Prespawning migratory behaviour and spawning success of sea-ranched Atlantic salmon, Salmo salar L., in the River Gudenaa, Denmark

The migratory behaviour of sea-ranched Atlantic salmon, Salmo salar L., was analysed by radio-telemetry in the River Gudenaa, Denmark. The main objectives were to: (1) estimate mortality of returning adults through the fjord; (2) observe rate of progression and migratory pattern in the fjord and river; and (3) record whether spawning occurs in the river. Forty-two returning salmon (19 males and 23 females of total body length from 60–97 cm) reared and released as smolts, were caught and equipped with external radio transmitters in the outer estuary of the River Gudenaa in 1994 and 1995. Of the tagged salmon, 18 (43%) were caught in the estuary, four (10%) were not recorded after release and 20 (47%) entered the river. The mean rate of progression through the fjord was 7.6 km d−1 (range 1.4–18.2) in 1994 and 5.4 km  d−1 (range 1.6–17.1) in 1995. Eleven salmon were alive at the onset of the spawning period. Eight were retrieved dead from the river during or after the spawning period; four with empty gonads assumed to be successful spawners, and four with intact gonads. In 1994, unsuccessful spawners (found dead with intact gonads) entered the river earlier and had a longer total migration distance in the river compared to successful spawners. This suggests that spawning success of sea-ranched salmon is associated with time of river entry and river migration length.     

Density of brown trout, Salmo trutta L., and Atlantic salmon, Salmo salar L., parr after point and scatter stocking of fry

Atlantic salmon, Salmo salar L., and brown trout, Salmo trutta L., fry were point and scatter stocked in the early part of June at densities of 63–263 fry 100 m⁻² per species in the River Viantienjoki, a small river in northern Finland, and their population densities were assessed in late summer. Both species were always stocked together in similar quantities. Point stocking was used in the first 2 years and scatter stocking in the following 2 years. In point stocking, there was no correlation between the distance from the stocking sites (maximum = 250 m) and parr density in census sites ( r = −0.013 and 0.019 for brown trout and Atlantic salmon, respectively). The stocking density of fry did not influence parr density in August by either method or by species. Stocking density explained only from 11% to 23% of the parr survival depending on the species or stocking method. The mean densities of Atlantic salmon and brown trout parr did not differ significantly from each other at any fishing site ( P > 0.05). Both point and scatter stocking appear to be suitable methods for use in small rivers. The parr densities depend more on the other factors (e.g. habitat quality) than the stocking method, and the choice between methods could be based on the time and labour available.     

Snorkelling as a method for assessing spawning stock of Atlantic salmon, Salmo salar

Abstract  Reliability of underwater snorkel counts of adult Atlantic salmon, Salmo salar L., was analysed in the tributaries of the River Teno, close to the spawning period. In small (width 5–20 m) rivers, the replicated total counts of salmon were reasonably precise (CV = 5.4–8.5%), while in the medium-sized river (width 20–40 m) the precision of the counting method was considerably lower (CV = 15.3%). Low precision in a medium sized river was also observed in an experiment using marked live fish where the observation efficiency varied between 36.4% and 70.0%. In a small river, the detection efficiency of artificial fish silhouettes (test salmon) was almost perfect in pools (98%), but decreased in rapids (84%). Separate counts of males, females, grilse and large salmon were usually more variable than total counts, indicating that divers were more capable of locating a fish than properly identifying its sex and sea-age. The behaviour of adult salmon was favourable to conduct snorkel counts, as fish normally stayed still, or after hesitating, moved upstream (>95%of the cases) when encountering a diver. The high observation efficiency (>90%) and precision, favourable behaviour of salmon and congruence between snorkel counts and catch statistics in small rivers suggest that reliable data on Atlantic salmon spawning stock can be collected by snorkeling provided that the environmental conditions are suitable and the divers are experienced.     

