Effects of turbidity on feeding of the young-of-the-year pikeperch (Sander lucioperca) in fishponds

The effect of water turbidity on the prey selection and consumption of the young-of-the-year (YOY) pikeperch in the planktivorous feeding stage was studied. Attention was paid particularly to the question of how the food selectivity depends on the size of YOY pikeperch and how the turbidity affects feeding in different size classes. Studies were carried out in ponds of two fish farms in Estonia over 4 years. Small cladocerans were the most preferred prey in the smallest pikeperch size class. In larger size classes, the most selected prey were the large cladocerans. Water turbidity affected the prey selection of the planktivorous pikeperch significantly. In more turbid environments, the larger zooplankters were more positively selected than the smaller ones. Turbidity decreased both total zooplankton consumption and Fulton's condition factor of fish only in the largest size class of pikeperch. The effect of turbidity on foraging and growth, and thus on the size of juvenile pikeperch of a particular year class is substantial under conditions where juveniles cannot shift from planktivory to piscivory.     

The influence of ontogeny and prey abundance on feeding ecology of age-0 Lake Whitefish (Coregonus clupeaformis) in southeastern Lake Michigan

A shift towards oligotrophic conditions in Lake Michigan has led to concern that altered trophic pathways are leading to lower early life survival and recruitment for Lake Whitefish (Coregonus clupeaformis). This study evaluated ontogenetic shifts in age-0 Lake Whitefish diets and evaluated how feeding ecology and the amount of food eaten varied with prey abundance and composition at a site in southeastern Lake Michigan during 2014–2017. Although prey densities varied among years, cyclopoid copepods were overall the most abundant prey available. In turn, cyclopoids were the predominant prey item in diets each year, particularly for the smallest larval Lake Whitefish. However, there was a tendency for the importance of cyclopoids to decline somewhat in each diet index as fish grew and other prey such as calanoid copepods, Bosminidae, Daphniidae and/or chironomids increased in importance. High zooplankton abundance, especially high cyclopoid abundance, available to the small size groups of Lake Whitefish (<21 mm) in 2014 was associated with high food mass/fish, high number of zooplankton eaten/fish, and low incidence of empty stomachs compared with 2015–2017. As fish grew, the impact of food abundance on prey consumption diminished somewhat, indicating that the relationship between fish feeding ecology and the prey environment can change quickly with fish size during the early life period.     

Effect of light intensity,prey density,and ontogeny on foraging success and prey selection of larval yellow perch (Perca flavescens)

Light intensity has been shown to influence the foraging success of larval fish. However, the effect of light intensity on larval foraging is likely variable and influenced by both the density and characteristics of planktonic prey. In this study we examined the influence of light intensity of 0.1, 2.0, and 60 μmol·s^?1·m^?2 Photosynthetically Active Radiation (PAR) on foraging of yellow perch (Perca flavescens) larvae at two prey densities. We fed them with a mixture of zooplankton taxa common to lakes inhabited by yellow perch. In addition to light intensity and prey density, the effect of larval yellow perch size was examined by using fish ranging from 9 to 15 mm. The results of our study indicated that yellow perch larvae are well adapted to feed at a wide range of light intensities, as there was no difference in foraging success at investigated light intensities. Increasing prey density from 25 to 150 (zooplankton·l^?1) significantly improved the foraging success of larval yellow perch. However, the influence of prey density on foraging success was dependent on fish length. Improved foraging success at increased prey densities occurred only for individuals with a total length >10 mm. Overall, prey selection by fish larvae was influenced by light intensity, prey density, and fish length. However, the factors that influenced selection for specific prey types differed. Our study, combined with evidence from other field and laboratory work, highlight the need for a better understanding of the influence of prey density on foraging throughout ontogeny.     

Effects of turbidity on foraging of juvenile black and white crappies

Turbidity can fluctuate rapidly during the early life of fishes, impacting foraging behaviours. For piscivores, turbidity may hinder foraging, whereas planktivores and juvenile fishes may increase foraging activity and decrease antipredator behaviours in moderate levels of turbidity. Black crappie (Pomoxis nigromaculatus) and white crappie (P. annularis) population trends are often related to changes in turbidity. Yet effects of turbidity on juvenile foraging of these species are unknown and may differ between species. To evaluate effects of three turbidity levels (0, 25 and 50 NTU) on juvenile crappie foraging, controlled experiments compared (a) consumption and size selection for a single prey and (b) selection, total consumption and energetic value of diets when offered three distinct prey options. Overall, black crappies exhibited universally greater diet biomass than white crappies. Black crappies displayed higher prey consumption and were more size selective of a single‐prey type, whereas white crappies were less size selective and maintained uniform consumption as turbidity increased. Selection patterns for three prey types were similar among species and turbidity levels, with Chaoborus preferred and Chironomus avoided. However, black crappies also avoided Daphnia, whereas white crappies consumed them neutrally. Overall, turbidity did not impair foraging of juvenile crappies. Turbidity‐driven fluctuations in prey base paired with predator interactions likely also contribute to observed growth and abundance fluctuations in natural systems.     

