不同基因型机插稻植株氮素积累运转特性

【目的】明确机械化育插秧条件下不同基因型水稻氮素吸收利用的特点,分析提高其氮素吸收利用的途径。【方法】以3个中籼中熟杂交稻、3个中籼迟熟杂交稻、4个粳稻共计10个品种为材料,采用随机区组大田试验设计,测定不同生育时期各器官干物重和氮素含量、产量等,研究了不同基因型机插稻植株氮素积累、分配和运转特性的差异及其原因。【结果】1)育插秧机械化条件下水稻植株氮素积累符合Logistic曲线增长规律。2)整个生育期机插稻植株含氮量呈下降趋势,粳稻植株的含氮量在生长中期(拔节期—抽穗期)高于杂交籼稻,而后逐渐降低,到成熟期极显著低于杂交籼稻,中籼中熟杂交稻因降低缓慢到成熟期植株含氮量最高。3)粳稻植株的终极氮素积累量最低,中籼中熟杂交稻和中籼迟熟杂交稻终极氮素积累量平均比粳稻高23.0%和33.1%。4)中籼中熟杂交稻抽穗期—成熟期氮素积累量最大,在氮素积累上具有后发优势,且穗部分配率、叶片与茎鞘氮素表观转运率、氮素籽粒生产效率和氮素转运效率均较高,说明育插秧机械化条件下,中籼中熟杂交稻品种的氮素在转运和利用上具有高效性。其中,F优498的终极氮素积累量高,且具有前期积累快,后期运转分配合理等优势。5)中籼迟熟杂交稻氮素积累出现最大增长速率较晚,平稳持续增长时间较长,终极积累量最大,但氮素积累对产量的贡献没有优势。6)粳稻中杂交粳稻69优8号相比其他粳稻品种,氮素积累量大且产量高,也具有氮素转运和利用的高效性。【结论】机插稻植株氮素积累转运特性受不同基因型的显著影响。本研究采用植株含氮量、终极氮素积累量、百千克籽粒吸氮量等反映机插稻氮素吸收转运特性的指标进行比较发现,在育插秧机械化条件下,中籼中熟杂交稻相比中籼迟熟杂交稻和粳稻氮素具有积累转运和利用高效性,其中F优498在氮素积累、分配并促进产量形成方面具有遗传上的优势。中籼迟熟杂交稻虽具有氮素积累量潜力,但氮素积累对水稻产量的贡献相对较低。机插粳稻氮素积累较低,但相比其他粳稻品种机插杂交粳稻69优8号具有氮素积累量大且产量高的潜力,较适合机插。     

The fragrance (fgr) gene in natural populations of wild rice (Oryza rufipogon Griff.)

The Asian cultivated rice, Oryza sativa L. (spp. indica or japonica), is assumed to have originated from one or both of the two wild Asian species, O. rufipogon Griff. and O. nivara Sharma and Shastry. They occur throughout the monsoon Asia and west Oceania. Fragrance is the most important trait among the domesticated characters of basmati and jasmine rice of Asia. The gene for fragrance in a scented rice shows the presence of a mutated portion (i.e., an eight base pair deletion in exon 7) that result in its loss of fragrance. In the present study, 229 wild rice O. rufipogon accessions were genotyped for this locus using a PCR assay. The wild rice species contained the mutated allele of the fgr gene at a low frequencies of 0.23. The surveyed populations were in Hardy–Weinberg equilibrium. This observation supports the hypothesis that the allele for fragrance was already present in the wild rice, and that this trait appeared in scented rice cultivars because of selection by the farmers of genotypes possessing this character during the process of domestication.     

Dual origin of the cultivated rice based on molecular markers of newly collected annual and perennial strains of wild rice species, Oryza nivara and O. rufipogon

The direct ancestor of rice (Oryza sativa L.) is believed to be AA genome wild relatives of rice in Asia. However, the AA genome wild relatives involve both annual and perennial forms. The distribution of the retrotransposon p-SINE1-r2, a short interspersed nuclear element (SINE) at the waxy locus was analyzed in diverse accessions of the AA genome wild relatives of rice (O. rufipogon sensu lato). Most annual wild rice accessions had this retrotransposon, while most perennial types lacked this element, contradicting results to the previous studies. Results presented here suggest that O. sativa has dual origin that lead to indica-japonica differentiation. Results suggest the indica line of rice varieties evolved from the annual genepool of AA genome and the japonica varieties from the perennial genepool of AA genome wild rice.     

