Abundance and diversity of sulphur-oxidising bacteria and their role in oxidising elemental sulphur in cropping soils

There is an increasing interest in elemental S as a S fertiliser source, but to be available to plants, elemental S has to be oxidised to sulphate. Elemental S oxidation is known to be affected by soil properties and environmental conditions, but it is still unclear if elemental S oxidation is related to the abundance and diversity of S-oxidising bacteria in cropping soils. In this study, we investigated the abundance and diversity of S-oxidising bacteria by targeting a functional gene (soxB) and assessed their relationship with elemental S oxidation in ten cropping soils. Positive correlations between soil C, N and S contents on the one hand and the abundances of soxB and 16S ribosomal deoxyribonucleic acid (rRNA) genes on the other suggested that the abundances of S oxidising bacteria in particular and of bacteria in general depend on soil C and nutrient supply. Both soxB and 16S rRNA gene abundances were significantly correlated with the oxidation rate of elemental S (P < 0.05). In addition, more than 80% of the variation in the oxidation rate of elemental S could be explained by the combination of soxB or 16S rRNA gene abundances and soil pH, suggesting that pH not only affected bacterial abundances but also their activity during elemental S oxidation. Clone libraries constructed with the soxB primers showed genera belonging to Alphaproteobacteria, Betaproteobacteria and Deltaproteobacteria and Actinobacteria. The phylogenetic diversity and relative distribution of soxB clones revealed great differences across soils. However, no direct linkage was found between the diversity of S-oxidising bacteria and elemental S oxidation rate.     

Urban soil resources of medium-sized cities in Poland: a comparative case study of Toruń and Zielona Góra

Purpose

Despite the many studies of urban soils, a comparative analysis for cities of a similar size has not yet been conducted. Thus, the aim of this review paper was to compare the soil distribution patterns in the area of two medium-sized Polish cities (Toruń and Zielona Góra). The authors attempted to answer the question of how natural and technogenic factors contributed to the transformation of urban soils and what the similarities and differences are between these two studied cities.

Materials and methods

First, both the natural and the human-related (including historical) factors influencing the soil formation in the studied cities were analysed. Then, a comparison of the degree of transformation of the urban soil environment was presented. The data obtained by the authors during nearly two decades of research (over 200 soil profiles) were used.

Results and discussion

Intensive development of the built-up areas in Toruń brought heavy and long-term transformations of soils, which demonstrate the typical properties of Urbic Technosols, Ekranic Technosols and other technogenic soils. Zielona Góra showed a similar state of soil transformation over a considerably smaller area. Currently, the differences in the soil properties in many built up areas have been blurred, despite the habitat and historical base. The similarities of the soil properties concerned, in particular, a high content of skeletal remains (from a few to over 30%), elevated pH (in KCl) values (even above 8.0) and the artificial soil horizons formation. Both cities struggle with similar problems regarding the changes in the land use within the areas covered by these soils.

Conclusions

It was found that, despite the significant habitat and historical differences between the two studied cities, most of the urban soils, especially Urbic Technosols, Ekranic Technosols and Regosols (Relocatic and Technic), are characterised by similar morphology and properties. The most important differences are the time and scale of the area transformation, which influence the extent of Technosols and Anthrosols within the city borders. The most distinct differences concern the natural and slightly transformed soils, which are the results of various soil-forming factors.

     

A comparative analysis of microbiomes in natural and anthropogenically disturbed soils of northwestern Kazakhstan

The goal of this study was to determine the relationships between the structure of the soil microbiome and the agroecological state of soils by the example of natural undisturbed (steppe areas) and anthropogenically disturbed (pastures, croplands, fallows) areas in the territory of northwestern Kazakhstan. The highest abundance of proteobacteria was found in the anthropogenically disturbed of fallows and in undisturbed soils; in other cases, actinobacteria and representatives of the Firmicutes phylum predominated. Different kinds of anthropogenic impacts resulted in the decrease in the portions of bacteria from the Acidobacteria, Gemmatimonadetes, and Firmicutes phyla. In the disturbed soils, the portions of bacteria from the Erysipelothrix, Mycobacterium, Methylibium, Skermanella, Ralstonia, Lactococcus, Bdellovibrio, Candidatus nitrososphaera, Catellatospora, Cellulomonas, Stenotrophomonas, and Steroidobacter genera increased. Bacteria of the Erysipelothrix and Methylibium genera occurred only in the undisturbed soils. The anthropogenically disturbed and undisturbed soils differed significantly in the taxonomic structure of their microbiomes forming two separate clusters, which confirms the efficiency of using the data on the structure of soil microbiomes when assessing the agroecological status of soils.     