The prevalence of escaped farmed salmon, Salmo salar L., in the River Ewe, western Scotland, with notes on their ages, weights and spawning distribution

Abstract  The prevalence of escaped farmed Atlantic salmon, Salmo salar L., in the River Ewe, western Scotland, was assessed. After the establishment of smolt cages in the catchment and marine cages near the river mouth during 1986–1987, approximately 425 000 parr and smolts, and 122 000 growers have escaped. Between 1987 and 2001, farmed salmon occurred in the rod fishery in 13 of the 15 years, contributing at least 5.8% of the total catch, with a maximum annual frequency of 27.1%. It was estimated that <1% of fish escaping from the marine cages entered the river, but contributed at least 27% of potential anadromous spawners in 1997. Radiotagged, farmed fish in 2001 probably spawned in three subcatchments also used by tagged wild fish. Despite the likelihood of hybridisation there was no change in the median weight or marine age of wild fish, but smolt age decreased significantly ( P  < 0.02). The Ewe has a depleted wild salmon population (≤900 anadromous adults), and further genetic introgression by escapees should be prevented.     

Historical changes in age structure of Atlantic salmon, Salmo salar L., in the River Eo, northern Spain

Abstract Variations in the age structure and number of Atlantic salmon, Salmo salar L., running into the River Eo in northern Spain were assessed from catch records of sport fisheries for the period 1949 to 1991. The analysis focused on two periods (1951–1960 and 1981–1991) for which more complete data on fish number, size and age were available. Over the whole period, no evidence for a decline in the total salmon run was found, but the last few years revealed significant changes in both the number and age structure of salmon caught. The catches were mainly composed of multi-sea-winter salmon, and this did not change from the 1950s to the 1980s as the proportion of grilse remained unchanged. However, since 1980, there was a marked decline in both the proportion of 3-sea-winter salmon (versus 2-sea-winter fish) and the frequency of previous spawners among the multi-sea-winter salmon. These changes were probably linked because most of the previous spawners re-entered the river as 3-sea-winter or older salmon. River age of salmon caught in the 1950s was low and constant (about 90% of the catch had smolted at one year) but the mean age of smolting increased in the 1980s.     

Homing patterns of Baltic salmon, Salmo salar L., from smolts released from two hatcheries in the River Dalälven, Sweden

The River Dalälven Baltic salmon, Salmo salar L., population has been maintained by stocking reared fish since the early 1920s. Initially, all rearing was carried out at one hatchery, but since the late 1980s two have been used. Both hatcheries are situated 9–10 km from the river mouth but some 600 m apart. All broodfish were caught in a single fish trap situated some 700 m upstream of the upper hatchery. The salmon smolts were released just below the water outlets of each hatchery, respectively. About 2% of the released smolts from each hatchery were tagged annually with Carlin tags. Total recapture rates were higher for smolts from the lower hatchery. A higher proportion of recaptured fish was reported from the home river for salmon from the upper hatchery. The migration within the river to the fish trap was more precise for fish from the upper station. Strays were very late in the season and of a higher number from the lower hatchery. Observations of jumping salmon by the outlet from the lower station indicated that salmon returned to that point. The lower recaptures in the trap were considered a result of a shorter river migration of salmon from the lower hatchery.     

Life‐history differences of juvenile Chinook salmon Oncorhynchus tshawytscha across rearing locations in the Shasta River,California

Salmon from different locations in a watershed can have different life histories. It is often unclear to what extent this variation is a response to the current environmental conditions an individual experiences as opposed to local‐scale genetic adaptation or the environment experienced early in development. We used a mark–recapture transplant experiment in the Shasta River, CA, to test whether life‐history traits of juvenile Chinook salmon Oncorhynchus tshawytscha varied among locations, and whether individuals could adopt a new life history upon encountering new habitat type. The Shasta River, a Klamath River tributary, has two Chinook salmon spawning and juvenile rearing areas, a lower basin canyon (river km 0–12) and upper basin spring complex (river km 40–56), characterised by dramatically different in‐stream habitats. In 2012 and 2013, we created three experimental groups: (i) fish caught, tagged and released in the upper basin; (ii) fish caught at the river mouth (confluence with the Klamath River, river km 0), tagged and released in the upper basin; and (iii) fish caught at the river mouth, tagged and released in the lower basin. Fish released in the upper basin outmigrated later and at a larger size than those released in the lower basin. The traits of fish transplanted to the upper basin were similar to fish originating in the upper basin. Chinook salmon juvenile life‐history traits reflected habitat conditions fish experienced rather than those where they originated, indicating that habitat modification or transportation to new habitats can rapidly alter the life‐history composition of populations.     

