How fast is too fast? Water velocity differentially affects growth of four Gila River,native cyprinids

Understanding trade-offs associated with occupying various aquatic habitats provides a mechanistic understanding of habitat needs that can be used to evaluate the consequences of habitat loss or alteration. We used instream enclosures and field observations to identify how velocity affects the growth rates of four native species in the upper Gila River basin: longfin dace (Agosia chrysogaster) and speckled dace (Rhinichthys osculus), two species of no conservation concern, and loach minnow (Tiaroga cobitis) and spikedace (Meda fulgida), two federally endangered species. Elevated velocity was predicted to increase food delivery through drift or stimulation of benthic primary production. Energetic costs of high-velocity habitat were predicted to vary with morphology and behaviour and be lowest for speckled dace and loach minnow because they are adapted to occupy interstitial spaces of the substrate in riffles. Spikedace and longfin dace should perform best in moderate velocities, where the trade-off between exposure to drifting macroinvertebrates outweighs the energetic costs of maintaining position in the water column. Growth rates of loach minnow and speckled dace increased in higher velocities, but contrary to our initial predictions, spikedace growth rates also increased in high-velocity habitats while longfin dace grew fastest in low-velocity habitats; similar to the locations these species occupied based on field observations. These results indicate that for spikedace, the increased abundance of drifting macroinvetebrates in high-velocity habitats outweighs the energy expenditure, but for longfin dace the energetic costs of occupying moderate to high-velocity habitats outweigh the benefit to increased food availability. Our experiment provides a mechanistic understanding of habitat requirements across species and may inform predictions on how modifications or restoration of riverine ecosystems influence native fish diversity.     

Variability of fish densities in a small catchment

Abstract— Temporal and spatial variability of fish communities were examined within a 91-km² catchment in central New York over four years. Riffle-dwelling species, slimy sculpin Cottus cognatus , longnose dace Rhinichthys cataractae , and young-of-the-year brown trout Salmo trutta , were more strongly affected by flood and drought than pool-adapted species, adult brown trout, blacknose dace Rhinichthys atratulus , white sucker Catostomus commersoni , and creek chub Semotilus atromaculatus . Canonical correspondence analysis using seven abiotic variables (mean width, residual pool depth, water surface slope, mean Froude number, variance in Froude number, maximum monthly discharge and minimum monthly discharge) separated fish communities among sites and years. The first axis represented a headwater-to-valley gradient; the second axis reflected habitat complexity, based on both geomorphic and hydraulic features. Temporal differences in fish densities were related to hydrological factors. Fish communities throughout the catchment showed similar responses to flood and drought.     

Complex influences of low-head dams and artificial wetlands on fishes in a Colorado River tributary system

Abstract  Low-head dams in arid regions restrict fish movement and create novel habitats that have complex effects on fish assemblages. The influence of low-head dams and artificial wetlands on fishes in Muddy Creek, a tributary of the Colorado River system in the USA was examined. Upstream, fish assemblages were dominated by native species including two species of conservation concern, bluehead sucker, Catostomus discobolus Cope, and roundtail chub, Gila robusta Baird and Girard. The artificial wetlands contained almost exclusively non-native fathead minnow, Pimephales promelas Rafinesque, and white sucker, Catostomus commersonii (Lacepède). Downstream, fish assemblages were dominated by non-native species. Upstream spawning migrations by non-native white suckers were blocked by dams associated with the wetlands. However, the wetlands do not provide habitat for native fishes and likely inhibit fish movement. The wetlands appear to be a source habitat for non-native fishes and a sink habitat for native fishes. Two non-native species, sand shiner, Notropis stramineus (Cope), and redside shiner, Richardsonius balteatus (Richardson), were present only downstream of the wetlands, suggesting a beneficial role of the wetlands in preventing upstream colonisation by non-native fishes.     