Long-term agronomic practices alter the composition of asymbiotic diazotrophic bacterial community and their nitrogen fixation genes in an acidic red soil

The asymbiotic diazotrophic bacteria are important for nitrogen (N) input to soil. Here, we investigated asymbiotic diazotrophic bacteria in an acidic red soil from functional, phylogenetic, and ecological perspectives. We firstly confirmed that phosphorus (P) availability determines the overall asymbiotic N fixation potential in the red soil. Then, we analyzed the soil bacterial community and N fixing (nifH) gene composition. Long-term different fertilizations significantly affected the composition of soil bacterial community. In addition, long-term organic cultivations increased most of the asymbiotic diazotrophic bacteria and the corresponding nifH gene abundances. Few asymbiotic diazotrophic bacteria, belonging to Chloroflexaceae, Methylocystaceae, Enterobacteriaceae, and Pseudomonadaceae, and their corresponding nifH genes were more abundant in N and P co-limited than in not co-limited soils, suggesting that some bacterial taxa from these families might be activated under nutrient limited conditions. Our findings provided new information for the distribution of asymbiotic diazotrophic bacteria in red soil and gave insights into the ecology of diazotrophic bacteria.     

Bioremediation of Hexachlorocyclohexane-Contaminated Soil by the New <Emphasis Type="Italic">Rhodococcus wratislaviensis</Emphasis> Strain Ch628

Currently, there are large areas of soils contaminated with hexachlorocyclohexane (HCH) isomers which are included in the group of persistent organic pollutants. For the bioremediation of such soils, a new HCH-degrading Rhodococcus wratislaviensis strain Ch628 was isolated from long-term organochlorine contaminated soils. The strain Ch628 was able to degrade 32.3% γ-hexachlorocyclohexane (γ-HCH/lindane), 25.2% hexachlorobenzene, and 100% chlorobenzene in resting cell conditions. The strain Ch628 was bioaugmented in chronically HCH-contaminated soil. The results showed that the bioaugmentation of contaminated soil with the strain Ch628 led to HCH degradation. In the bioaugmented system, the efficiency of HCH removal at the initial concentration of about 238.7 ± 4.9 mg kg^?1 soil was 44.8%, while the system with indigenous microflora (without R. wratislaviensis strain Ch628) and the system with abiotic control removed 33.3 and 16.4% of this compound during the same period, respectively. Strain Ch628 could effectively degrade α-, β-, and γ-isomers of HCH (77.1, 100, and 100%, respectively) and heptachlorocyclohexane (69.9%) in the model soil systems. Moreover, the bioaugmentation with the strain Ch628 led to degradation of tri-, tetra-, and penta-chlorobenzenes, which are of HCH degradation metabolites. For the first time, it was found that the bioaugmentation with the bacterial strain Rhodococcus wratislaviensis Сh628 led to a significant reduction of the toxicity of the HCH-contaminated soil for the test organisms, such as Chlorella vulgaris Beijer and Daphnia magna Straus.     

Survival of <Emphasis Type="Italic">Escherichia coli</Emphasis> O157:H7 in various soil particles: importance of the attached bacterial phenotype