Epizootiology of Parvicapsulaminibicornis in Fraser River sockeye salmon, Oncorhynchusnerka (Walbaum)

Late-spawning Fraser River sockeye salmon, Oncorhynchus nerka , stocks have suffered significant prespawn mortality associated with an unusually early freshwater migration pattern and the myxosporean parasite Parvicapsula minibicornis . Surveys of migrating adult salmon from several spawning populations were conducted in 1999 and 2000 to determine the extent of infection with P. minibicornis , when and where the parasite first becomes detectable during migration, and whether early migrating stocks might be used as sentinels to assess risk of infection in late-spawning stocks. Posterior kidney, preserved in 95% ethanol, was examined for P. minibicornis in stained histological sections and using a polymerase chain reaction (PCR) test. The prevalence of this parasite in all Fraser River sockeye salmon stocks examined was high (range 47–100% infected). In contrast, P. minibicornis was not detected in the fish tested from the two sockeye salmon stocks outside the Fraser River drainage in either 1999 or 2000. The parasite was also not detected histologically or by PCR in the kidney tissue of the fish from the Fraser River that were sampled in salt water or early during their freshwater migration up the river. These findings and the progression in the prevalence and intensity of infection as the fish from three stocks (early Stuart, Weaver Creek and Cultus Lake) were monitored over time, suggest salmon acquired the parasite either in the lower Strait of Georgia or in the lower Fraser River before the confluence of the Harrison River. In both 1999 and 2000 the parasite was present in all Fraser River sockeye salmon stocks sampled, which suggests that early Stuart salmon may be valuable as a sentinel stock for the presence of the parasite in later-spawning stocks.     

Habitat use of age 0 Alabama shad in the Pascagoula River drainage, USA

Mickle PF, Schaefer JF, Adams SB, Kreiser BR. Habitat use of age 0 Alabama shad in the Pascagoula River drainage, USA. Ecology of Freshwater Fish 2010: 19: 107–115. © 2009 John Wiley & Sons A/S
Abstract – Alabama shad ( Alosa alabamae ) is an anadromous species that spawns in Gulf of Mexico drainages and is a NOAA Fisheries Species of Concern. Habitat degradation and barriers to migration are considered contributing factors to range contraction that has left just the Pascagoula River drainage population in Mississippi. We studied juvenile life history and autecology in three rivers within the drainage. We collected fish, habitat and physicochemical data in three habitat types (sandbar, open channel and bank) from June to October 2004–2006. Sandbar habitat was favoured by smaller individuals early in the year. Catch per unit effort (CPUE) decreased through the summer as larger fish began occupying bank and open channel habitat. The most parsimonious model of abundance included year and river variables, while patterns of presence and absence were best explained by river, habitat type and physiochemical variables. While all three rivers in the drainage contained Alabama shad, fish were less abundant and had lower condition values in the Chickasawhay River. Earlier work suggested the Alabama shad may gradually move downstream towards the Gulf of Mexico in their first year. However, we found no evidence of this and captured large fish high in the drainage late in the year.     

