.35 mg L^?1) were recorded in the control. Maximum (0.43 mg L^?1) and minimum (0.09 mg L^?1) ammonia were recorded in the control and BFT2, respectively (P < 0.05). Using simple carbohydrates (molasses and starch) lowered the ammonia concentration significantly. The highest increase in body weight (1640.43 ± 231.28 mg), growth rate, specific growth rate (8.97 ± 0.42% per day) and biomass (190.29 ± 26.83 mg) were found in BFT1 and the highest survival (90 ± 0.77%) was found in BFT4. The highest feed conversion (1.52 ± 0.23) and the lowest feed efficiency (66.81 ± 7.95) were observed in the control (P < 0.05). The proximate composition analysis revealed an increase in lipid and ash in biofloc treatments. Results indicated that using biofloc technology with zero‐water exchange system and adding carbon sources could help to recycle waste and improve the water quality. Moreover, the type of carbonaceous organic matter as a substrate for heterotrophic bacteria would be effective in degradation and metabolization of ammonia and nitrite.     

Production and predation rates in a cannibalistic Arctic char (Salvelinus alpinus L.) population

Abstract – Production of cannibalistic Arctic char ( Salvelinus alpinus (L.)) and their prey conspecifics were estimated in an allopatric population, situated in an alpine ultraoligotrophic lake in central Norway. Estimates of population abundance were obtained by mark recapture and successive removal experiments. Assuming stable age distribution, we estimated mean yearly biomass (±95% CL) of char in sampled size groups vulnerable to predation (60 to 150 mm) to 7.93 (5.11–14.30) kg · ha⁻¹. Similarly, mean yearly biomass (±95% CL) of cannibalistic char (> 250 mm) was estimated to 0.62 (0.50–1.06) kg · ha⁻¹. Annual production (±95% CL) of char in length groups 60 to 150 mm was estimated to be 4.31 (2.74–8.03) kg · ha⁻¹ · year⁻¹, and production (±95% CL) of cannibalistic char to 0.19 (0.15–0.33) kg · ha⁻¹ · year⁻¹. Depending on the food conversion factor (set to vary from 0.1 to 0.4), the cannibalistic char removed from 10% to 40% of the production of char in sampled size-classes vulnerable to predation yearly. The overall ecological efficiency in energy transfer between the prey and predator population was 4.4%.     

Changes of proximate compositions and myoglobin content in the dorsal ordinary muscles of the cultured Pacific bluefin tuna <Emphasis Type="Italic">Thunnus orientalis</Emphasis> with growth

ABSTRACT:   Using the dorsal ordinary muscle (DOM) of cultured Pacific bluefin tuna (body length [BL]: 47.5–81.8 cm, body weight [BW]: 2.1–13.5 kg, n  = 15), the changes of proximate compositions and myoglobin (Mb) content with growth were investigated. There was a positive correlation ( r  = 0.9832, P  < 0.05) of BL and BW in cultured tuna. The protein contents of the DOM of cultured tuna decreased ( P  < 0.05) and the lipid contents had a tendency to increase (not significantly) with growth. The meat color changed from pink to red with growth. In addition, the Mb contents of the DOM of cultured tuna increased ( P  < 0.05) from 1.0 mg/g (minimum BW fish) to 3.8 mg/g (maximum BW fish) with growth. These results indicate that the increase of the Mb content in the DOM of cultured tuna is not caused by the restriction of exercise and overfeeding between 2.1 kg and 13.5 kg of BW.     

Reproductive biology of the common ponyfish <Emphasis Type="Italic">Leiognathus equulus</Emphasis> in the south-western waters off Taiwan

ABSTRACT:   Reproductive biology of the common ponyfish Leiognathus equulus was described based on 958 specimens caught by otter trawlers in the south-western waters off Taiwan and landed at Tungkang and Linuan fishing ports from March 2000 to February 2001. Macroscopic appearance of the ovary, gonad-somatic index, oocyte diameter frequency distribution, and histological examination suggested that the spawning season of the common ponyfish in south-western Taiwan waters is from May to August. Eight stages of oocyte development were determined based on histological examination, and ovarian development can be divided as immature, early maturing, late maturing, mature and spent stages. The sex ratio of 0.52 was not significantly different from 0.5 using χ² test, but females were overwhelmingly more when fork length (FL) was greater than 170 mm. The relations between fecundity (F), batch fecundity (BF), and body weight (BW) were estimated to be F =−5328 + 1.2946 BW ( n  = 132, P  < 0.05) and BF = −11.26 + 0.2748 BW ( n  = 25, P  < 0.05), respectively. Mean fecundity and mean batch fecundity (± standard error) were estimated to be 129 955 ± 79 343 and 28 160 ± 14 698, respectively. Sizes at 50% maturity estimated from the Logistic model were 162 mm FL and 158 mm FL for females and males, respectively.     

Population-level consumption by Atlantic coastal striped bass and the influence of population recovery upon prey communities

The potential impact of increasing striped bass, Morone saxatilis (Walbaum), populations on prey biomass under two different spatial scales: a broad perspective involving Atlantic coast‐wide populations and a finer‐scale analysis within the Hudson River, was modelled. Coast‐wide striped bass consumption ranged from 17 900 t (1982) to 147 900 t (1995). This level of consumption is equivalent of up to 57% of US menhaden landings over this period. Assuming 10% of diets comprise alosids, Hudson River striped bass ate 26.4–140.7 t of alosids annually from 1985 to 1994 – exceeding the estimated age‐0 alosid biomass in the river in 1990 (15.3 t). Analysis of possible management actions to reduce predatory demand was conducted. However, to achieve a 30% reduction in predatory demand would require movement towards historical overfishing conditions. Thus, it may not be possible to manage for high striped bass population levels and high levels of other species upon which they feed due to the competing demands for those species as prey and commercial or recreational resources.