The risk of enteropathogens to food and water is highly dependent on their survival in soil environments. Here, the effects of soil type, particle size, the presence of natural organic matter (NOM) or Fe/Al (hydro)oxides on pathogenic Escherichia coli O157:H7 survival in sterilized soil particles were assessed through survival, attachment, metabolic activity, and qRT-PCR analyses. The abundance of inoculated E. coli O157:H7 in Brown soil (Alfisol) particles increased 0.6–1.4 log₁₀ CFU/g within 3 days (except for NOM-stripped clay), while that in Red soil (Ultisol) particles decreased rapidly in 8 days post-inoculation. Additionally, survival of bacteria was significantly enhanced when Fe/Al (hydro)oxides had been removed from Red soil particles. For the two soils, E. coli O157:H7 survived the longest in NOM-present clays and the bacterial adenosine 5′-triphosphate (ATP) levels were 0.7–2.0 times greater in clays than in sands and silts on day 8. Moreover, clays were more effective than silts and sands in binding cells and changing the expressions of acetate pathway-associated genes (pta and ackA). For silts and sands, E. coli O157:H7 decayed more rapidly in the presence of NOM and similar trends of bacterial ATP levels were observed between NOM-stripped and NOM-present soil particles, indicating that the primary role of NOM was not as a nutrient supply. These findings indicate that soil particles function mainly through attachment to change the metabolic pathway of E. coli O157:H7 and ultimately impact the survival of bacterial pathogens in soils.     

Transformation and form of dichlorodiphenyltrichloroethane (DDT) applied to Moscow soils

The transformation rate and direction of dichlorodiphenyltrichloroethane (DDT) and its forms entering the surface layers of Moscow soils have been analyzed. The DDT transformation rate into metabolites—dichlorodiphenyldichloroethylene (DDE) and dichlor diphenyl dichloroethane (DDD)—is small. In 75% of soils, less than half the initial pesticide is transformed. In 67.5% of soils, formation of DDD predominates in the DDE formation. In soils of the entire area of Moscow, 16% of DDT was transformed into DDE and 23% into DDD. The о,n′-DDT to n,n′-DDT ratio is <0.3 for 95% of soils, and the mean ratio is 0.1, which is typical for application of DDT as a technical product.     

Taxonomic and functional characterization of microbial communities in Technosols constructed for remediation of a contaminated industrial wasteland

Purpose

The construction of Technosols is an emergent technology based on the assemblage of technogenic materials for ecological reclamation of polluted land and waste recycling. Although this technology is in expansion, knowledge about the microbial communities in Technosols is limited, despite their central role in ecosystem functioning. In this 2-year study, the diversity and the abundance of total and functional microbial communities were characterized in two types of Technosols constructed to reclaim contaminated sites.

Materials and methods

The structure of the microbial community was analyzed by automated ribosomal intergenic spacer analysis fingerprinting in both types of Technosols, and the taxonomic diversity was further assessed by 16S rRNA clone library sequencing. Real-time PCR was used to quantify the abundance of the total bacterial and crenarchaeal community and of the functional guilds involved in N-cycling.

Results and discussion

16S rRNA sequencing showed that Proteobacteria was the main phylum in the Technosols (50?C80?%). The other significant phyla identified were Bacteroidetes, Firmicutes, Choloroflexi, and Actinobacteria. Real-time PCR quantification of the abundance of ammonia oxidizers, nitrate reducing, and denitrifying microbial communities involved in nitrogen cycling revealed that bacterial ammonia oxidizers were more abundant than crenarchaeal ammonia oxidizers. A high spatial variability of the microbial community, which decreased with time, was also observed.

Conclusions

At the phyla and class levels, the composition of the microbial community in constructed Technosols was similar to ??natural?? soils. Both the total bacteria and microbial guilds involved in N-cycling were abundant, but in contrast to most natural soils, bacteria and not crenarchaea were the numerically dominant ammonia oxidizers in both types of Technosols. The decrease with time of the variability in microbial community structure support early pedogenic evolution of recently constructed Technosols.     

Assessment of <Emphasis Type="Italic">Koelreuteria paniculata</Emphasis> Seedling for Phytroremediation of Pyrene-Contaminated Soils