Hatchery‐reared endangered Colorado pikeminnow (Ptychocheilus lucius) undergo a gradual transition to piscivory after introduction to the wild

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Effects of stocking density and natural food availability on the extensive cage culture of pejerrey (Odontesthes bonariensis) in a shallow Pampean lake in Argentina

An experiment was conducted for 80 days at La Salada de Monasterio Lake (Buenos Aires, Argentina) to assess the effect of stocking density and natural food availability on the growth and production of zooplanktivorous juveniles of pejerrey (Odontesthes bonariensis) in extensive cage culture. Ten cages were installed and stocked with 33‐day‐old fish, at three density treatments: 25, 50 and 75 ind. m^?3. Zooplankton was analysed in terms of abundance, biomass and diversity considering three size classes. Caged pejerrey diet was assessed regularly. The pejerrey gut contents composition was clearly different from cage zooplankton, showing a trend to contain bigger components. Reared fish exhibited a tendency to diversification of the diet and to change the mean prey size depending on fish length and stocking density. Regression models showed a positive and direct effect of the bigger zooplankton biomass on fish growth rates, which were also inversely affected by the availability of smaller zooplankton. The results demonstrate that stocking density and available zooplankton, in both quantity and quality, are key factors in regulating extensive cage culture of pejerrey. Handling stocking densities in a dynamic way it is possible to maximize fish growth, biomass harvest or fish number according to the goals of production.     

Pelagic–littoral resource polymorphism in Hovsgol grayling Thymallus nigrescens from Lake Hovsgol,Mongolia

Resource polymorphism is a widespread phenomenon in post‐glacial fishes where multiple morphotypes of a species occur sympatrically and exhibit distinct resource use. Availability of open niches and high levels of within and among species competition are thought to drive differences in morphology and may provide insights into early stages of speciation. Hovsgol grayling (Thymallus nigrescens) are endemic to Lake Hovsgol, a lake colonised by fish following the Pleistocene, and are threatened with habitat loss due to climate change and illegal harvest. Previous analysis of Hovsgol grayling diet inferred through C and N stable isotopes suggested the presence of littoral and pelagic foraging groups. We hypothesised that morphology of the two foraging groups would reflect predictions of functional morphology, indicating the presence of resource polymorphism. To test this hypothesis, we evaluated evidence from C and N stable isotopes, stomach contents, fish ages, capture location and morphology. Two foraging groups of Hovsgol grayling were identified through stomach content and C and N stable isotope analysis. Individuals with greater zooplankton consumption were more frequently captured in the pelagic zone, exhibited higher gill raker counts, larger orbit (eye) sizes, longer paired fins, narrower head width, larger maxilla and smaller size at age than the group with greater reliance on benthic invertebrate prey. These differences were generally consistent with those described in other fish species exhibiting littoral–pelagic resource polymorphism. Our study provides the first example of littoral–pelagic resource polymorphism in the salmonid subfamily Thymallinae and highlights the potential influence of competition on fish evolution.     

The influence of pelagic habitat selection and interspecific competition on productivity of juvenile walleye pollock (Theragra chalcogramma) and capelin (Mallotus villosus) in the Gulf of Alaska

Here we investigate processes affecting productivity of capelin and walleye pollock in the Gulf of Alaska. We examine pelagic habitat selection by comparing the distribution of juvenile fish and their prey with oceanographic properties and we evaluate the potential for interspecific competition by comparing diets and measures of foraging. The primary field study was conducted in Barnabus Trough, Kodiak Island, Alaska, during September 2005. The distribution of fish was assessed acoustically and trawls were used to collect individual fish for stomach content analyses. Physical and biological data were collected with conductivity–temperature–depth probes and zooplankton tows. Age‐0 pollock were distributed in cool waters offshore of a mid‐trough front, coincident with the distribution of euphausiids, their preferred prey. In contrast, capelin and their prey (copepods) were distributed throughout the trough. We observed that sympatric capelin (occurring with pollock) often had reduced foraging success compared to allopatric capelin (occurring alone). Results of a bioenergetic model also suggest that the exclusion of capelin from foraging on euphausiids can have negative consequences for capelin growth.     

