阿特拉津降解菌ADH-2的分离、鉴定及其特性研究

从长期施用阿特拉津的玉米地中采集土样,通过富集培养的方法分离出一株能以阿特拉津为唯一碳、氮源生长的细菌ADH-2,结合生理生化特陛及16SrRNA基因的相似性分析将其初步鉴定为节杆菌属（Arthrobacter sp．）。该菌在10h内对100mg·L-1阿特拉津的降解率为99．9％。外加氮源能促进菌株的生长,但对阿特拉津的降解有轻微的抑制作用。外加蔗糖和葡萄糖能显著促进菌株的生长,但对阿特拉津的降解表现出显著的抑制。而淀粉既能促进菌株的生长又能促进阿特拉津的降解。对其降解基因的初步研究显示,该菌含有trzN、atzB和atzC3个阿特拉津降解相关基因。通过与本实验室另外两株阿特拉津降解菌比较,菌株ADH-2具有更好的应用潜力。     

节杆菌AD26的分离鉴定及其与假单胞菌ADP对阿特拉津的联合降解

用富集培养法,从农药厂的工业废水中分离到高效降解除草剂阿特拉津的AD26菌株,通过16SrRNA基因序列分析,该菌株被鉴定为节杆菌（Arthrobacter sp.）。降解基因的PCR分析表明,AD26含有阿特拉津降解基因trzN和atzBC,它能以阿特拉津为唯一氮源、蔗糖或柠檬酸钠为碳源生长,将阿特拉津降解成氰尿酸,降解速度快但降解不完全。假单胞菌（Pseudomonas sp.）ADP是Wackett实验室分离的阿特拉津降解菌株,含有阿特拉津降解基因atzABCDEF,能以阿特拉津为唯一氮源、柠檬酸钠为碳源（不能以蔗糖为碳源）生长,将阿特拉津降解成NH3和CO2,降解完全但降解速度慢。在阿特拉津浓度为200mg·L^-1的无机盐培养基中进行的AD26和ADP混合培养表明,它们对阿特拉津的降解发生了互补和增强作用,两个菌株能在以阿特拉津为唯一氮源、蔗糖为碳源的培养基中生长,而且生长和降解速率都好于单个菌株,培养72h后阿特拉津去除率达到99.9%,其中76.7%的阿特拉津被降解成NH3和CO2。这表明由节杆菌AD26和假单胞菌ADP组成的混合菌株在阿特拉津废水处理和污染土壤的生物修复中有很好的应用潜力。     

阿特拉津降解菌FM326（Arthrobacter sp.）的分离筛选、鉴定和生物学特性

采集除草剂阿特拉津污染的土壤,通过直接涂布法和富集驯化培养分离法,分别获得6株和5株能够降解阿特拉津的细菌。通过降解效率和降解动态试验,筛选到1株高效降解阿特拉津的菌株FM326,该菌株能以阿特拉津为唯一的碳源和氮源生长,培养96h后对1000mg·L-1阿特拉津降解效率达到97%。通过生理生化鉴定和16SrDNA序列分析,菌株FM326鉴定为节杆菌属（Arthrobacter sp.）细菌。该菌株表现出最适生长温度30～35℃,最适生长pH值5～9,好氧生长的生长特性。     

Arthrobacter sp. AG1菌株降解土壤中阿特拉津研究

在阿特拉津浓度为50mg/kg干土的黄棕壤、潮土和红壤接种1.5×106CFU/g干土的降解菌Arthrobacter sp. AG1,10天后土壤中的阿特拉津分别降解至1.5、6.6和10mg/kg干土。阿特拉津的降解速率受到土壤性质的影响,但AG1仍能在不满足其生长繁殖要求的pH值的土壤中有效降解酸性土壤中阿特拉津;土壤中水分含量对降解效果影响较大,>20%时降解效果较好;土壤低含水量和低pH值会导致AG1降解阿特拉津的活力下降。不同的接种量对降解效果有一定影响,但105～107CFU/g干土接种量的AG1都能有效发挥降解作用。AG1降解完土壤中的阿特拉津后,在土壤含水量分别为5%和15%的情况下能长期保持降解活性,对60天后第2次施入黄棕壤和潮土中的50mg/kg阿特拉津4天时降解效率在65%以上。     

