Evaluation of benthic nutrient fluxes and their importance in the pelagic nutrient cycles in Suo Nada,Japan

ABSTRACT:   The benthic nutrient fluxes in Suo Nada, in the western part of Seto Inland Sea, Japan were estimated seasonally in 2002, and their contribution to the pelagic nutrient cycle was evaluated. The horizontal distributions of inorganic phosphorus (DIP), ammonia and dissolved silica (DSi) concentrations in the pore water of the surface (0–3 cm) sediments were high in the western part, indicating a eutrophic condition relative to the other parts. Seasonally, the highest nutrient concentration in the pore water was observed in summer, as reflected by the increasing decomposition rate of organic matter. Multiple regression analyses revealed significant positive effects of acid volatile sulfide (AVS) and temperature on the DIP flux and also significant positive effects of ignition loss (IL) along with these two parameters on the dissolved inorganic nitrogen (DIN) flux. Temperature, IL and redox potential (Eh) were effective on DSi. The estimated DIP, DIN and DSi fluxes from the sediments were relatively high or equivalent to the total inputs from rains and rivers in annual average, with high values in summer of 2–3-fold higher than the other sources (rain plus rivers). Thus, it is concluded that the benthic nutrient fluxes play an important role in the pelagic nutrient cycle of the Suo Nada ecosystem.     

Development of a quantification assay for the cysts of the toxic dinoflagellate <Emphasis Type="Italic">Alexandrium tamarense</Emphasis> using real-time polymerase chain reaction

ABSTRACT:   The cysts of toxic dinoflagellate Alexandrium tamarense are the seed population for the bloom responsible for paralytic shellfish poisoning (PSP). However, it is impossible to identify the Alexandrium spp. cyst on the basis of morphological features. In this study, we prepared A. tamarense cysts by sexual conjugation in laboratory conditions and developed an efficient DNA extraction method for polymerase chain reaction (PCR) assay. Using the A. tamarense cysts, we established the identification and quantification method showing the species specificity and the high sensistivity for A. tamarense cysts using real-time PCR. This assay was also able to detect and quantify the A. tamarense cysts accurately when mixed with excess cysts of A. catenella (Whedon and Kofoid) Balech prepared by conjugation experiment.     

Elemental analysis of otoliths of Japanese anchovy: trial to discriminate between Seto Inland Sea and Pacific stock

The ability to discriminate local stocks of Japanese anchovy Engraulis japonicus was assessed based on data from four elements (K, Na, P, and Sr) using an electron probe micro analyzer (EPMA) and data from three elements (Ba, Mn, and Sr) using inductively coupled plasma mass spectrometry (ICP-MS) from the otoliths of 40 anchovy (23.6–47.0 mm body length). Anchovy were caught at three sites (Aki-nada, Hiuchi-nada, and Osaka Bay) in the Seto Inland Sea, and one site (Kuroshio extension) in the Pacific Ocean in 2002. In order to discriminate different spawning grounds, EPMA data from the core portion (from core to 30 μm in the core-posterior axis) were used. Results showed that it was difficult to discriminate between the Seto Inland Sea and the Pacific anchovy by EPMA data. Conversely, it was possible to discriminate between the Seto Inland Sea and the Pacific anchovy by ICP-MS data from bulk otoliths. Our results showed that Mn contents of otoliths using ICP-MS discriminate between spawning grounds most, and Ba and Sr discriminate less. The difference in elemental compositions in anchovy otoliths between the Seto Inland Sea and the Pacific Ocean might be reflected by cumulative experienced elemental composition of ambient sea water during life history between the Seto Inland Sea and the Pacific anchovy.     

Interannual decrease in condition factor of the western sand lance Ammodytes japonicus in Japan in the last decade: Evidence for food‐limited decline of the catch

Annual catch of the western sand lance Ammodytes japonicus in the eastern Seto Inland Sea, Japan, has shown a decreasing trend since the 1990s. To examine whether food shortage was the main cause for the catch decrease, we investigated the condition factor of the age‐0 fish at the beginning of the estivation period (late July) in Harima‐Nada, eastern Seto Inland Sea, for 10 years from 2008 to 2017. The mean abundance of copepods as food for the age‐0 fish during the fish growth period (from February to June) around the estivation area was also determined. The condition factor showed a significant decrease, and values for 2011 and later years were mostly lower than the known minimum threshold (4.2) for maturation. In the recent 4 years from 2013 to 2016, the mean copepod abundance was much lower than values for the other years. The condition factor showed a significant positive correlation with the copepod abundance. These results indicate that decline of western sand lance catch after 1990 was caused mainly by food shortage.     