Variation in prey selection and foraging success associated with early‐life ontogeny and habitat use of American paddlefish (Polyodon spathula)

Many fishes are planktivorous during early life and switch to piscivory or consume larger food items as ontogeny progresses. In contrast, paddlefish start as particulate feeders and later become filter feeders. Few studies have identified food items essential for paddlefish growth, survival and recruitment surrounding this ontogenetic diet shift. The objectives of this study were to investigate (i) prey types consumed by paddlefish, (ii) variability in prey selection surrounding an ontogenetic diet shift and (iii) whether habitat affected paddlefish prey selection or foraging success. We analysed gut contents of 189 wild age‐0 paddlefish from the middle Mississippi River (MMR) and also conducted a laboratory experiment to address these objectives. We found that paddlefish primarily foraged on benthic macroinvertebrates in the MMR, which differed from previous studies in lentic systems, suggesting young paddlefish prey selection may be labile depending on habitat (i.e., lotic versus lentic). Dominant prey of wild‐caught and experimental age‐0 paddlefish were caddisfly larvae (Trichoptera), followed by hemipterans and amphipods. We found little evidence that habitat attributes affected foraging success, but the most common prey items consumed were associated with wing dike habitat and the upstream and downstream tips of alluvial islands. Our experimental study revealed that if provided a mixture of organisms, age‐0 paddlefish will primarily consume macroinvertebrates while age‐1 paddlefish will mainly filter zooplankton. Overall results suggest young paddlefish prey selection can be highly variable, but also heavily reliant on a narrow group of prey resources.     

Rates of piscivory predict pharyngeal jaw morphology in a piscivorous lineage of cichlid fishes

The pharyngeal jaw apparatus is a key innovation hypothesised to increase foraging efficiency and facilitate utilisation of novel resources among teleost fishes. Here, we tested whether dietary characteristics could predict pharyngeal jaw morphology among eight species of Neotropical Crenicichla. Additionally, we tested the hypothesis that pharyngeal jaws may impose a functional constraint on piscivory via pharyngeal gape. We quantified the shape of the lower pharyngeal jaw (LPJ) using linear and geometric morphometrics and quantified diet using the relative volumetric proportions of prey items. We used principal component analysis to describe major axes of variation in LPJ shape and dietary patterns. The major axis of dietary variation significantly predicted LPJ morphology, which was driven by a significant relationship between LPJ shape and rates of piscivory. We also found that rates of piscivory predicted size‐corrected LPJ depth. Size‐corrected pharyngeal gape also significantly predicted rates of piscivory such that pharyngeal jaws may constrain piscivory by limiting pharyngeal gape. Strong form‐to‐function linkage between pharyngeal morphology and trophic patterns suggests an adaptive quality of the pharyngeal apparatus but may also impose functional constraints when consumers must switch prey or when prey availability is temporally or spatially unpredictable.     

Impact of environmental and innate factors on the food habit of Chinese perch Siniperca chuatsi (Basilewsky) (Percichthyidae)

Laboratory and field investigations were conducted to study the food habit of Chinese perch Siniperca chuatsi (Basilewsky) from first feeding through adult stage. Only fish larvae were consumed by Chinese perch larvae (2–21 days from hatching), and the presence of zooplankton did not have any significant effect on their survival rate. The ability of Chinese perch to feed on zooplankton is clearly limited by some innate factor. Instead of gill rakers, Chinese perch larvae have well‐developed sharp teeth at the first feeding stage, and are well adapted to the piscivorous feeding habit unique to the larvae of Chinese perch, e.g. they bite and ingest the tails of other fish larvae. At the first feeding stage (2 days from hatching), daily rations were both very low, either in light or complete darkness. Although early‐staged Chinese perch larvae (7–17 days from hatching) could feed in complete darkness, their daily rations were always significantly higher in light than in complete darkness. Late‐staged Chinese perch larvae (21 days from hatching) were able to feed in complete darkness as well as in light, similar to the case of Chinese perch yearlings. Chinese perch yearlings (total length, 14–16 cm) consumed prey fish only and refused shrimp when visual cues were available (in light), but they consumed both prey when visual cues were not available (in complete darkness), suggesting that prey consumption by Chinese perch yearlings is affected by their sensory modality in predation. Both prey were found in the stomachs of similar‐sized Chinese perch (total length, 14–32 cm) from their natural habitat, suggesting that shrimp are consumed by Chinese perch at night. Prey selection of Chinese perch with a length >38 cm, which consumed only fish in the field, appears to be based upon prey size instead of prey type. These results suggest that although environmental factors (e.g. light intensity) affect prey detection by Chinese perch, this fish is anatomically and behaviourally predisposed to prey on live fish from first feeding. This makes it a difficult fish to cultivate using conventional feeds.     