Differentiation and distribution of indica and japonica rice varieties along the altitude gradients in Yunnan Province of China as revealed by InDel molecular markers

Indica–japonica variation represents the most significant genetic differentiation in Asian cultivated rice (Oryza sativa L. subsp. indica Kato or subsp. japonica Kato). Understanding the differentiation and distribution patterns of cultivated rice along altitude gradients will facilitate strategic utilization and conservation of rice germplasm from mountainous regions. In this study, we analyzed 203 varieties and 14 wild accessions of rice collected from localities across an altitude gradient between 450 and 2,350 m above sea level in Yunnan, China, applying the “InDel molecular index” developed recently. Results from PCA of the InDel data demonstrated significant genetic differentiation of rice varieties from Yunnan into indica and japonica types. A few cultivars and nearly all wild rice accessions showed only moderate or no differentiation. Further analyses demonstrated a clear distribution pattern of the rice varieties in the mountainous region: indica varieties were grown across the entire altitude gradient in the sampling areas, but most japonica varieties were found above 1,400 m. These results clearly indicated that indica rice could be cultivated in areas at much higher altitudes than those categorized by the traditional methods. The knowledge opens a new dimension for introducing indica rice varieties to mountainous regions at higher altitudes and for selecting rice germplasm in these regions. In addition, the pattern of significant indica–japonica differentiation in rice varieties from Yunnan suggested the exotic origin of cultivated rice, which did not support the hypothesis that Yunnan is a part of the center of origin of rice, although it is certainly one of the centers of genetic diversity for rice.     

Identification of quantitative trait loci associated with shoot sodium accumulation under low potassium conditions in rice plants

Sodium (Na) application has marked beneficial effects on plant growth when the potassium (K) supply is low. Under low K supply, three japonica rice (Oryza sativa L.) cultivars, Koshihikari, Nipponbare, and Sasanishiki, accumulated more Na than three indica cultivars, IR36, IR64, and Kasalath, and the effect of Na application on growth was greater in japonica Koshihikari plants than in indica IR64 plants. A quantitative trait locus (QTL) analysis using a population of backcross inbred lines derived from japonica Koshihikari and indica Kasalath identified two significant loci associated with shoot Na concentration on chromosomes 3 and 6. The quantitative trait locus for shoot Na accumulation on chromosome 6 was confirmed in a population of chromosome segment substitution lines. The major QTL detected in this study could be useful for increasing crop productivity under low K input.     

Genetic diversity associated with conservation of endangered Dongxiang wild rice (<Emphasis Type="Italic">Oryza rufipogon</Emphasis>)

The wild progenitor species (Oryza rufipogon) of Asian cultivated rice (O. sativa L.) is located in Dongxiang county, China which is considered its the northernmost range worldwide. Nine ex situ and three in situ populations of the Dongxiang wild rice (DXWR) and four groups of modern cultivars were genotyped using 21 SSR markers for study of population structure, conservation efficiency and genetic relationship. We demonstrated that the ex situ conservation of the DXWR failed to maintain the genetic identity and reduced genetic diversity. Therefore, in situ conservation is absolutely necessary to maintain the genetic identity, diversity and heterozygosity. Also, in situ conservation is urgently needed because natural populations in DXWR have decreased from nine to three at present due to farming activity and urban expansion. In DXWR, the three surviving in situ populations had greater expected heterozygosity than any cultivated rice, and were genetically closer to japonica than either the male-sterile maintainer or restorer lines, or indica. Japonica has the lowest genetic diversity of cultivated rice. As a result, DXWR is a rich gene pool and is especially valuable for genetic improvement of japonica rice because these O. rufipogon accessions are most closely related to the japonica as compared to O. rufipogon collected anywhere else in the world.     