Seasonal variations in phytoplankton productivity in a shallow cove in the eastern Seto Inland Sea,Japan

Fisheries Science - We examined phytoplankton productivity in Shido Bay, an active oyster farming area in the eastern Seto Inland Sea, Japan, by an in situ 13C method from March 2016 to January...     

Feeding ecology of dominant demersal fish species <Emphasis Type="Italic">Favonigobius gymnauchen,Repomucenus</Emphasis> spp. and <Emphasis Type="Italic">Tarphops oligolepis</Emphasis> at a sandy beach where larval Japanese flounder settle in the Seto Inland Sea,Japan

ABSTRACT:   Feeding habits of Favonigobius gymnauchen , Repomucenus spp. and Tarphops oligolepis were examined during the period from May to August in 1999, 2000 and 2001 at a sandy beach in the central Seto Inland Sea, Japan. The three species of fish accounted for more than 60% of all fish collected in terms of number of individuals. All three species mainly consumed small crustaceans. However, the major prey of F .  gymnauchen and Repomucenus spp. differed from that of T .  oligolepis . F .  gymnauchen and Repomucenus spp. mainly consumed mysids and small crangonid shrimp (<12 mm in body length), which predominated in the study area. T .  oligolepis actively selected only epifaunal mysids Nipponomysis ornata and avoided crangonid shrimp and gammarids . The frequencies of occurrence of fish in the guts of the three dominant species were very low, and larval and juvenile Japanese flounder were not observed in any of the three fish species. The diet of juvenile Japanese flounder was similar to that of the three species. From these results, it appears that these three fish are competing species for the flounder.     

Utilization of dissolved organic phosphorus by the two toxic dinoflagellates, Alexandrium tamarense and Gymnodinium catenatum (Dinophyceae)

ABSTRACT: The utilization of dissolved organic phosphorus (DOP) by the two toxic dinoflagellates Alexandrium tamarense (Lebour) Balech and Gymnodinium catenatum Grahamm which were isolated from Hiroshima Bay, Japan, was studied. Alexandrium tamarense grew poorly on fructose-6-phophate, glucose-1-phosphate, glycerophosphate, and ribose-5-phosphate with a phosphomonoester bond, although it grew well on the nucleotides adenosine-5-diphosphate (ADP) and adenosine triphosphate (ATP), as well as on dissolved inorganic phosphorus (DIP; as metaphosphate, pyrophosphate, tripolyposphate and orthophosphate). The results imply that A. tamarense was able to utilize DOP and DIP from ambient water using nucleotidase, pyrophosphatase and poly-phosphatase, which hydrolyze phosphodiesters. In contrast, G. catenatum was able to utilize DOP compounds of various molecular weights and structures as well as DIP. In time-course experiments, alkaline phosphatase activity (APA) was induced at orthophosphate concentrations of 0.43 mmol/L and 3.3 mmol/L for A. tamarense and G. catenatum , respectively, and APA increased with orthophosphate depletion. The experiments also demonstrated that APA was maximum at the optimum temperatures for the growth of A. tamarense and G. catenatum ; that is, 15°C and 25°C, respectively. These results suggest that the DIP-depleted conditions in Hiroshima Bay might have led to the outbreaks of noxious dinoflagellates in recent years.     

Comparison of environmental conditions in two representative oyster farming areas: Hiroshima Bay,western Japan and Oginoham a Bay (a branch of Ishinomaki Bay), northern Japan

ABSTRACT:   Sea water environmental conditions over annual cycles were investigated and compared between two oyster farming areas, western Hiroshima Bay and Oginohama Bay (a branch of Ishinomaki Bay) in Miyagi Prefecture, to appropriately manage oyster culture or more efficiently utilize farming areas. The environmental parameters of temperature, salinity, nutrient concentrations (NO₂–N, NO₃–N, NH₄–N, PO₄–P, and SiO₂–Si) and size-fractionated chlorophyll- a (<0.2, 2–20, >20µm), and abundances of microzooplankton were measured in each bay at the surface, and 2 and 5 m depth layers. Differences in the annual mean values and results with monthly paired Student's t -tests showed that salinity was lower, and temperature, nutrient (especially PO₄–P) and chlorophyll- a concentrations, and abundance of microzooplankton, were higher in Hiroshima Bay than in Oginohama Bay. Differences in environmental conditions between inshore and offshore areas of each bay suggest that inflows of river water in western Hiroshima Bay and sea water from offshore had the most significant effects on the environmental conditions. It is concluded that such oceanographic and biological differences strongly affect the oyster farming system, especially regarding the optimum usage of offshore areas in Summer under clean, cold and stable seawater conditions, rather than food quantity in Hiroshima Bay, and under more abundant food conditions in Oginohama Bay.     