Ontogenetic habitat shifts and habitat use in an endangered minnow, Notropis mekistocholas

Henderson AR, Johnston CE. Ontogenetic habitat shifts and habitat use in an endangered minnow, Notropis mekistocholas . Ecology of Freshwater Fish 2010: 19: 87–95.
© 2009 John Wiley & Sons A/S
Abstract –  Information on larval and juvenile habitat use is virtually absent for fishes. Our objective was to document habitat use of larval and juvenile Cape Fear shiners Notropis mekistocholas , an endangered species, in both natural and lab settings so that a better understanding of habitat requirements in all life stages can be achieved. We measured habitat parameters of areas used by all life stages of N. mekistocholas in the summers of 2007–2008 in the Rocky River, North Carolina. Field data suggests larvae use more shallow depths (mean = 31.6 cm) and reduced water velocities (mean = 0.02 m·s⁻¹) than adults (mean = 56.3 cm, 0.10 m·s⁻¹), and juveniles 15–25 mm often school with adults. Results of lab studies support field observations. In the mesolarval and metalarval stages N. mekistocholas were selective in their use of water velocity ( P  = 0.013) and depth ( P  = 0.001). In multiple juvenile stages, N. mekistocholas were selective for water velocity ( P  = 0.015), and depth ( P  < 0.001), choosing deeper depths and higher water velocities than larvae. These results demonstrate ontogenetic shifts in habitat use of N. mekistocholas and suggest that water velocity and depth are critical to successful recruitment for this species.     

Assemblage structure and habitat use of fishes in a Central European submontane stream: a patch-based approach

Abstract –  We examined macrohabitat patch level assemblage composition and habitat use patterns of fishes over four seasons in a second-order submontane stream (Danube drainage, Hungary). Rainfall data indicated that our study included both high- and low-water periods, and hence our results may be applicable to broader time scales. Principal component analysis of physical habitat data from 13 macrohabitat patches indicated that these patches represented a riffle-pool continuum. Correspondence analysis of fish assemblage structure data from these patches identified a continuum in assemblage composition that was positively correlated with the habitat continuum. The riffle fauna was dominated by stone loach ( Barbatula barbatula ), whereas chub ( Leuciscus cephalus ) were most abundant in pool patches. We detected little evidence of seasonality in either fish assemblage structure or habitat use. Fish density did not differ significantly among macrohabitat patches in two (summer and autumn 1999) of three seasonal samples, although riffle patches displayed significantly higher fish abundance in late spring 2000. This difference primarily was due to higher abundance of juvenile stone loach in riffles. Two species, stone loach and minnow ( Phoxinus phoxinus ), displayed generalized habitat use patterns, whereas chub and rare species (i.e., gudgeon, Gobio gobio ; dace, Leuciscus leuciscus ; Barbus petenyi ; and burbot, Lota lota ) were significantly over-represented in pool habitats. We hypothesized that pool specialists (i.e., chub and rare species) were responding primarily to the increased depth of these habitats. Nevertheless, our data did not demonstrate the presence of separate pool and riffle habitat guilds. In conclusion, we believe that our understanding of stream fish ecology will be greatly facilitated by use of a 'patch-based approach'.     

Evaluating relationships between native fishes and habitat in streams affected by oil and natural gas development

Oil and natural gas (ONG) development can affect aquatic ecosystems through water contamination, water withdrawals and disturbance of soil and vegetation (surface disturbance) from infrastructure development. Research on how these potential sources of watershed and aquatic ecosystem impairment can affect fish assemblages is limited. Fish–habitat relationships were evaluated across stream sites experiencing differing levels of ONG development. Colorado River cutthroat trout, Oncorhynchus clarkii pleuriticus (Cope), and mottled sculpin, Cottus bairdii Girard, presence and abundance were associated with habitat conditions predominantly found in the less disturbed streams, such as higher proportion of shrub cover, greater stream depths and gravel substrate. Mountain sucker, Catostomus platyrhynchus (Cope), appeared to be a habitat generalist and was able to persist in a wide range of conditions, including degraded sites. Natural resource managers can use habitat preferences of these fish species to establish the development plans that mitigate negative effects of ONG development by protecting the aquatic habitats they rely upon.     