The influence of European and American wild germplasm in hop (<Emphasis Type="Italic">Humulus lupulus</Emphasis> L.) cultivars

Microsatellite variation at the nuclear and chloroplast genomes was evaluated for wild European and wild American hops, in order to assess the genetic diversity and origin of cultivated hops. Seven nuclear loci and 32 chloroplast loci were used in the analysis of 182 hop accessions including wild European (68), wild American (48), and cultivars (66). A total of 116 alleles were identified using 7 nuclear microsatellites showing different averages of polymorphism and distribution in the wild American and European accessions and cultivars. Two main groups were established as revealed by several statistical analyses; one including European wild accessions and cultivars and a second group consisting of American wild accessions. Three polymorphic chloroplast microsatellite loci were detected, six alleles were scored which defined a total of five haplotypes that were exclusive or presented different distribution between American and European wild accessions. A major influence of the wild European haplotypes was detected among hop cultivars. To the best of our knowledge, this is the first work reporting the use of chloroplast microsatellites in hops.     

Evaluation of the effects of spores and their heat-treated residues from different Bacillus strains on the initial growth of rice plants

This study evaluated the effects of the spores and their heat-treated residues from different strains of Bacillus species (B. pumilus, B. altitudinis, and B. megaterium) on the early growth of paddy rice cultivars, including Hitomebore (short-grain japonica rice), Takanari (high-yielding indica rice), and two new lines, TULK-143-6 and LTAT-29. The spores of seven Bacillus strains positively affected Hitomebore root growth, while, the root volume of TULK-143-6 with inoculation of B. pumilus TUAT1 and JM52, and root length and root surface area of LTAT-29 with inoculation of B. megaterium MAFF301694 were increased significantly. In contrast with Hitomebore, Takanari root growth was significantly inhibited by the spores of six Bacillus strains. Surprisingly, inoculations with the spore residues from all tested Bacillus strains increased the root dry weight of Hitomebore, with the effects of four bacterial strains being significant. Furthermore, there were more Bacillus spores than vegetative cells at different time points during the initial rice growth stage, and most plant samples mainly consisted of Bacillus spores. Thus, the spores of Bacillus species likely promote rice root development.     

Genetic identity and relationships of Iranian apple (Malus?×?domestica Borkh.) cultivars and landraces, wild Malus species and representative old apple cultivars based on simple sequence repeat (SSR) marker analysis

In order to shed light on the role of Iran in apple evolution and domestication, we chose to investigate the relationships of a collection of 159 accessions of wild and domesticated apples including Iranian indigenous apple cultivars and landraces, selected wild species, and old apple scion and rootstock cultivars from different parts of the world. The majority of the wild species belonged to M. sieversii, which is widely believed to be the main maternal wild ancestor of domestic apples, from Kazakhstan and M. orientalis, which is one of the probable minor ancestors of domestic apples, from Turkey and Russia located on the east and west of Iran, respectively. The accessions were assigned into six arbitrary populations for the purpose of generating information on genetic parameters. Nine simple sequence repeat (SSR) loci selected from previous studies in apple were screened over DNA extracted from all the accessions. Results showed that all SSR loci displayed a very high degree of polymorphism with 11–25 alleles per locus. In total, there were 153 alleles across all loci with an average of 17 alleles per locus. The SSR allelic data were then used for estimation of population genetic parameters, including genetic variation statistics, F-statistics, gene flow, genetic identity, genetic distance and then cluster analysis using POPGENE 1.32 software. The F-statistics and gene flow in particular, showed that there was more intra-population than between population variation. The genetic identity and genetic distance estimates, and the dendrogram generated from the un-weighted pair group arithmetic average (UPGMA) method of cluster analysis showed that the Iranian cultivars and landraces were more closely related to M. sieversii from Central Asia (east of Iran) and M. orientalis native to Turkey and Russia than to other accessions of Malus species. Also, the old apple cultivars from different parts of the world have a closer genetic relationship to M. sieversii, M. orientalis and the Iranian apples, than to other wild species. Based on these results, we suggest that the Iranian apples may occupy an intermediate position between the domesticated varieties and wild species. We propose that Iran could be one of the major players in apples’ domestication and transfer from Central Asia to the western countries.     