Modelling the reestablishment of coho salmon (Oncorhynchus kisutch) in Klamath River tributaries after dam removal

The planned removal of four dams on the Klamath River (anticipated 2024) will be the largest river restoration effort ever undertaken on the planet. Dam removal will restore access to >50 km of the Klamath River mainstem for coho salmon, but mainstem habitat may not be suitable for rearing juvenile coho salmon. Instead, small tributaries may provide most rearing habitat for reestablishing coho salmon. We used four approaches to evaluate six Klamath River tributaries above existing dams to assess their potential to support juvenile coho salmon: (1) We measured summer temperature regimes and evaluated thermal suitability. (2) We applied an Intrinsic Potential (IP) model to evaluate large-scale geomorphological constraints on coho salmon habitat. (3) We used the Habitat Limiting Factors Model (HLFM) to estimate rearing capacity for juveniles given current habitat conditions. (4) We developed an occupancy model using data from reference tributaries to predict coho salmon rearing distribution. All six streams had summer temperatures cooler than the mainstem Klamath River. However, five of the streams have barriers that will restrict coho salmon to within 5 km of the confluence with the Klamath River and two were disconnected mid-summer. Despite these constraints, the tributaries will likely produce coho salmon. Most streams had high IP in their lower reaches, the HLFM model estimated a total capacity of 105,000 juvenile coho salmon, and the occupancy model predicted juvenile coho salmon will rear throughout the accessible reaches. Protection and habitat enhancement for these tributaries will be important for coho salmon reestablishment post-dam removal.     

Seasonal floodplain‐tidal slough complex supports size variation for juvenile Chinook salmon (Oncorhynchus tshawytscha)

Population diversity is a mechanism for resilience and has been identified as a critical issue for fisheries management, but restoration ecologists lack evidence for specific habitat features or processes that promote phenotypic diversity. Since habitat complexity may affect population diversity, it is important to understand how population diversity is partitioned across landscapes and among populations. In this study, we examined life history diversity based on size distributions of juvenile Central Valley Chinook salmon (Oncorhynchus tshawytscha) within the Yolo Bypass, a remnant transitional habitat from floodplain to tidal sloughs in the upper San Francisco Estuary (SFE). We used a generalized least squares model with an autoregressive (AR1) correlation structure to describe the distribution of variation in fish size from 1998 to 2014, and tested the effect of two possible drivers of the observed variation: (i) environmental/seasonal drivers within the Yolo Bypass, and (ii) the juvenile Chinook source population within the Sacramento River and northern SFE. We found that the duration of floodplain inundation, water temperature variation, season, and sampling effort influenced the observed time‐specific size distribution of juvenile Chinook salmon in the Yolo Bypass. Given the lack of seasonally inundated habitat and low thermal heterogeneity in the adjacent Sacramento River, these drivers of juvenile size diversification are primarily available to salmon utilizing the Yolo Bypass. Therefore, enhancement of river floodplain‐tidal slough complexes and inundation regimes may support the resilience of imperiled Central Valley Chinook salmon.     

Spawning distribution and abundance of a northern Chinook salmon population

Chinook salmon, Oncorhynchus tshawytscha (Walbaum), is an important biological and cultural resource in Alaska, but knowledge about Chinook salmon ecology is limited in many regions. From 2009 to 2012, spawning distribution and abundance of a northern Chinook salmon population on the Togiak River in south‐west Alaska were assessed. Chinook salmon preferred deeper mainstem channel spawning habitat, with 12% (14 of 118 tags in 2009) to 21% (22 of 106 tags in 2012) of radio‐tagged fish spawning in smaller order tributaries. Tributary spawners tended to have earlier run timing than mainstem spawners. Chinook salmon exhibited extended holding and backout (entering freshwater but returning to saltwater before completing anadromous migration) behaviours near the mouth of Togiak River, potentially prolonging their exposure to fishery harvest. Mark–recapture total annual run estimates (2010–2012) ranged from 11 240 (2011) to 18 299 (2012) fish. Exploitation of Chinook salmon ranged from 36% (2012) to 55% (2011) during the study period, with incidental fishery catches near the mouth of the river comprising the largest source of harvest.     