Using occupancy models to assess the effectiveness of underwater cameras to detect rare stream fishes

1. Many conservation efforts for freshwater fishes have been undertaken; however, continuing the monitoring of both the distribution and the abundance of species to determine the effectiveness of these actions can be difficult. As species increase in rarity, they are more difficult to detect in the field, making inferences on occupancy less reliable.
2. Conventional sampling methods, such as electrofishing and seining, require the physical handling of rare fishes, which may cause stress and mortality and, consequently, compromise conservation goals and limit monitoring programmes. Non‐invasive surveillance methods, including underwater video, are playing an increasingly important role.
3. In this study, occupancy models were used to estimate the detection probability of underwater cameras as an alternative to the conventional sampling methods for rare stream fishes. Redside dace (Clinostomus elongatus), a small minnow listed as Endangered, was used as a model organism for rarity. A total of 69 historical redside dace sites were sampled using three sampling methods to determine the effect of gear type on detecting and identifying the habitat preferences of this rare minnow.
4. On average, using multiple underwater cameras is as effective at detecting a rare minnow as conventional sampling methods (backpack electrofisher and seine) and causes no harm.
5. The detection probability of both underwater cameras and backpack electrofishing were adversely affected by turbidity, whereas seining was positively affected by stream velocity. The probability of occupancy of redside dace is driven by open channels and sediment size, and this provides a strong basis for informing stream restoration projects.
6. The use of multiple underwater cameras over conventional sampling methods is recommended when sampling for rare and endangered minnows in systems with low turbidity.

     

Potential population and assemblage influences of non‐native trout on native nongame fish in Nebraska headwater streams

Non‐native trout are currently stocked to support recreational fisheries in headwater streams throughout Nebraska. The influence of non‐native trout introductions on native fish populations and their role in structuring fish assemblages in these systems is unknown. The objectives of this study were to determine (i) if the size structure or relative abundance of native fish differs in the presence and absence of non‐native trout, (ii) if native fish‐assemblage structure differs in the presence and absence of non‐native trout and (iii) if native fish‐assemblage structure differs across a gradient in abundances of non‐native trout. Longnose dace Rhinichthys cataractae were larger in the presence of brown trout Salmo trutta and smaller in the presence of rainbow trout Oncorhynchus mykiss compared to sites without trout. There was also a greater proportion of larger white suckers Catostomus commersonii in the presence of brown trout. Creek chub Semotilus atromaculatus and fathead minnow Pimephales promelas size structures were similar in the presence and absence of trout. Relative abundances of longnose dace, white sucker, creek chub and fathead minnow were similar in the presence and absence of trout, but there was greater distinction in native fish‐assemblage structure between sites with trout compared to sites without trout as trout abundances increased. These results suggest increased risk to native fish assemblages in sites with high abundances of trout. However, more research is needed to determine the role of non‐native trout in structuring native fish assemblages in streams, and the mechanisms through which introduced trout may influence native fish populations.     

Turbidity, velocity and interspecific interactions affect foraging behaviour of rosyside dace (Clinostomus funduloides) and yellowfin shiners (Notropis lutippinis)

Abstract –  Fish diversity is strongly affected by habitat degradation (e.g., increased turbidity) and invasive species. We examined the effects of turbidity, velocity, length, dominance and intra- and interspecific competition on focal point depth, movement rate, dominance and aggression rate in native rosyside dace ( Clinostomus funduloides ) and invasive yellowfin shiners ( Notropis lutipinnis ) in a southern Appalachian stream (NC, USA). We compared results for intra- and interspecific groups of fishes at two densities (two and four fishes), three turbidity levels (10, 20 and 30 nephelometric turbidity units), and two velocities (12, 18 cm·s⁻¹). Dominance was significantly correlated with length in intraspecific groups of both species, and dominant fish held more profitable foraging positions about 75% of the time. Yellowfin shiners were dominant more often than rosyside dace in interspecific trials. Akaike's Information Criterion indicated that models containing turbidity, velocity, species and intraspecific competition, explained the greatest amount of information in focal point depth data. By contrast, movement and aggression rates were best explained by models based on dominance and velocity. Finally, aggression rate was best explained by models containing fish length and turbidity. These results indicate that habitat degradation, intra- and interspecific interactions influence the foraging behaviour and future success of these species in the Little Tennessee River drainage.     