Occurrence and distribution of larval and juvenile Japanese flounder Paralichthys olivaceus at sandy beaches in eastern Hiuchi-Nada, central Seto Inland Sea, Japan

ABSTRACT:   The occurrence and distribution of larval and juvenile Japanese flounder Paralichthys olivaceus and major demersal fish from May to September were examined at seven sandy beaches at the central Seto Inland Sea. The flounder appeared from late May to August and were mainly collected at a depth of 2–5 m. Settlement of larval flounder was seen from late May to late June. A total of 6412 individuals of 17 species representing 12 families were collected in the study area. The dominant fish species were Favonigobius gymnauchen (56.0%), Tarphops oligolepis (8.1%), Rudarius ercodes (7.8%), P. olivaceus (7.3%), Repomucenus spp. (7.0%) and Heteromycteris japonica (3.3%). The catches of flounder differed among beaches and months. The number of flounder in June at Ohama Beach, where the most flounder were collected, was 22.6 individuals per haul (400 m²). The density of the flounder correlated negatively to that of F. gymnauchen .     

Food organisms and feeding habits of larval and juvenile Japanese flounder Paralichthys olivaceus at Ohama Beach in Hiuchi-Nada, the central Seto Inland Sea, Japan

ABSTRACT:   The abundance of food organisms and feeding habits of larval and juvenile Japanese flounder were examined during the period from May to August in 1999, 2000 and 2001 at the sandy Ohama beach, the central Seto Inland Sea. The food organisms collected with a sledge net consisted of 40 families from 18 orders, dominated by mysids, crangonids and gammarids. The mean densities of mysids, crangonid shrimp ( Crangon spp.), gammarids and fish were 2.74, 6.74, 2.91 and 0.15 individuals/m², respectively. The main prey of the flounder ( n  = 202; range of total length 9.80–75.95 mm) was mysids and small crangonid shrimp (<14 mm in body length). Prey fish availability was low, as the density of fish was low. The small crangonid shrimp was abundant, and the large crangonid shrimp, which could prey on larval flounder, was not abundant. The crangonid shrimp was important not as a predator for the flounder but as prey. The flounder preferred epifaunal mysids, Nipponomysis ornata and Anisomysis ijimai , to sand-burrowing mysids, Iiella oshimai , and avoided crangonid shrimp.     

Spawning grounds of red sea bream in the east Seto Inland Sea

We surveyed the distribution of red sea bream eggs between 2006 and 2010 in the east Seto Inland Sea to determine the location of the spawning grounds and the characteristics of preferred spawning habitats. We identified early-development stage red sea bream eggs using a monoclonal antibody assay. The early-development stage eggs were present in waters around Awaji Island (AW area) and around Ieshima Island, Shodo Island, and Bisan Seto (collectively the ISB area). The mean red sea bream egg density in the AW area was not significantly different from that in the ISB area. Based on the locations where we observed early-development stage eggs and the density of eggs, the ISB and AW areas appeared to be the primary spawning grounds in the east Seto Inland Sea during the survey period. A quotient analysis suggested that spawning fish had clear preferences for physical conditions. The areas suitable for spawning appear to be those with sandy substrate at a depth of 30–70 m. The temperature range suitable for spawning was between 16.5 and 21.5 °C.     

Relationship between daily survival rates of larval Japanese anchovy (Engraulis japonicus) and concentrations of copepod nauplii in the Seto Inland Sea, Japan

We attempted to estimate the survival rates of larval cohorts (3–15 mm in body length) of the Japanese anchovy Engraulis japonicus population in Hiuchi‐nada, Seto Inland Sea, Japan, and examined the relationship to their food availability. The survival rates were directly calculated from the change in larval density during the survey. The estimated daily survival rate ranged between 0 and 89% d⁻¹, but increased with the increase in the mean concentration of small‐sized copepod nauplii (<100 μm in body length) sampled at 10 m depth. When the food concentration was higher than about 5 nauplii L⁻¹, the daily survival rate of larval anchovy reached an asymptote of approximately 89% day⁻¹. It might be possible to provide a framework for the forecast for larval abundance immediately prior to recruitment size (10–15 mm SL), based on larval abundance of the monitored size (3–8 mm SL) and the survival rate which is estimated from the concentration of small‐sized nauplii.     