Return migration of adult Atlantic salmon, Salmo salar, in relation to water diverted through a power station

Abstract  The migration of Atlantic salmon, Salmo salar L., returning to the River Suldalslågen, Norway, was studied in relation to redirection of freshwater flow through a power station. The outlet of the power station is situated in the Hylsfjord, a fjord adjacent to the river mouth. Seventy-two salmon were tagged with acoustic transmitters, released in the outer part of the fjord system and automatically recorded when entering the Hylsfjord or the river. Data were collected during one period when the power station was running and two periods when the power station was closed. The release of water from the power station did not greatly attract the salmon during their return migration. Proportions of salmon entering the river or time from release to entering the river did not differ among salmon tagged in the different periods. The salmon were recorded in the Hylsfjord both when the power station was running and closed and there were no differences in number of times, number of days or hours recorded in the Hylsfjord among salmon tagged in the three periods. The only significant difference found among periods was duration of continuous stays in the inner part of the Hylsfjord. This may indicate a slight attraction to the freshwater release, but the difference seems small (1.8 vs. 0.7 h) compared with the time the fish stayed in the fjord system before entering the river (16–85 days).     

Reproductive success of Atlantic salmon (Salmo salar) mature male parr in a small river,the Nivelle: influence of shelters

Grimardias D, Merchermek N, Manicki A, Garnier J, Gaudin P, Jarry M, Beall E. Reproductive success of Atlantic salmon (Salmo salar) mature male parr in a small river, the Nivelle: influence of shelters.
Ecology of Freshwater Fish 2010: 19: 510–519. © 2010 John Wiley & Sons A/S Abstract – The breeding activity of a small population of Atlantic salmon (Salmo salar L.) was monitored on the Nivelle River in southwest France to estimate the overall contribution of mature male parr and the numbers involved in egg fertilisation. In the twelve redds sampled, 563 eggs were collected for parental assignment and the physical habitat was characterised to investigate the possible relationship between parr reproductive success and habitat complexity. The overall contribution of mature male parr was particularly high (87%, one of the highest estimates ever reported). Concerning habitat complexity, granulometry and shelter diversity were correlated with the number of parr breeders contributing to egg fertilisation in each redd. A complex habitat increased multiple paternity, which could affect the effective size and genetic variability of small salmon populations.     

Environmental conditions and physiological state influence estuarine movements of homing sockeye salmon

The reproductive migration of anadromous salmonids through estuarine waters is one of the most challenging stages of their life cycle, yet little is known about the environmental and physiological conditions that influence migratory behaviour. We captured, sampled tissues, tagged and released 365 sockeye salmon (Oncorhynchus nerka) homing through inner coastal waters towards the Fraser River, British Columbia, Canada. Biotelemetry was used to assess the behaviour of individual sockeye salmon approaching estuarine waters and at river entry, which were related to both fish physiological condition at release and to prevailing environmental conditions. Sockeye salmon tended to stay close to the shore, migrated during the day, and movements were related to tide. Sockeye salmon migration rate was linked to wind‐induced currents, salinity and an individual's physiological state, but these factors were specific to location and stock. We propose that wind‐induced currents exposed sockeye salmon entering the estuary to stronger olfactory cues associated with Fraser River water, which in turn resulted in faster migration rates presumably due to either an increased ability for olfactory navigation and/or advanced reproductive schedule through a neuroendocrine response to olfactory cues. However, once the migration had progressed further into more concentrated freshwater of the river plume, sockeye salmon presumably used wind‐induced currents to aid in movements towards the river, which may be associated with energy conservation. Results from this study improve our biological understanding of the movements of Fraser River sockeye salmon and are also broadly relevant to other anadromous salmonids homing in marine environments.     