Underwater evaluation of habitat partitioning in a European river between a non‐native invader,the racer goby and a threatened native fish,the European bullhead

We conducted underwater surveys using SCUBA gear to examine habitat and microhabitat competition between the Ponto‐Caspian racer goby Babka gymnotrachelus and native European bullhead Cottus gobio to assess the potential for competitive displacement of the native species by the invading species. In summer, 88 surveys were made in a tributary of the River Vistula within defined benthic areas across the entire width of the river bed. The occurrence of fish by total length class (small: <6 cm; large: >6 cm) and environmental conditions (depth, water velocity, substratum type, plant cover, shelter type) was recorded. We found a substantial separation between the species and size classes in relation to substratum, shelter type and water velocity. European bullheads were limited to lotic areas with stony bottoms, whereas racer gobies also occupied lentic areas over sand or mud. European bullheads usually took refuge under stones in contrast to a wider range of shelters used by racer goby, including tree roots and rubbish. In general, the breadth of habitat used by the racer goby was wider than that of the European bullhead, although habitat overlap between the species was not statistically significant except for the type of shelter occupied by small fish, selecting smaller stones. An inverse relationship was observed between small European bullheads and all racer gobies in areas where they co‐occurred, suggesting that invader may be having an adverse effect on the distribution and habitat use of small native bullheads, particularly in areas of moderate water velocities over small stones and gravel.     

Seasonal habitat use by brook trout,Salvelinus fontinalis (Mitchill), in a second-order stream

Abstract Seasonal habitat use by over-yearling and under-yearling brook trout, Salvelinus fontinalis (Mitchill), was examined in a second-order stream in north-central Pennsylvania, USA. The habitat occupied by brook trout and available habitat were determined in a 0.5-km stream reach during the spring, summer and autumn of 1989 and the spring and summer of 1990. Cover, depth, substrate and velocity were quantified from over 2000 observations of individual brook trout. Habitat used by under-yearling brook trout was more uniform between seasons and years than that used by over-yearling brook trout. Over-yearling brook trout occupied areas with more cover and greater depth than did under-yearling brook trout, suggesting ontogenetic shifts in these variables. Differences for velocity and substrate were not as great as those for cover and depth. The selection of areas with low water velocities governed trout habitat use in spring, whereas cover and depth were the most important habitat variables in summer and autumn. Principal component analysis showed that available habitat and trout habitat centroids diverged most in spring, indicating that habitat selection by brook trout may be greatest at this time.     

Habitat use by an endangered riverine fish and implications for species protection

We investigated habitat specificity of the amber darter (Percina antesella Williams & Etnier 1977), an imperiled fish from restricted portions of 2 rivers in the southeastern United States. Foraging amber darters occupied a narrow range of riffle habitat, consistently avoiding areas < 20 cm deep and with velocity < 10 cm. s^?1 near the substrate, occupying areas with cobble or gravel substrate and average water-column velocity of 30 to 70 cm. s^?1. During low to mo'derate flows, approximately 20% or more of the study areas contained suitable habitat for the species. Amber darters appeared rare, and the numbers of individuals were uncorrelated with the concurrent availability of suitable habitat. Protecting the amber darter may require more than maintaining adequate depths and velocities over gravel-cobble substrates. Until we understand the potential importance of migration and dispersal for maintaining small populations, suitable habitat should be maintained over the longest contiguous stream segments possible.     

Spatial niche variability for young Atlantic salmon (Salmo salar) and brown trout (S. trutta) in heterogeneous streams