Diel distribution,behaviour and consumption of juvenile Chinook salmon (Oncorhynchus tshawytscha) in a Wilderness stream

Abstract – Understanding population regulation in juvenile salmonids requires distinguishing the effects of intrinsic (size, behaviour) and extrinsic (food, competition) factors. To examine the relative influence of these variables on juvenile Chinook salmon (Oncorhynchus tshawytscha) in the Salmon River drainage (ID, USA), we examined diel differences in foraging microhabitats, behaviour and consumption in two areas with consistent differences in parr‐to‐smolt survival. In lower Big Creek (LBC, high‐survival area) and upper Big Creek (UBC, low‐survival area), we observed fish by snorkelling, recording length, behaviour (foraging rate and aggression) and physical (depth, velocity, cover, temperature) and biotic (density, size and species of neighbouring fish) microhabitat features. Stomach contents were extracted to estimate consumption. Depth and temperature were greater in LBC, where Chinook salmon were significantly larger and present at lower densities. Fish in LBC exhibited higher foraging activity during the day than night, but there were no size differences between day and night foragers. In UBC, a higher density area, foraging behaviour did not change between day and night, although the smallest size classes did not forage nocturnally. Regression models that integrated physical and biotic variables suggested that physical factors influenced foraging in both areas, but competition also affected foraging in UBC. Our results demonstrate that fish from low‐ and high‐survival populations in Big Creek are exposed to different physical and biological influences during their first growth season, which are reflected in different diel foraging behaviours.     

Functional response and size‐dependent foraging on aquatic and terrestrial prey by brown trout (Salmo trutta L.)

Gustafsson P, Bergman E, Greenberg LA. Functional response and size‐dependent foraging on aquatic and terrestrial prey by brown trout (Salmo trutta L.).Ecology of Freshwater Fish 2010: 19: 170–177. © 2010 John Wiley & Sons A/S Abstract – Terrestrial invertebrate subsidies are believed to be important energy sources for drift‐feeding salmonids. Despite this, size‐specific use of and efficiency in procuring this resource have not been studied to any great extent. Therefore, we measured the functional responses of three size classes of wild brown trout Salmo trutta (0+, 1+ and ≥2+) when fed either benthic‐ (Gammarus sp.) or surface‐drifting prey (Musca domestica) in laboratory experiments. To test for size‐specific prey preferences, both benthic and surface prey were presented simultaneously by presenting the fish with a constant density of benthic prey and a variable density of surface prey. The results showed that the functional response of 0+ trout differed significantly from the larger size classes, with 0+ fish having the lowest capture rates. Capture rates did not differ significantly between prey types. In experiments when both prey items were presented simultaneously, capture rate differed significantly between size classes, with larger trout having higher capture rates than smaller trout. However, capture rates within each size class did not change with prey density or prey composition. The two‐prey experiments also showed that 1+ trout ate significantly more surface‐drifting prey than 0+ trout. In contrast, there was no difference between 0+ and ≥2+ trout. Analyses of the vertical position of the fish in the water column corroborated size‐specific foraging results: larger trout remained in the upper part of the water column between attacks on surface prey more often than smaller trout, which tended to seek refuge at the bottom between attacks. These size‐specific differences in foraging and vertical position suggest that larger trout may be able to use surface‐drifting prey to a greater extent than smaller conspecifics.     

Temperature,discharge and development shape the larval diets of threatened green sturgeon in a highly managed section of the Sacramento River

Feeding at early fish life stages is a key determinant of survival to recruitment. To understand the environmental and developmental determinants of early life stage feeding in ESA‐threatened green sturgeon (Acipenser medirostris), we performed a diet study in a highly managed section of California's Sacramento River, where temperature and discharge are controlled by dam releases. Utilising field collections from 2012 to 2016, we assessed the impacts of temperature, discharge and morphological development on the composition and number of prey items in larval green sturgeon diets. Results show that there are more empty stomachs at colder temperatures. Higher discharge conditions decreased prey taxon richness and counts, especially the abundance of cyclopoid copepods in diets. Fish smaller than 30 mm had teeth on the oral jaws and showed a strong reliance on zooplankton prey. The developmental loss of teeth in fish greater than 30 mm was associated with decreased zooplankton consumption and increased richness of benthic macroinvertebrates in diets. Our results show that river management through dam releases has the potential to impact the earliest life stage of green sturgeon by reducing the prevalence of favoured zooplankton prey in diets.     