The Weedy Rice Complex in Costa Rica. I. Morphological Study of Relationships Between Commercial Rice Varieties,Wild <Emphasis Type="Italic">Oryza</Emphasis> Relatives and Weedy Types

Weedy rice is a complex of Oryza morphotypes widely distributed in commercial rice fields, which interfere with rice cultivation, seed production, industrial processing and commercialization of this crop in several countries. The objective of this study was to characterize the weedy rice complex of Costa Rica by comparing it with the cultivated and wild rice species found in the country. A collection of weedy rice accessions, representative of the morphotypes found in the country, was established and characterized. Their morphometric relationships were established by comparing 27 morphological traits with commercial rice cultivars, landraces and wild Oryza species and by performing a multivariate analysis. Twenty-one weedy rice morphotypes were identified among 735 weedy accessions by using a three-digit code based on seed characters. Three principal components (PCs) explained 66.25% of the variation observed. The first PC accounted for 36.21% of the variation and separated CCDD genome type Oryza latifolia and O. grandiglumis from AA genome species O. sativa, O. glumaepatula, O. rufipogon and O. glaberrima. The second (18.9%) and third (11.14%) PCs separated the weedy morphotype groups from the AA genome species O.sativa, O. glaberrima and O. rufipogon. The weedy morphotypes were scattered between the indica commercial rice varieties, the cluster landraces–glaberrima and O. rufipogon. Additionally, a group of morphotypes showed intermediate characteristics between O. sativa and O. rufipogon, suggesting that hybridization could have taken place in the past between these species. None of the morphotypes collected in Costa Rica clustered with the allotetraploids CCDD species or O. glumaepatula.     

Tocopherols,Tocotrienols, and γ‐Oryzanol Contents in Japonica and Indica Subspecies of Rice (Oryza sativa L.) Cultivated in Brazil

Whole rice contains several fat‐soluble phytochemicals such as tocopherols, tocotrienols, and γ‐oryzanol which have been reported to possess beneficial health properties. This study was conducted to determine whether brown rice belonging to indica and japonica subspecies were distinguishable from each other regarding the concentration of these compounds by analyzing 32 genotypes. The fat‐soluble compounds were analyzed by normal‐phase HPLC in a single run. The variability of the compounds analyzed was high, but the mean content of γ‐oryzanol across all samples was significantly higher (P < 0.01) in japonica (246.3 mg/kg) than in indica rice (190.1 mg/kg). Similar differences were found for total vitamin E contents which were 24.2 mg/kg in japonica and 17.1 mg/kg in indica rice, respectively. In japonica rice, α‐tocopherol, α‐tocotrienol, and γ‐tocotrienol were the most abundant homologs, while in indica rice the most abundant were γ‐tocotrienol, α‐tocopherol, and α‐tocotrienol. A significant Pearson coefficient (0.80, P < 0.001) between α‐tocopherol and α‐tocotrienol levels was found, independent of the subspecies. Both compounds were positively correlated to total tocols and γ‐oryzanol contents. Although more studies are needed to evaluate the interference of growing rice in different environments and multiple years, the present study provided information on natural variations of the vitamin E isomers and the γ‐oryzanol contents in different rice genotypes.     

Analysis of Genetic Diversity and Relationships in Waxy Rice (Oryza sativa L.) using AFLP and ISSR Markers

Opaque endosperm is the main phenotypic indicator for waxy rice, but other phenotypic and genotypic variation among waxy rice accessions has largely been ignored. Previous studies showed that wide diversity in starch physiochemical properties exists in both indica and japonica waxy rices, especially for starch gelatinization temperature (GT) which could be divided into a high- and a low-GT group. In the present study, amplified fragment length polymorphism (AFLP) and inter-simple sequence repeat (ISSR) molecular markers were employed to examine genetic diversity and relationships of 56 waxy rice accessions. A total of 358 AFLP fragments were amplified with five primer combinations, showing a high level of polymorphism (78.3%). A total of 190 ISSR bands were generated with a single primer and a primer pair, showing a very high level of polymorphism (92.2%). The genetic distance matrices obtained from the two sets of markers were significantly correlated (r = 0.731, P = 0.004). The dendrogram generated with combined AFLP and ISSR markers could clearly differentiate the indica and japonica groups. Newly released varieties and breeding lines within each subspecies tended to be clustered together, whereas landraces were more distantly placed in the dendrogram. Only one AFLP band was found specific to the indica type, while no specific bands were found for starch GT. The implications for the conservation and breeding of waxy rice are discussed.     