阿特拉津降解细菌的筛选和鉴定

从营口农药厂排污口、药厂周围受污染土壤及未受污染农田分别采集活性污泥和土样,共富集分离到以阿特拉津作为唯一氮源生长的28个菌株。对所分离到的菌株进行降解能力的测定,筛选到降解能力相对较高的2个菌株,其降解率分别为62.7%、58.3%,分别编号为AT1、AT3;对AT1、AT3菌株进行初步鉴定,分别为芽孢杆菌(Bacillus sp.)、假单胞菌(Pseudom onas sp.)。     

粘土矿物固定化微生物对土壤中阿特拉津的降解研究

以粘土矿物为载体,采用吸附挂膜法对已筛选的阿特拉津降解菌株进行固定化,并应用固定化微生物降解土壤中的阿特拉津。结果表明,该菌株在粘土矿物上生长良好,根据菌种生理生化特性、环境扫描电镜图片以及16S rDNA基因的相似性分析初步鉴定该菌株为Ochrobactrum sp.。接种降解菌能明显加快阿特拉津在土壤中的降解速率,粘土矿物固定化微生物的降解效果要明显优于游离菌,粘土矿物粒径越小,固定化微生物的降解效果越好,纳米粘土矿物固定化微生物的降解效果要好于原粘土矿物。用一级动力学方程描述阿特拉津在土壤中的降解过程,不同土壤中阿特拉津的降解速率不同。阿特拉津在红壤、砂姜黑土、黄褐土中的降解半衰期（t1/2）分别为36.9、49.1、55.0 d,投加纳米蒙脱石固定化降解菌后的半衰期则分别为16.3、25.3、21.7 d。     

阿特拉津降解菌LY-2的分离鉴定及其对污染土壤的修复

除草剂阿特拉津(2-氯-4-乙胺基-6-异丙胺基-1,3,5-三嗪,2-chloro-4-ethylamino-6-isopropylamino-1,3,5-triazine,Atrazine)在很多国家普遍使用,对自然环境和人类健康造成威胁。本研究利用富集法,从黑龙江省哈尔滨市巴彦县施用多年阿特拉津的玉米地表层土中,分离出高效降解阿特拉津的菌株LY-2。LY-2以阿特拉津为唯一氮源,初步鉴定属于肠杆菌属(Enterobacter sp.)。PCR检测结果表明,LY-2含有阿特拉津降解相关的基因—阿特拉津氯水解酶基因(atrazine chlorohydrolase gene,atzA)、羟基阿特拉津脱乙胺基水解酶基因(hydroxyatrazine N-ethylaminohydrolase gene,atzB)和N-异丙基氰尿酰氨异丙氨基水解酶基因(N-isopropylammelide isopropylaminohydrolase gene,atzC)。LY-2在48 h内对100 mg/L阿特拉津降解率为98.7%;适宜温度为25~35℃,适宜酸碱度为p H 6~9;外加氮源没有降低该菌株对阿特拉津的降解率。土壤修复实验结果显示,培养7 d后,LY-2菌株对阿特拉津污染土壤(100 mg/kg)的降解率高达86.7%,培养14 d后,降解率高达90.1%。LY-2菌株在相对较短的时间内表现出良好的修复效果,在修复阿特拉津污染的土壤方面具有潜在的应用价值。     

竹炭固定化微生物对土壤中阿特拉津的降解研究

采用环境友好材料竹炭为主要载体,壳聚糖和海藻酸钠为辅助载体,固定从污泥中分离出的阿特拉津降解菌株,研究不同固定材料对降解菌生长的影响,以及固定化微生物对土壤中阿特拉津的降解效果.结果表明,竹炭对阿特拉津降解菌具有较强的吸附固定能力,且竹炭粒径越小,固定化效果越好.利用壳聚糖和海藻酸钠交联并加固阿特拉津降解菌,增大了固定化空间,显著增加了降解菌的生物量,并提高了阿特拉津的降解效率.1％壳聚糖+5％海藻酸钠+竹炭+降解菌颗粒对阿特拉津降解菌的固定化效果最佳,施用该微生物固定化颗粒28天后,砂姜黑土及红壤中阿特拉津残留率分别为48.07％和47.23％.     