No room for dessert: A mechanistic model of prey selection in gut‐limited predatory fish

Predatory fish structure communities through prey pursuit and consumption and, in many marine systems, the gadoids are particularly important. These predators have flexible feeding behaviours and often feed on large prey items. Digestion times of large prey are usually longer than handling times, and gut processing limits feeding rate at high prey density. Optimizing the gut content mix can therefore be an important behavioural strategy. Here, we develop a foraging model that incorporates gut processing and use the model to disentangle internal and external limitations on feeding in the omnivorous cod (Gadus morhua, Gadidae). We extend the traditional definition of prey profitability to consider prey digestive quality, which we quantify for prey of Northeast Atlantic cod populations. We find an important role for gut limitation; within a range of ecologically relevant temperatures and prey densities, predicted feeding rates were strongly reduced compared to feeding constrained by external factors only, and the optimal diet composition under gut limitation differed from predictions from traditional foraging theory. Capelin, a main prey of Northeast Arctic cod, had the highest digestive quality of all prey across ecosystems, but the cold temperatures in the Barents Sea strongly limited feeding rate by slowing down digestion. Baltic cod fed on a higher proportion of poor‐quality prey compared to the other populations, contributing to its slow growth in relation to water temperature. Gut limitation is particularly important to consider in foraging models for fish with many alternative prey species or fish occupying cold waters where digestion is slow.     

Interactions between juvenile roach or perch and their invertebrate prey in littoral reed versus open water enclosures

Abstract – Structural complexity offered by submerged macrophytes was shown to have fundamental effects on interactions between fish and their prey. However, less information is available for littoral reed (Phragmites spp.) stands. A previous field study found juvenile roach and perch to coexist within the reed stands. It was suggested that reed serves mainly as refuge against littoral piscivores, such that coexistence of perch and roach in the reed was externally forced. Several hypotheses were raised to explain why roach nevertheless showed good growth performance. Three of the hypotheses were tested experimentally. In particular, we were interested in how the confinement of fish to one of the reed or open water habitats alters feeding and growth patterns of juvenile age‐1 perch and roach. Fish were stocked separately into littoral enclosures for a 3‐week period in densities which had been found in the surrounding lake. Development of zooplankton and macroinvertebrate biomasses was observed by sampling the enclosures three times over the experimental period. Individual consumption of prey groups by the fish was calculated with a bioenergetics model, and was compared with prey group biomass in the enclosure treatments. The confinement of fish to one littoral habitat had clear effects on diet composition and growth rates. Roach fed less zooplankton and partially switched to macroinvertebrates in the reed enclosures when compared with the open water treatments, and consequently their growth rates were lower in the reed. Perch preferred macroinvertebrates in both habitats, without any difference in growth rates between the habitats. Effects of fish predation on both zooplankton and macroinvertebrate biomass were low in open water and reed enclosures. Daily consumption rates were only in a few cases higher than 40% of the available biomass of the respective prey group, but mainly were below 10% of available biomass. Therefore, we argue that both the diel horizontal migrations of roach and the relatively low consumption rate of fish when compared with the available resource biomass allow the coexistence of juvenile roach and perch in littoral reed stands.     

Modification of 0+ perch foraging behaviour by indirect cues of predation risk

Abstract –  Intake rate and prey size selection of 0+ perch, Perca fluviatilis , from Lake Wallersee (Austria) was studied at different illumination (day light: 400 lx, twilight: 2 lx) during 5 days of habituation to novel surroundings in aquaria. The hypothesis was tested that high illumination and novelty of surroundings (transfer from holding to test aquaria) as indirect cues of predation risk influences 0+ perch foraging behaviour. Significantly lower total intake and lower proportion of large Daphnia magna (two prey size groups, 2.9 and 1.2 mm, were used) were observed at higher illumination and under novel surroundings. Habituation to novelty caused an increase in consumption of large prey and decrease in consumption of small prey. During the whole period of habituation, more large prey was ingested at twilight than at daylight; no light-induced difference in ingestion of small prey was found. Foraging 0+ perch responded to indirect nonspecific cues of predation risk by reduction of intake of large prey, which are costly in terms of handling time. This allows fish to be more vigilant without ceasing their foraging activity even in potentially dangerous situations. In the lake, young perch are most vulnerable to abundant piscivorous fish and birds during the day; in twilight perch can afford a more time-consuming foraging activity.     