Phytoremediation is a cost-effective and environmentally friendly technology using plants for the cleanup of both inorganic and organic contaminated sites. In this study, a pot culture experiment has been conducted for 180 days in a greenhouse to examine the capability of Koelreuteria paniculata on pyrene (Pyr) dissipation in contaminated soil. Three treatments were employed and they were: (1) polluted soil with K. paniculata fine roots addition (T1), (2) polluted soil with planted seedlings (T2), and (3) polluted soil (C). Results showed Pyr concentration in soils was reduced by 21.4, 36.2, and 86.4% by natural losses, fine roots addition, and planted K. paniculata treatments, respectively, meaning plants substantially enhanced the dissipation of Pyr from soil. Cultivated K. paniculata seedlings significantly increased soil total nitrogen (TN), total organic carbon, dissolved organic carbon (DOC), and microbial biomass carbon, but not total phosphorus, when compared to the control. The removal efficiency of Pyr was lower in the adding of fine roots treatment than in the planted K. paniculata treatment. The principal component analysis indicated the promotional dissipation of Pyr in soil by planted K. paniculata was likely attributed to increased microbial quantity and activity, DOC, and TN content in the rhizosphere. Our results suggest that K. paniculata is a suitable plant species used in phytoremediation for Pyr-contaminated soils and the efficiency on the dissipation of Pyr is considerably enhanced using living plants than adding dead organic matters. The study provided a reference for the application of K. paniculata in the remediation of Pyr-contaminated soil.     

Influence of Physicochemical Factors on Bacterial Communities Along the Lower Mekong River Assessed by Illumina Next-Generation Sequencing

The relationship between land use and microbial community structure at seven sites along the Lower Mekong River, between Thailand and the Loa People’s Democratic Republic, was investigated using Illumina next-generation sequencing of the V5–V6 hypervariable regions of the 16S rRNA gene. In total, 14,470 operational taxonomic units (OTUs) were observed. Community composition was significantly different between sampling years. Moraxellaceae and Comamonadaceae were the predominant bacterial families in upstream sites, which included agricultural and urban areas in the Loei and Nong Khai provinces of Thailand. Members of the family Comamonadaceae were prevalent in agricultural and urban sites in Bueng Kan Province, while Moraxellaceae and Burkholderiaceae were the major families in a site downstream of an urban area in the Nakhon Phanom Province of Thailand. The bacterial community observed from a forested area of Patam National Park in Thailand showed greatest diversity, and several major bacterial families including Comamonadaceae, Moraxellaceae, and Pseudomonadaceae were more dominant than other sites. The diversity of fecal indicator bacteria, determined by ERIC-PCR DNA fingerprinting, indicated the presence of 29 strains of Escherichia coli and 21 strains of Enterococcus, while TP-RAPD patterns represented six species of Enterococcus. Results of this study indicated that although the difference in the distribution of bacterial phyla and families was found among sampling sites, the bacterial community composition, based on the presence of OTUs, continuously retained its signature across approximately 758 km along the Lower Mekong River, regardless of the type of land use. Water parameters, including temperature, turbidity, DO, and air temperature, also differentially affected the abundance of bacterial families along the Mekong River.     

The effect of acidity on the distribution and symbiotic efficiency of rhizobia in Lithuanian soils

The distribution and symbiotic efficiency of nodule bacteria Rhizobium leguminosarum_bv. trifolii F., Sinorhizobium meliloti D., Rhizobium galegae L., and Rhizobium leguminosarum bv. viciae F. in Lithuanian soils as dependent on the soil acidity were studied in the long-term field, pot, and laboratory experiments. The critical and optimal pH values controlling the distribution of rhizobia and the symbiotic nitrogen fixation were determined for every bacterial species. The relationship was found between the soil pH and the nitrogen-fixing capacity of rhizobia. A positive effect of liming of acid soils in combination with inoculation of legumes on the efficiency of symbiotic nitrogen fixation was demonstrated.     

Geographic distance and amorphous iron affect the abundance and distribution of <Emphasis Type="Italic">Geobacteraceae</Emphasis> in paddy soils in China

Purpose

Geobacteraceae are important dissimilatory Fe (III)-reducing microorganisms, influencing the cycling of metals, nutrients as well as the degradation of organic contaminants. However, little is known about their distribution, diversity, and abundance of Geobacteraceae and the effects of environment factors and geographic distance on the distribution and diversity of Geobacteraceae in paddy soils remain unclear. Therefore, the objectives of this study were to investigate the distribution, diversity, and abundance of Geobacteraceae in paddy soils and to determine key factors in shaping the Geobacteraceae distribution, environmental factors, geographic distance, or both and to quantify their contribution to Geobacteraceae variation.