Identification of <Emphasis Type="Italic">SUB1A</Emphasis> alleles from wild rice <Emphasis Type="Italic">Oryza rufipogon</Emphasis> Griff.

Submergence stress is a major constraint to rice production in South and Southeast Asia. Most rice (Oryza sativa L.) cultivars die within a week of complete submergence, while a small number of accessions are submergence-tolerant for up to 2 weeks or more. These cultivars have the tolerant allele of the SUB1A gene, one of three ERF genes at this locus on rice chromosome 9. In all O. sativa varieties studied, the SUB1A gene is limited to a subset of indica accessions of O. sativa. Thus far, there has been no published report of the SUB1A gene in wild rice species. Here we report evidence of the SUB1A gene found in wild species of O. rufipogon Griff. accessions by the use of degenerate primers corresponding to the most highly conserved regions of the SUB1 locus. The results indicated that two SUB1A-like alleles, e.g. OrSub1A-1 and OrSub1A-2, were identified from two O. rufipogon accessions. Submergence treatment shows that both of the accessions with SUB1A-like genes were submergence-intolerant. This preliminary study provides insight into the origin and allelic variation of SUB1A, an agronomically important gene that is rapidly being introduced into widely-grown rice cultivars.     

Genetic evidence for speciation in <Emphasis Type="Italic">Cannabis</Emphasis> (Cannabaceae)

Sample populations of 157 Cannabis accessions of diverse geographic origin were surveyed for allozyme variation at 17 gene loci. The frequencies of 52 alleles were subjected to principal components analysis. A scatter plot revealed two major groups of accessions. The sativa gene pool includes fiber/seed landraces from Europe, Asia Minor, and Central Asia, and ruderal populations from Eastern Europe. The indica gene pool includes fiber/seed landraces from eastern Asia, narrow-leafleted drug strains from southern Asia, Africa, and Latin America, wide-leafleted drug strains from Afghanistan and Pakistan, and feral populations from India and Nepal. A third putative gene pool includes ruderal populations from Central Asia. None of the previous taxonomic concepts that were tested adequately circumscribe the sativa and indica gene pools. A polytypic concept of Cannabis is proposed, which recognizes three species, C. sativa, C. indica and C. ruderalis, and seven putative taxa.     

Cloning of genome-specific repetitive DNA sequences in wild rice (O. rufipogon Griff.), and the development of Ty3-gypsy retrotransposon-based SSAP marker for distinguishing rice (O. sativa L.) indica and japonica subspecies

In the rice genome, insertions and eliminations of transposable elements have generated numerous transposon insertion polymorphisms (TIPs). Common wild rice (O. rufipogon Griff.), the ancestor of Asian cultivated rice (O. sativa L.), carries abundant genetic variations. To find subspecies-specific (SS) markers that can distinguish O. sativa ssp. indica and ssp. japonica, some long terminal repeat (LTR) sequences (sc1-14) of AA genome-specific RIRE retrotransposon were isolated from O. rufipogon genome. Sequences sc1 and sc12 were successfully utilized to develop the SS marker system based on retrotransposon inserted position polymorphisms. Twenty-two SS markers (ssi1-9, ssj1-13) were developed, where ssi1-9 are the indica-specific types, and ssj1-13 the japonica-specific types. The average accuracy of these markers in distinguishing the two subspecies is over 85%. SS marker ssj-10 can distinguish the two subspecies at 100% accuracy. Principal component analysis (PCA) showed that these markers could successfully distinguish indica from japonica varieties, regardless of their geographical origin.     