The effects of fluvial processes and habitat heterogeneity on distribution, growth and densities of juvenile Atlantic salmon (Salmo salar L.), with consequences on abundance of the adult fish

Abstract – The required freshwater habitats of juvenile Atlantic salmon ( Salmo salar ) are, in general, well known, but vary in quality, related to interacting effects of several variables, which may depend on different parts of a river system. Examples are given of ranges of densities and growth that can be found at various sites in eastern Canada, illustrating the biological and physico-chemical factors affecting production of juvenile salmon. Relative growth rates can indicate habitat quality and population densities. Salmon parr have negative effects on brook trout in riffle habitats. The effects of migrations within the river and of changes with stream succession on juvenile salmon production are illustrated with examples from a Newfoundland river. Migration of age-classes can be quantified from 'self-thinning' curves. Lakes have enhancing effects on downstream fluvial habitats, and, at least in Newfoundland, and probably in many boreal areas, the lacustrine proportion of the basin can be used as an index for deriving estimates of required spawning escapement. The factors described should be taken into account for more refined estimates of river production and management of the salmon resource.     

Angling Success for Atlantic Salmon (Salmo salar) in the River Wye in Relation to Effort and River Flows

Salmon catch and effort data for 1977 from ten private fisheries on the River Wye are analysed and discussed. The 555 salmon caught represent 10.7% of the total Wye rod catch and the mean angling success rate of 0.045 ± 0.022 salmon per angler-hour, equivalent to about 22 h per salmon, compares favourably with that for other rivers in Britain and Canada. Over 75% of all salmon caught were 2 sea-winter fish, the age distribution of salmon caught in the sample being similar to those for the whole river. Angling success in the upper reaches during July and August may have been reduced by limited availability affected by water temperatures too high for migration, Flows most suitable for successful angling in each fishery are compared in relation to distance from the estuary and long-term average daily flows. Salmon appeared to be caught nearer the crest of a spate in the upper compared with the lower reaches of the river and this difference is discussed.     

Movement patterns of imperiled blue shiners (Pisces: Cyprinidae) among habitat patches

Abstract – The blue shiner ( Cyprinella caerulea ) is a federally threatened cyprinid that inhabits discrete habitat patches, but whether the fish in these patches represent distinct subpopulations or a continuous population is not known. Movement patterns of adult blue shiners among habitat patches in the Conasauga River (Tennessee and Georgia, USA) were investigated to determine if movement among patches was unrestricted, or if each patch represented a relatively discrete subpopulation. Movement was restricted to a small proportion of individuals at any given time, and most fish that moved did so between adjacent habitat patches. The average distance moved by blue shiners over the two study periods (1997 and 1998) was just 130.7 m. Riffle and glide mesohabitats were not barriers to the dispersal of blue shiners, and fish moved both upstream and downstream in approximately equal numbers. It is suggested that the fish that are mobile at a given time are responsible for recolonization of habitat patches via cumulative, stepwise movements between adjacent patches, and that intervening patches must be present to maintain connectivity of the entire population. Blue shiners exist as relatively discrete subpopulations in the Conasauga River. This finding emphasizes the importance of protecting habitat integrity throughout the entire course of the river to prevent isolation of subpopulations. This species may be used as a model for the conservation of other patch-restricted aquatic species. ^Note     

Quantifying the effectiveness of regional habitat quality index models for predicting densities of juvenile Atlantic salmon (Salmo salar L.)

Abstract –  The suitability of using regional Habitat Quality Index (HQI) models for predicting distributions of juvenile salmon ( Salmo salar L.) was examined using data acquired from selected rivers within Québec, Canada. Regional HQI models were derived by identifying preferences of salmon fry and parr for the habitat properties of flow velocity, water column depth and granulometric index (an index of substrate size) for groups of rivers. These were compared with local HQI models, derived from preferences for habitat properties within individual rivers. Relationships between HQI values and densities of juvenile salmon were established through the use of nonlinear regression. In all cases, the regional HQI models were less effective for explaining distributions of juvenile salmon than local HQI models based on individual rivers. Regional HQI models were relatively ineffective when the habitat characteristics of the river to which they were applied differed greatly from the characteristics of the other rivers within the region. It is inferred that the relationship between the effectiveness of the regional HQI model and the difference in characteristics between individual rivers and those of the region may be used in an a priori determination of whether a regional HQI may be applied effectively to any given river.