Materials and methods

Illumina sequencing and quantitative real-time PCR using a primer set targeting 16S rRNA genes of bacteria affiliated with the family Geobacteraceae were employed to measure the community composition, diversity, and abundance patterns of 16S rRNA genes of Geobacteraceae in 16 samples collected from north to south of China. MRT, Mantel test, and VPA were used to analyze the relationship between communities of Geobacteraceae and environmental factors and geographic distance.

Results and discussion

Quantitative PCR showed that the abundance of 16S rRNA genes of Geobacteraceae ranged from (1.20?±?0.18)?×?10⁸ to 1.13?×?10⁹?±?2.25?×?10⁸ copies per gram of soil (dry weight) across different types of soils. Illumina sequencing results showed Geobacter was the dominant genus within the family of Geobacteraceae. Multivariate regression tree (MRT) analysis showed that soil amorphous iron contributed more (22.46 %) to the variation of dominant species of Geobacteraceae than other examined soil chemical factors such as pH (14.52 %), ammonium (5.12 %), and dissolved organic carbon (4.74 %). Additionally, more geographically distant sites harbored less similar communities. Variance partitioning analysis (VPA) showed that geographic distance contributed more to the variation of Geobacteraceae than any other factor, although the environmental factors explained more variation when combined. So, we detected the uneven distribution of Geobacteraceae in paddy soils of China and demonstrated that Geobacteraceae community composition was strongly associated with geographic distance and soil chemical factors including aFe, pH, Fe, DOC, C:N, and NO₃ ^?-N. These results greatly expand the knowledge of the distribution of Geobacteraceae in environments, particularly in terrestrial ecosystems.

Conclusions

Our results showed that geographic distance and amorphous iron played important roles in shaping Geobacteraceae community composition and revealed that both geographic distance and soil properties governed Geobacteraceae biogeography in paddy soils. Our findings will be critical in facilitating the prediction of element cycling by incorporating information on functional microbial communities into current biogeochemical models.

     

Effect of <Emphasis Type="Italic">Silene vulgaris</Emphasis> and Heavy Metal Pollution on Soil Microbial Diversity in Long-Term Contaminated Soil

In this study, we analysed the impact of heavy metals and plant rhizodeposition on the structure of indigenous microbial communities in rhizosphere and bulk soil that had been exposed to heavy metals for more than 150 years. Samples of the rhizosphere of Silene vulgaris and non-rhizosphere soils 250 and 450 m from the source of emission that had different metal concentrations were collected for analyses. The results showed that soils were collected 250 m from the smelter had a higher number of Cd-resistant CFU compared with the samples that were collected from 450 m, but no significant differences were observed in the number of total and oligotrophic CFU or the equivalent cell numbers between rhizosphere and non-rhizosphere soils that were taken 250 and 450 m from the emitter. Unweighted pair group method with arithmetic mean (UPGMA) cluster analysis of the denaturing gradient gel electrophoresis (DGGE) profiles, as well as a cluster analysis that was generated on the phospholipid fatty acid (PLFA) profiles, showed that the bacterial community structure of rhizosphere soils depended more on the plant than on the distance and metal concentrations. The sequencing of the 16S rDNA fragments that were excised from the DGGE gel revealed representatives of the phyla Bacteroidetes, Acidobacteria, Gemmatimonadetes, Actinobacteria and Betaproteobacteria in the analysed soil with a predominance of the first three groups. The obtained results demonstrated that the presence of S. vulgaris did not affect the number of CFUs, except for those of Cd-resistant bacteria. However, the presence of S. vulgaris altered the soil bacterial community structure, regardless of the sampling site, which supported the thesis that plants have a higher impact on soil microbial community than metal contamination.     

Bacterial diversity in peat bogs of karst depressions

Bacterial diversity in peat bogs of the karst origin was studied with the use of traditional inoculation methods and modern molecular techniques. Representatives of phylogenetic groups of Proteobacteria and Acidibacteria predominated among the domain of Bacteria. Aquaspirillum and Bacillus predominated in the saprotrophic bacterial complex. The amount of actinobacteria in the studied peat samples was higher than that in typical oligotrophic peat bogs.     