Fortification of <Emphasis Type="Italic">niboshi</Emphasis> with histidine prepared from <Emphasis Type="Italic">katsuobushi</Emphasis> protein digest

ABSTRACT:   Free and total histidine contents in the muscle of various fishes and invertebrates caught in the Seto Inland Sea were estimated. These contents were higher in the muscles from skipjack, yellowfin tuna, yellowtail and mackerel than in those from lizard fish, sea bream and hairtail. Invertebrate muscles, except squid, contained low free and total histidine. Boiled and dried anchovy ( niboshi ) contained lower free histidine than that of dried anchovy (suboshi). To prepare free histidine-rich extracts, the waste residue of soup stock from smoke-dried and shaved skipjack ( katsuobushi ) was digested with proteases. The extract of the enzyme digest contained high free histidine and was used to fortify niboshi with free histidine. If taken, the fortified niboshi may suppress food intake, and prevent obesity.     

Natural growth of juveniles of the sea cucumber <Emphasis Type="Italic">Apostichopus japonicus</Emphasis>: studying juveniles in the intertidal habitat in Hirao Bay,eastern Yamaguchi Prefecture,Japan

In order to determine the population dynamics of juvenile Apostichopus japonicus, successive surveys were conducted in the stony intertidal zone of Hirao Bay, Seto Inland Sea. The juveniles of the green and black types of this species grew well from January to June. Before this high growing season, zero year old juveniles were too small to be readily detected by visual observations during field surveys. During the high water temperature season from August to November, juveniles over 1 year of age estivated underneath rocks. They awakened from their estivation in November, and it took another month before they could eat and discharge. The juveniles mainly migrated from the intertidal zone before they reached 3 years of age. In the present work, three patterns of juvenile growth were found. It is suggested that these differences in juvenile growth are mainly caused by differences in their start times for growth initiation when they are zero years old.     

A numerical analysis of population dynamics of the sand lance (Ammodytes personatus) in the eastern Seto Inland Sea, Japan

The Japanese sand lance (Ammodytes personatus) population in the Seto Inland Sea shows large fluctuations every few years. Its recruitment to the fishery resources is much more dependent on the survival rate of 0-age fish than is the case for other fish species because 0-age fish directly recruit to next-year spawning adults. Since the 0-age fish population depends on its larval population, which is easily influenced by natural and human impacts, high larval mortality due to predation by adults and high dispersion of larvae by wind-driven currents from spawning grounds to other locations can have very important effects on stock fluctuations. A numerical model of population dynamics of the sand lance in the eastern Seto Inland Sea was developed that focuses on wind-induced transport and adult predation of the larvae. The model successfully simulated the two-year periodic fluctuation and was consistent with actual fluctuations in fishery catches. It suggests that the various coefficients given in the model are appropriate to explain the actual population dynamics of the sand lance. The model shows that adult predation on the larvae plays a very important role in the two-year periodic fluctuation, and the maximum predation rate is estimated to be ten individuals per day. Wind-induced transport modifies the impact of this predation. Variances in the two-year periodic fluctuation become smaller with weaker westerly wind velocity. The appropriate transport rates from Bisan Strait and the Harima-nada Sea are estimated to be 0.04 d^-1 and 0.01 d^-1, respectively.     

Lineage specific detection of the scaly form of the pen shell <Emphasis Type="Italic">Atrina</Emphasis> spp. by a loop-mediated isothermal amplification method

Taxonomy of the pen shell (genus Atrina) in East Asia has been confused because of the plasticity of the shell morphology and lack of unified morphological characteristics. We analyzed the mitochondrial cytochrome c oxidase subunit I (COI) sequence of the pen shell sampled from Ariake Bay and Seto Inland Sea, western Japan. All individuals were identified as the scaly form based on external morphology; however, their COI sequences were comprised of two distinct lineages. The sequence divergence between the two was 8.3%, indicating the high possibility that they are different species. The scaly form of the pen shell in Japan is one of the target species for resource enhancement, therefore COI lineage identification of broodstock individuals is critically important to avoid producing hybrid seed. We developed a loop-mediated isothermal amplification method that enables specific detection of the two lineages. This method can contribute to reducing the cost and time required for genotyping broodstock individuals prior to seed production.     