Differential growth rates related to initiation of piscivory by hatchery-reared larval Pacific bluefin tuna Thunnus orientalis

Fast growth plays an important role in survival processes during the early life stages of both field-captured and hatchery-reared Pacific bluefin tuna Thunnus orientalis. Marked growth variations in hatchery-reared tuna larvae are frequently observed even for the same age and within the same rearing tank after the onset of the piscivory. We hypothesized that these small growth variations in the growth of tuna larvae at the onset of piscivory lead subsequently to large growth variations and tested the hypothesis using three size groups (large, intermediate and small) of hatchery-reared fish by nitrogen stable isotope and otolith analyses. Stable isotope analysis revealed that the large group rapidly utilized prey fish larvae, but the smaller groups depended more on rotifers as the main prey item relative to the large group. The otolith radius from the core to the increment corresponding to the first feeding on yolk-sac larvae was compared among the three size groups. The results revealed that the large group had larger otolith radii than the small and intermediate groups. Our findings suggest that small growth variations apparent during the early larval stage of tuna could induce further large growth variations in the late-larval and juvenile stages through differences in the initial ability to utilize piscivory.     

Size-dependent predation on marine fish larvae by Ctenophores, Scyphomedusae, and Planktivorous fish

Size-dependent predation rates on marine fish larvae by the ctenophore Mnemiopsis leidyi , scyphomedusa Chrysaora quinquecirrha , and planktivorous fish Anchoa mitchilli were estimated via experiments in 3.2 m³ me-socosms. Predation rates on larvae of the goby Gobio-soma bosci were estimated in relation to 1) length of larval prey, 2) presence or absence of alternative < 1 mm zooplankton prey, and 3) a predator-prey interaction between the scyphomedusa and ctenophore. The consumption rate of larvae by the three predators generally declined as larval length increased. The ctenophore ate fewer (1.0 d^-1 per predator) larvae than did the medusa (7.8 d ^-1 per predator) or bay anchovy (4.0 d ^-1 per predator), but it consumed larvae in all size classes tested (3.0–9.5 mm SL). Predation by bay anchovy and the medusa was more size-dependent: 3.0–5.0 mm larvae were most vulnerable. Fewer larvae were eaten by the ctenophore and bay anchovy when zooplankton alternative prey was available, but predation on larvae by the medusa was not influenced by alternative zooplankton prey. Consumption rate of fish larvae by the medusa was reduced 20–25% when the ctenophore was present as its alternative prey. An encounter-rate model was developed and its parameters estimated from the experimental results. Model simulations indicated that the relationship between larval size and vulnerability is dependent on size, swimming speed, and behavior of both predators and larvae, and that bigger or faster-growing fish larvae are not always less vulnerable to predation.     

Biotic and abiotic controls on body size during critical life history stages of a pelagic fish,Pacific herring (Clupea pallasii)

Variation in growth and body size during critical life history stages can have important implications for life history schedules and survivorship. For Pacific herring (Clupea pallasii), there is still debate as to whether juvenile body size is governed by density‐dependent or ‐independent processes and few have evaluated whether the relative importance of either process shifts over the course of early ontogeny. We used a unique data set consisting of seasonal measurements of abundance, body size, and spatial distribution within a semi‐enclosed basin of Puget Sound (Washington State, U.S.A.) to measure the relative importance of temperature and cohort abundance on body size at distinct time periods, and evaluated whether density‐dependent habitat shifts might be responsible for density‐dependent growth. Over the 9 years of sampling (2001–2010) midsummer body size was positively related to temperatures experienced during the egg/yolk sac and larval stages and unrelated to cohort abundance. However, fall body size was negatively correlated with abundance and uncorrelated with both midsummer body size and temperature, indicating a shift from density‐independent to density‐dependent control over the course of the growing season. Thus, density‐dependent effects may supplant density‐independent effects exhibited early in herring life history. Our data on spatial distributions of herring and their zooplankton prey indicate that density‐dependent reductions in growth may be explained by density‐dependent habitat shifts that lead to reduce overlap of herring with zooplankton. Evidence of density‐dependent growth in marine fish populations is often attributed to exploitative competition, but our results suggest that these patterns may partly be mediated by density‐dependent distribution expansions in to prey‐poor habitat.