Aerobic and microaerophilic actinomycetes of typical agropeat and peat soils

A high number (from tens of thousands to millions of CFU/g of soil) of actinomycetes and a high diversity of genera were found in typical peat and agropeat soils. Agricultural use increases the number and diversity of the actinomycete complexes of the peat soils. In the peat soils, the actinomycete complex is represented by eight genera: Streptomyces, Micromonospora, Streptosporangium, Actinomadura, Microbispora, Saccharopolyspora, Saccharomonospora, and Microtetraspora. A considerable share of sporangial forms in the actinomycete complex of the peat soils not characteristic of the zonal soils was revealed. The number of actinomycetes that develop under aerobic conditions is smaller by 10–100 times than that of aerobic forms in the peat soils. Among the soil actinomycetes of the genera Streptomyces, Micromonospora, Streptosporangium, Actinomadura, Microbispora, and Microtetraspora, the microaerophilic forms were found; among the Saccharopolyspora and Saccharomonospora, no microaerophilic representatives were revealed.     

Effect of <Emphasis Type="SmallCaps">l</Emphasis>-lactic acid from whey wastes on enzyme activities and bacterial diversity of soil

The l-lactic acid obtained from a whey waste valorization process decreased pH and increased phosphate solubilization of a Plagic Antrosol soil. This behavior was reversible due to the complete and rapid degradation of lactic acid by soil microorganisms, leading to a strong soil biological stimulation. Both dehydrogenase (DHA) and acid phosphomonoesterase (APA) activities were also significantly stimulated, due to the stimulation of microbial activity, whereas the β-glucosidase activity was unaffected. There was also a shift in bacterial biodiversity with growth of bacterial strains using lactic acid as a C source. The bacteria enriched belonged to the plant growth-promoting bacteria (PGPb), such as Rhizobium and Azotobacter genus, involved in N₂ fixation, and Pseudomonas and Bacillus genera, involved in phosphorous bioavailability. We conclude that lactic acid application improves fertility parameters on soils. Further research at field scale is needed to confirm these results.     

Physical properties of structural soils containing waste materials to achieve urban greening

Purpose

The densification and expansion of urban areas will increase the streams of waste materials such as bricks, concrete and street sweeping waste. In parallel, green areas offer the potential to overcome many challenges that face growing/expanding cities but require the use of large amounts of natural resources such as natural topsoil and aggregates. In this work, various waste materials mixed with organic debris are tested for greening applications in urban environments as an alternative to the consumption of natural resources.

Materials and methods

Five combinations of artefacts were studied either as “growing material” (i.e. dedicated to plant growth) or “structural material” (as support for traffic). These constructed Technosols were studied in situ in lysimeters under two sets of contrasting climatic conditions at two sites in France (Angers, oceanic climate, and Homécourt semi-continental climate). They were planted with trees (Acer platanoides) and with ryegrass (Lolium perenne L.).

Results and discussion

Compared to natural soils, the constructed Technosols exhibited high porosities and highly saturated hydraulic conductivities (up to 0.76 m³ m^?3, and to 34.74 cm h^?1, respectively). The physical properties–i.e. macroporosity and microporosity–of these artificial soils revealed high water supply for plants, with available soil water ranging from 0.5 to 2.9 mm cm^?1. Tree and ryegrass roots were able to grow in the entire soil volume available in the lysimeters. Organic matter nature and soil pH conditions appeared to be the main drivers of plant development.

Conclusions

Constructed Technosols are suitable for vegetation growth and constitute a valuable alternative to the consumption of natural arable earth for urban greening applications, e.g. gardens, parks, and tree lines. Furthermore, they can provide high levels of relevant ecosystem functions in cities such as water retention and infiltration, plant settlement, carbon sequestration and even biodiversity habitats.