丛枝菌根(AM)真菌对土壤中阿特拉津降解的影响

于盆栽高粱(Sorghum,龙杂一号)条件下研究了丛枝菌根(AM)真菌根内球囊霉(Glomus intraradices,GI)和摩西球囊霉(Glomus mosseae,GM)降解土壤中阿特拉津的效用。结果表明,阿特拉津(浓度为50 mg/kg)污染土壤中,供试AM真菌都能够侵染高粱根系形成菌根,而且GM比GI侵染效果好,最高侵染率可达到90.5%,显著提高了植株的生物量。接种AM真菌后土壤中阿特拉津的残留浓度显著低于不接种对照处理,并且接种GM比GI对阿特拉津的降解效果显著。接种GM处理的土壤中阿特拉津最高降解率达到了91.6%,其中菌根效应占22.6%。接种AM真菌的宿主植物根际土壤中微生物数量多于不接种处理,且GM优于GI处理,说明AM真菌能促进根际微生物的繁殖。此外,接种AM真菌后能显著增加土壤中脲酶活性,但对过氧化氢酶活性影响不显著。认为GM是一株比较理想的修复阿特拉津污染土壤的AM真菌。     

木糖氧化无色杆菌反硝化亚种细菌的分离鉴定及其菲降解特性研究

利用选择性富集培养及升华法,从石油污染的土壤中分离到2株菲降解细菌,它们在以菲为唯一碳源的培养基上生长良好。应用BIOLOG细菌鉴定系统和分子生物学方法对两株细菌进行鉴定,两株菌分别为坚强芽孢杆菌(Bacillus.firmus)和木糖氧化无色杆菌反硝化亚种(Achromobacter.xylosoxidanssub.sp.denitrificans),两株菌均具有邻苯二酚氧化酶活性。两株细菌在液体培养条件下都表现较强降解菲的能力,液体培养60.h约90%的加入菲被降解。通过测定液体培养基中菲浓度和菌体密度变化发现,菌株降解菲的量与其生长密度相关;随着菌体浓度(吸光度)的增加,代谢底物菲的浓度明显降低,两株菌混合使用能够大幅度提高降解菲的能力。     

Characteristics of bacteria in the forest soils under natural vegetation

Characteristics of the predominant bacteria isolated in November and May from the forest soils of both dry and wet types under natural vegetation were studied.

Although Gram-negative rods were the most abundant bacteria in both soil types and in both seasons, their contents were less and other bacteria especially spore-forming ones increased in May.

Among Gram-negative rods in the soil of the dry type in November, the most predominant was those with nonchromogenic rods motile with polar flagella which grew in a simple synthetic media containing glucose or p-hydroxybenzoate and ammonium as the sole carbon and nitrogen sources. In May, the ratio of the bacteria which require amino nitrogen or those with more chomplex nutritional requirement increased. In the soil of moderately wet type, the difference in kinds of bacteria between the two seasons was not so clear as that in the dry type.

Most of Bacillus species obtained in these soils were those requiring amino acids or other growth factors among which B. cereus was most abundant.     

A comparison of three atrazine-degrading bacteria for soil bioremediation

The ability of three atrazine-degrading bacteria, Pseudomonas sp. strain ADP, a Pseudaminobacter sp., and a Nocardioides sp., to degrade and mineralize this herbicide in a loam soil was evaluated in laboratory microcosms. These bacteria all hydrolytically dechlorinate atrazine, and degrade atrazine in pure culture with comparable specific activities. The Pseudaminobacter and Nocardioides can utilize atrazine as sole carbon and nitrogen source, whereas the Pseudomonas can utilize the compound only as a nitrogen source. The Pseudomonas and Pseudaminobacter mineralize the compound; the end product of atrazine metabolism by the Nocardioides is N-ethylammelide. At inoculum densities of 10⁵ cells/g soil, only the Pseudaminobacter and Nocardioides accelerated atrazine dissipation. The Pseudaminobacter mineralized atrazine rapidly and without a lag, whereas atrazine was mineralized in the Nocardioides-inoculated soil but only after a lag of several days. The Pseudaminobacter remained viable longer than did the Pseudomonas in soil. PCR analysis of recovered bacteria indicated that the genes atzA (atrazine chlorohydrolase) and atzB (hydroxyatrazine ethylaminohydrolase) were less stable in the Pseudaminobacter than the Pseudomonas. In summary, this study has revealed important differences in the ability of atrazine-hydrolyzing bacteria to degrade this compound in soil, and suggests that the ability to utilize atrazine as a carbon source is important to establish "enhanced degradation" by ecologically meaningful inoculum densities.     