氮肥水平对粳型软米食味特征与质构特性的影响

【目的】旨在明确粳型软米食味品质及其质构特征对氮肥水平的响应差异及各指标间的关系。【方法】在稻麦两熟制条件下,选用江苏省生产上具有代表性的粳型软米品种南粳9108和南粳5055为试验材料,通过设置4种施氮水平0、150、225和300 kg/hm2,分析了不同施氮水平对粳型软米的食味品质与质构特征的影响,并对各指标间的关系进行了系统分析。【结果】1)在设计范围内,随施氮量的增加,稻米完整性持续增加,但香气、光泽、味道和食味值等指标呈下降趋势,粳型软米食味指标对氮肥的敏感程度表现为口感光泽食味值味道香气完整性,说明氮肥水平对粳型软米口感和光泽的影响程度较大,而对香气和完整性的影响程度较小。2)随着施氮量的增加,硬度、粘聚型、咀嚼度和回复性呈先增加后降低趋势,最大值在N 225 kg/hm2;粘着性呈先降低后升高趋势,最低值在N 225 kg/hm2处理;弹性不受氮肥水平影响,粳型软米质构指标对氮肥的敏感程度表现为咀嚼度硬度回复性粘着性粘聚性,说明氮肥水平对粳型软米的胶粘性、咀嚼度、硬度影响较大,而对粘聚性的影响程度较小。3)南粳9108的香气、光泽、味道、口感和食味值均高于南粳5055,完整性低于南粳5055,并且其各食味指标的变异系数均高于南粳5055,说明南粳9108食味特征优于南粳5055,并且前者对氮肥的敏感性强于后者。4)南粳9108的硬度、粘着性、弹性、咀嚼度均低于南粳5055,粘聚性、胶粘性均高于南粳5055,并且各质构指标的变异系数均高于南粳5055,说明南粳9108质构特征较优并且前者对氮肥的敏感性弱于后者。5)相关分析表明,食味值与香气、光泽、味道、口感呈极显著正相关,与完整性呈极显著负相关;口感与光泽呈显著正相关,与完整性呈显著负相关;完整性与香气、光泽呈极显著负相关;光泽与香气呈极显著正相关;回复性与硬度极显著正相关,与粘聚性呈显著正相关。【结论】氮肥水平和品种对粳型软米食味品质与质构特征具有显著影响。增加施氮量将降低供试的两个品种米饭的口感、光泽、味道和香气,但增加其完整性,施氮量小于225 kg/hm2,施氮可以增加米饭的硬度、粘聚型、咀嚼度和回复性。因此,粳型软米生产中应特别重视氮肥的施用水平,以保持其优良的风味。     

Genotypic variation in grain mercury accumulation of lowland rice

A pot experiment with 38 commonly cultivated rice cultivars from the Yangtze River Delta was conducted in a greenhouse to study the effect of mercury (Hg) contamination of a paddy soil (4.7 mg Hg [kg soil]^–1) on crop growth and Hg accumulation in the grains. Mercury contamination differentially affected growth, grain yield, and Hg accumulation in brown rice of the tested cultivars. The average Hg concentration in the grains was significantly higher (p < 0.01) when plants were grown in the Hg‐contaminated compared to the control soil. Averaged over cultivars, the Hg concentration in brown rice exceeded the maximum permissible limit of 20 μg Hg kg^–1. Increasing Hg concentrations were associated with grain‐yield declines up to 70%. This yield decline was mainly due to a reduction in the number of panicles. Japonica cultivars tended to be generally less affected by Hg than indica cultivars. The two japonica cultivars Jiahua and Chunjiang 026 showed both low Hg concentrations and no Hg‐induced grain‐yield reduction. These cultivars may be preferred candidates for cultivation in Hg‐contaminated soils or for studies on possible Hg‐exclusion mechanisms.     