     

<Emphasis Type="Italic">p</Emphasis>-Coumaric can alter the composition of cucumber rhizosphere microbial communities and induce negative plant-microbial interactions

Phenolics from root exudates or decaying residues are usually referred as autotoxins of several plant species. However, how phenolics affect soil microbial communities and their functional significances are poorly understood. Rhizosphere bacterial and fungal communities from cucumber (Cucumis sativus L.) seedlings treated with p-coumaric acid, an autotoxin of cucumber, were analyzed by high-throughput sequencing of 16S rRNA gene and internal transcribed spacer amplicons. Then, feedback effects of the rhizosphere biota on cucumber seedlings were evaluated by inoculating non-sterilized and sterilized rhizosphere soils to sterilized background soils. p-Coumaric acid decreased the bacterial diversity of rhizosphere but increased fungal diversity and altered the compositions of both the bacterial and fungal communities. p-Coumaric acid increased the relative abundances of microbial taxa with phenol-degrading capability (such as Chaetomium, Humicola, and Mortierella spp.) and microbial taxa which contained plant pathogens (such as Fusarium spp.). However, p-coumaric acid inhibited the relative abundances of Lysobacter, Haliangium, and Gymnoascus spp., whose species can have pathogen-antagonistic and/or plant-growth-promoting effects. The positive effect of cucumber rhizosphere microbiota on cucumber seedling growth was reduced by p-coumaric acid. Overall, our results showed that, besides its direct phytotoxicity, p-coumaric acid can inhibit cucumber seedling growth through generating negative plant-soil microbial interactions.     

Potentialities of Six Plant Species on Phytoremediation Attempts of Fuel Oil-Contaminated Soils

A field experiment investigating the phytoremediation potential of six plant species—Goosegrass (Eleusine indica), Bermuda grass (Cynodon dactylon), Sessile joyweed (Alternanthera sessilis), Benghal dayflower (Commelina benghalensis), Lovanga (Cleome ciliata), and Chinese violet (Asystasia gangetica)—on soil contaminated with fuel oil (82.5 ml/kg of soil) have been conducted from March to August 2016. The experiments consider three modalities—Tn: unpolluted planted soils, To: unplanted polluted soils, and Tp: polluted planted soil—randomized arranged. Only three (E. indica, C. dactylon, and A. sessilis) of the six species survived while the others died 1 month after the beginning of experimentations. The relative growth indexes showed a strong similarity between the growth parameters of E. indica and C. dactylon, each on polluted and control soils, unlike A. sessilis. Total petroleum hydrocarbons (TPHs) removal efficiency were 82.56, 80.69, and 77% on soil planted with E. indica, C. dactylon, and A. sessilis, respectively; and 57.25% on non-planted soil. According to the bioconcentration and translocation factors, E. indica and A. sessilis are involved on rhizodegradation and phytoextraction of hydrocarbons whereas C. dactylon is only involved into rhizodegradation. Overall, E. indica and C. dactylon out-yielded A. sessilis in the phytoremediation capacity of fuel oil-contaminated soils.     

Assisted Phytoremediation of a Multi-contaminated Industrial Soil Using Biochar and Garden Soil Amendments Associated with <Emphasis Type="Italic">Salix alba</Emphasis> or <Emphasis Type="Italic">Salix viminalis</Emphasis>: Abilities to Stabilize As,Pb, and Cu

With the development of the industrial era, environmental pollution by organic and inorganic pollutants increased and became a worldwide issue. Particularly, former industrial sites often present high concentrations of metal(loid)s. These pollutions have adverse effects not only on the environment but also to human health, as pollutants can enter the food chain. Therefore, contaminated sites need rehabilitation. Phytoremediation is a clean and low-cost solution to remediate such sites. However, vegetation establishment can be difficult on such extreme soils from both a physical and a chemical point of view. Consequently, amendments, like biochar and garden soil, must be applied. Biochar, product of biomass pyrolysis under low-oxygen conditions, showed beneficial effects on soil fertility and plant growth, as well as metal(loid) sorption properties. The aims of this study were to investigate the effects of two organic amendments, biochar and garden soil, alone or combined, on the physico-chemical properties of a post-industrial soil and the growth of two Salix species (Salix alba and Salix viminalis) and evaluate the phytostabilizing capacities of the two Salix species. In this goal, a greenhouse experiment was performed, using garden soil at 50% (v/v) and/or biochar at 2 or 5% (w/w). The results showed that biochar did not improve soil physico-chemical properties, neither did it affect plant parameters (dry weight, organ metal(loid)s concentrations). Moreover, higher metal(loid) concentrations were found in the roots compared to the upper parts. Finally, S. alba presented lower metal(loid) concentrations in the aboveground parts compared to S. viminalis, associated with a good growth, which make it a better candidate for phytostabilization of the studied soil.