Abstract– Habitat is important in determining stream carrying capacity and population density in young Atlantic salmon and brown trout. We review stream habitat selection studies and relate results to variable and interacting abiotic and biotic factors. The importance of spatial and temporal scales are often overlooked. Different physical variables may influence fish position choice at different spatial scales. Temporally variable water flows and temperatures are pervasive environmental factors in streams that affect behavior and habitat selection. The more frequently measured abiotic variables are water depth, water velocity (or stream gradient), substrate particle size, and cover. Summer daytime, feeding habitats of Atlantic salmon are size structured. Larger parr (>7 cm) have a wider spatial niche than small parr. Selected snout water velocities are consistently low (3–25 cm. s^?1). Mean (or surface) water velocities are in the preferred range of 30–50 cm. s^?1, and usually in combination with coarse substratum (16–256 mm). However, salmon parr demonstrate flexibility with respect to preferred water velocity, depending on fish size, intra- and interspecific competition, and predation risk. Water depth is less important, except in small streams. In large rivers and lakes a variety of water depths are used by salmon parr. Summer daytime, feeding habitat of brown trout is also characterized by a narrow selection of low snout water velocities. Habitat use is size-structured, which appears to be mainly a result of intraspecific competition. The small trout parr (<7 cm) are abundant in the shallow swift stream areas (<20–30 cm depths, 10–50 cm. s^?1 water velocities) with cobble substrates. The larger trout have increasingly strong preferences for deep-slow stream areas, in particular pools. Water depth is considered the most important habitat variable for brown trout. Spatial niche overlap is considerable where the two species are sympatric, although young Atlantic salmon tend to be distributed more in the faster flowing and shallow habitats compared with trout. Habitat use by salmon is restricted through interspecific competition with the more aggressive brown trout (interactive segregation). However, subtle innate differences in behavior at an early stage also indicate selective segregation. Seasonal changes in habitat use related to water temperatures occur in both species. In winter, they have a stronger preference for cover and shelter, and may seek shelter in the streambed and/or deeper water. At low temperatures (higher latitudes), there are also marked shifts in habitat use during day and night as the fish become nocturnal. Passive sheltering in the substrate or aggregating in deep-slow stream areas is the typical daytime behavior. While active at night, the fish move to more exposed holding positions primarily on but also above the substrate. Diurnal changes in habitat use take place also in summer; brown trout may utilize a wider spatial niche at night with more fish occupying the shallow-slow stream areas. Brown trout and young Atlantic salmon also exhibit a flexible response to variability in streamflows, wherein habitat selection may change considerably. Important topics in need of further research include: influence of spatial measurement scale, effects of temporal and spatial variability in habitat conditions on habitat selection, effects of interactive competition and trophic interactions (predation risk) on habitat selection, influence of extreme natural events on habitat selection use or suitability (floods, ice formation and jams, droughts), and individual variation in habitat use or behavior.     

Defining critical habitat conditions for the conservation of three endemic and endangered cyprinids in a Mediterranean intermittent river before the onset of drought

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Do instream habitat variables and the abundance of brown trout Salmo trutta (L.) affect the distribution and growth of stone loach,Barbatula barbatula (L.)?

Abstract –  Along a stream, we investigated whether the abundance of stone loach ( Barbatula barbatula , L.) was related to the presence of brown trout ( Salmo trutta , L.) and instream habitat variables. First, a field survey was carried out where different habitat variables and the densities of both species were quantified and subjected to principal components analysis. Then the abundance of stone loach was related to the scores of the retained axes (eigenvalues >1). The abundance of stone loach was positively correlated to substrate particle size, amount of shade, temperature, discharge and current velocity, but negatively correlated to brown trout abundance. Secondly, a month-long field enclosure experiment in a stream was performed to test for any negative effects of brown trout on stone loach growth. Four treatments were used: intraspecific competition (stone loach at double density), interspecific competition (stone loach + small trout), predation (stone loach + large trout) and a control (stone loach alone). The results showed that large trout tended to have negative effects on final stone loach biomass. The absence of a negative effect of large trout on resource density suggests that nonlethal effects rather than resource competition caused this trend.     

Habitat associations of the Threatened pugnose minnow (Opsopoeodus emiliae) at the northern edge of the species range

Pugnose minnow (Opsopoeodus emiliae) is a small, reclusive species that is widespread in North America, but is one of the rarest fishes in Canada, found in less than 12 known localities in southwestern Ontario. In contrast to most pugnose minnow populations across the global range, Canadian populations are primarily found in turbid systems, potentially indicating persistence in suboptimal conditions. We used data from a multi-gear species and habitat survey in the Canard River, Ontario, a system dominated by agricultural inputs and the best-known capture site of the species in Canada, to parameterise multi-gear occupancy models for understanding the relationship between pugnose minnow occupancy and microhabitat features, including the role of turbidity. Almost 300 pugnose minnow were captured, representing the largest single collection of the species in Canadian history. The best occupancy model indicated that the probability of pugnose minnow occupancy was highest in the deepest sites with the lowest water clarity (i.e. high turbidity); however, competing models suggested that occupancy was highest at sites with wild celery (Vallisneria americana) and higher water clarity, signifying that habitats with low turbidity may be utilised if sufficient physical cover exists. Together, our results suggest that Canadian pugnose minnow populations occupy and potentially favour turbid conditions, possibly to avoid visual predators in clearer habitats. It remains uncertain whether this abiotic association represents a long-term, viable, local adaptation or whether persistence of pugnose minnow in the Canard River is at risk unless significant water quality improvements can be made.     