Daily rations and food availability of Japanese flounder Paralichthys olivaceus,small flounder Tarphops oligolepis and sand goby Favonigobius gymnauchen at a sandy beach in the central Seto Inland Sea,Japan

ABSTRACT:     To estimate the daily rations of Paralichthys olivaceus , Tarphops oligolepis and Favonigobius gymnauchen and to clarify diel variation in food availability to them, diel sampling was conducted over a 24-h period at a sandy beach in the Seto Inland Sea, Japan. The mean total length and body weight (BW) of P. olivaceus , T. oligolepis and F. gymnauchen were 32.6 mm (0.35 g), 23.7 mm (0.13 g) and 50.2 mm (1.03 g), respectively. The mean stomach contents index and percentages of stomachs with food were high during the day but low at night, indicating that these species are day-feeders. Paralichthys olivaceus and F. gymnauchen consumed mainly mysids and crangonids, whereas T. oligolepis fed chiefly on mysids. The estimated mean daily rations (95% confidence intervals) for P. olivaceus , T. oligolepis and F. gymnauchen made with the bootstrap method were 18.1 (9.3–31.3)%BW, 13.2 (7.9–24.3)%BW and 3.7 (1.7–7.4)%BW, respectively. Mysids were more abundant in the near-bottom layer during the day than at night, but the opposite was true for crangonids.     

The food habits of four species of triakid sharks, Triakis scyllium, Hemitriakis japanica, Mustelus griseus and Mustelus manazo, in the central Seto Inland Sea, Japan

ABSTRACT:   The food habits of 595 houndsharks of four species, Triakis scyllium ( n  = 179, 42–148 cm total in length), Hemitriakis japanica ( n  = 57, 42–102 cm), Mustelus griseus ( n  = 193, 39–100 cm), and Mustelus manazo ( n  = 166, 43–120 cm), found in the central Seto Inland Sea, Japan, from March 1997 to October 1999 and May 2000 to July 2002, were studied. T. scyllium changed their main food items from shrimps to echiuran worms then to cephalopods with their growth. Comparing food habits by the value of similarity (maximum = 1), the small-sized T. scyllium had a low value (0.17) compared to larger sharks. T. scyllium gradually increased the diversity of food until it reached 700 mm long in total length, however, after that it decreased. H. japanica appeared mainly in summer and autumn and ate cephalopods and fishes. M. griseus preyed on various crustaceans and decreased the diversity of food with growth. M. manazo preferred crustaceans and polychaetes. There was no certain tendency in the diversity of the food habit for M. manazo .     

Growth of the fourspine sculpin <Emphasis Type="Italic">Cottus kazika</Emphasis> in the Gonokawa River,Japan, and effects of water temperature on growth

ABSTRACT:   The fourspine sculpin Cottus kazika is indigenous to Japan and found in Honshu except for the waters facing the Seto Inland Sea, and was also found in southern Shikoku and eastern Kyushu. This species has a catadromous lifestyle and migrates as juveniles from the sea to the middle reaches of rivers to grow. The growth pattern of this fish was investigated by a mark-and-recapture method from July 1994 to December 1996, in the Nigorikawa River, a tributary of the Gonokawa River system, Shimane Prefecture. 0-year-old fish of 50–70 mm total length ( TL ) occurred in the study area from June to July, grew to 90–140 mm  TL by the following April, and attained 160–210 mm  TL by December. This fish grew rapidly in September–November and April–July, almost ceasing to grow in July–September. It seems that this stagnant growth phase in summer is a characteristic of the seasonal growth pattern of C. kazika . A rearing experiment indicated that the growth rate of C. kazika was higher at 16–22°C than at 12–14 and 24–26°C. This result supports the field evidence of a stagnant growth phase in summer in the Nigorikawa River.     

Comparison of spatiotemporal patterns in reproduction of the kuruma prawn Marsupenaeus japonicus between two regions having different geographic conditions in Kyushu, southern Japan

ABSTRACT:   The Yatsushiro Sea and Shibushi Bay are, respectively, located on the western and south-eastern coast of Kyushu, southern Japan. The Yatsushiro Sea is a shallow semi-enclosed inland sea, whereas Shibushi Bay is an open-type bay with a deep and wide mouth facing the open sea. The size at sexual maturity and spatiotemporal patterns of reproduction of the kuruma prawn Marsupenaeus japonicus (Decapoda, Penaeidae) were examined and compared between these two regions. In the Yatsushiro Sea, the size at sexual maturity was estimated to be 131 mm body length. However, the estimated size at sexual maturity was considerably larger (154 mm) in Shibushi Bay. The spawning season of M. japonicus was estimated to continue from April to September in the Yatsushiro Sea, whereas it was estimated to be longer in Shibushi Bay, from March to November. It is believed that the warm water temperature due to the strong effect of the Kuroshio Current prolonged the spawning season of M. japonicus in Shibushi Bay. The spawning grounds were estimated to be in areas deeper than 10 m in the Yatsushiro Sea and deeper than 20 m in Shibushi Bay. In Shibushi Bay, body size distribution of mature females was considered to be less affected by water depth in comparison with the Yatsushiro Sea, although older mature females larger than 200 mm body length also spawned outside of the bay.