Isolation of pentachlorophenol decomposing bacteria from soil

The bacteria capable of degrading pentachlorophenol (PCP) were isolated from soil. In the soil perfused with 40 ppm PCP solution, PCP was decomposed and five chlorine atoms of PCP were liberated as chloride ion after about 3 weeks. Re-addition of PCP after its degradation, accelerated the rate of PCP degradation and de-chlorination. After the addition of PCP to the soil three times, bacteria which grew on PCP agar were counted to be about 2 × 10⁷ per gram dry soil. In the liquid medium inoculated with the perfused soil, PCP degradation and complete de-chlorination were found. In this case, multiplication of bacteria capable of growing on PCP agar was found. The bacteria capable of growing on and degrading PCP in the medium with inorganic salts and 40 ppm PCP as a sole source of carbon were isolated from the agar plates for enumeration of the bacteria. From the morphological and physiological properties of the isolated bacteria, the genus of the bacteria was considered to be Pseudomonas or a closely related one. In the culture medium with PCP and inorganic salts, the bacteria degraded PCP and completely de-chlorinated it. The de-chlorination process corresponded approximately to PCP disappearance. Pathways of PCP metabolism are not yet elucidated.     

Diversity of rhizobia isolated from an agricultural soil in Argentina based on carbon utilization and effects of herbicides on growth

Seventy-six rhizobial isolates belonging to four different genera were obtained from the root nodules of several legumes (Vicia sativa, Vicia faba, Medicago sativa, Melilotus sp., Glycine max and Lotus corniculatus). The action of five commonly used herbicides [2,4-dichlorophenoxyacetic acid (2,4-D), glyphosate (GF), dicamba, atrazine and metsulfuron-methyl] on the growth of rhizobial strains was assessed. Subsequently, GF and 2,4-D were tested in a minimum broth as C and energy sources for 20 tolerant strains. The ability of these strains to metabolize different carbon sources was studied in order to detect further differences among them. Tolerance of the bacteria to agrochemicals varied; 2,4-D and GF in solid medium inhibited and diminished growth, respectively, in slow-growing rhizobial strains. Among slow-growing strains we detected Bradyrhizobium sp. SJ140 that grew well in broth + GF as the sole C and energy source. No strain was found which could use 2,4-D as sole C source. The 20 strains studied exhibited different patterns of C sources utilization. Cluster analysis revealed three groups, corresponding to four genera of rhizobia: Rhizobium (group I), Sinorhizobium (group II) and Mesorhizobium–Bradyrhizobium (group III). On the basis of the results obtained on responses to herbicides and C sources utilization by the isolates investigated, it was possible to differentiate them at the level of strains. These results evidenced a considerable diversity in rhizobial populations that had not been previously described for Argentinean soils, and suggested a physiological potential to use natural and xenobiotic C sources.     

灭多威降解菌mdw-1的分离和降解特性研究

Methomyl, an extremely toxic pesticide, is widely used in agriculture. A strain named mdw-1 capable of degrading methomyl rapidly was successfully isolated from activated sludge in this study. It could utilize methomyl as the sole carbon or nitrogen source. The optimal temperature and medium pH for its growth and methomyl biodegradation were 30-C and 7.0, respectively. It was identified as a Paracoccus sp. according to its morphological features, physiological and biochemical characteristics, and phylogenetic analysis based on the sequence of 16S rDNA. Gas chromatography-mass spectrometry (GC-MS) analysis showed that methomyl could be completely transformed to S-methyl-N-hydroxythioacetamidate in 10 h of incubation with the isolate mdw-1.