River modification reduces climate resilience of brown trout (Salmo trutta) populations in Ireland

This study investigated interactions between eco‐hydromorphological state, riparian vegetation cover, water temperature and fish community composition in lowland rivers in Ireland. Physical habitat modification of study sites corresponded with degraded eco‐hydromorphological state (degree of ecological and physical modification) and reduced thermal buffering capacity (greater temperature fluctuation and increased frequency of extreme temperature events). This impact was reflected in the fish community, with a shift from a brown trout‐dominated (Salmo trutta L.) fish assemblage to predominance of the more thermally plastic minnow, Phoxinus phoxinus (L.), and stone loach, Barbatula barbatula (L.). Eco‐hydromorphological state may be a central factor affecting the ability of temperate rivers to resist temperature change in a warming climate and to maintain suitable conditions for salmonids and other cold‐water biota. Strategies aimed at climate change proofing of temperate rivers should focus on preserving or re‐establishing the eco‐hydromorphological processes that create habitat complexity and buffer stream temperature.     

Beaver dams shift desert fish assemblages toward dominance by non‐native species (Verde River,Arizona, USA)

The reintroduction of beaver (Castor canadensis) into arid and semi‐arid rivers is receiving increasing management and conservation attention in recent years, yet very little is known about native versus non‐native fish occupancy in beaver pond habitats. Streams of the American Southwest support a highly endemic, highly endangered native fish fauna and abundant non‐native fishes, and here we investigated the hypothesis that beaver ponds in this region may lead to fish assemblages dominated by non‐native species that favour slower‐water habitat. We sampled fish assemblages within beaver ponds and within unimpounded lotic stream reaches in the mainstem and in tributaries of the free‐flowing upper Verde River, Arizona, USA. Non‐native fishes consistently outnumbered native species, and this dominance was greater in pond than in lotic assemblages. Few native species were recorded within ponds. Multivariate analysis indicated that fish assemblages in beaver ponds were distinct from those in lotic reaches, in both mainstem and tributary locations. Individual species driving this distinction included abundant non‐native green sunfish (Lepomis cyanellus) and western mosquitofish (Gambusia affinis) in pond sites, and native desert sucker (Catostomus clarkii) in lotic sites. Overall, this study provides the first evidence that, relative to unimpounded lotic habitat, beaver ponds in arid and semi‐arid rivers support abundant non‐native fishes; these ponds could thus serve as important non‐native source areas and negatively impact co‐occurring native fish populations.     

Post-spawn movements and habitat use by greater redhorse, Moxostoma valenciennesi

Abstract – A combination of radio telemetry and surface observations were used to characterize the movements and habitats of greater redhorse, Moxostoma valenciennesi , after spawning in the Grand River, Ontario, Canada. This river supports a large population of greater redhorse that migrate upstream in the spring to spawn on riffles. After spawning, greater redhorse moved as far as 15.2 km downstream of spawning areas and maintained summer home ranges in low velocity runs. Mean (±SE) water depth used by greater redhorse was 46.3±0.9 cm, and water velocities were less than 5 cm/s. Greater redhorse were usually located over cobble/gravel substrates that were covered with Cladophora. Although interspecific associations with golden redhorse, M. erythrurum, common carp, Cyprinus carpio , smallmouth bass, Micropterus dolomieu , and northern hog sucker, Hypentelium nigricans , were observed, most greater redhorse associated with conspecifics. Areas and habitat types used throughout the summer did not change, until relocation to overwintering areas occurred in early autumn.