Genetic diversity in Japanese aromatic rice (Oryza sativa L.) as revealed by nuclear and organelle DNA markers

Aromatic rice (Oryza sativa L.) cultivated in Japan is regionally differentiated by geographical distribution and characteristics. We aimed to characterize the lineage of Japanese aromatic rice using DNA markers. Based on analyses with nuclear SSR markers, we found that Japanese aromatic rice cultivars belong, with one exception, to japonica but showed some differences from authentic japonica and were divided into two clades that were distributed in western and eastern Japan, respectively. Further analyses with organelle markers showed that most of the cultivars in eastern Japan had cytoplasm characterized by tropical japonica, whereas most of those in western Japan had cytoplasm characterized by temperate japonica. We postulate that the ancestor of the cultivars in eastern Japan differs from those of the cultivars in western Japan, and that the two groups may have been separately introduced from Taiwan into Japan. The cytoplasm of aromatic rice cultivars in western Japan may have originated from tropical japonica and been substituted into the cytoplasm of temperate japonica through hybridization between tropical japonica as a male parent and temperate japonica as a female parent.     

Genetic Variation of Glutelin Acidic Subunit Polypeptides in Bangladesh Rice Genetic Resources

Bangladesh rice genetic resources collected from six distinct regions of the country were examined to obtain the diversity in glutelin acidic subunit polypeptides. Seed glutelins from 576 Bangladesh rice cultivars representing seven ecotypes were analyzed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), isoelectric focusing (IEF) electrophoresis and two-dimensional electrophoresis (2-DE: SDS-PAGE/IEF) analyses. Glutelin acidic subunit was separated into four bands, α-1, α-2, α-3 and α-4, and the variation in each of bands was detected by SDS-PAGE analysis. A higher molecular size component of α-1(α-1′) was identified in the cultivars tested. In case of α-2, α-2H with high molecular mass, α-2L with low molecular mass and α-2H/L were detected. α-3 band variation showed α-3H, α-3L, and α-3H/L, while for α-4, α-4H, α-4L bands were identified. In IEF analysis, a total of 16 bands with independent pI ranging from pI 6.30 to 7.52 were identified for the glutelin acidic subunit among the cultivars. The maximum and minimum numbers of IEF bands found were 13 and 9, respectively. The α-2L less cultivars were also lacking in pI 6.80 polypeptide in IEF. Result of 2-DE showed that pI 6.80 polypeptide was the main component of α-2L band. Transplanted Aman ecotype was the most diverse with respect to glutelin variation. Geographical distribution of glutelin variation in the Transplanted Aman ecotype differed according to the regions. The above results indicate that Bangladesh rice cultivars possess great genetic diversity in glutelin acidic subunit polypeptides. This study of indigenous rice cultivars from Bangladesh provides useful information regarding their breeding potential.     

Ecogeographic and genetic diversity based on morphological characters of indigenous rice (Oryza sativa L.) in Yunnan, China

Yunnan is one of the largest centres of genetic ecological diversity and the richest area for elite germplasm of rice (O. sativa L.) resources in the world. Its indigenous rice average diversity index of six ecological groups are, in turn, javanica (1.2319) > aman (1.1738) > communis (1.1726) > nuda (1.1618) > aus (1.1371) > boro (0.9889), and there are great differences between indica (1.1454) and japonica (1.2081). The indigenous rice in Yunnan can be divided into 58 varieties, almost the total number found in China, and the cultivars account for 8.6% of the total cultivars in China. A great difference in ecological diversity index of rice resources between prefectures or counties in Yunnan province also exists, with the southwest part (Lincang, Xishuangbanna, Dehong, Simao) and southeast part (Wenshan) having been found to be the largest centre of genetic diversity, as their average genetic diversity index ranges from 1.2735 to 1.2036, especially. The average diversity index of the Cangyuan, Gengma, Zhenkang, Yongde, Yingjiang, Jinghong, Menghai, Shuangjiang, Ruili, Longchuan, Mojiang, Wenshan and Guangnan counties, in particular, have an average diversity index ranging from 0.8 to1.0. On the contrary, in Diqing, Dongchuan, Kunming, Lijiang, Qujing, Chuxiong, it is comparatively low, i.e., 0.7843–1.1075. Differences in the ecological diversity index of rice resources between rice regions are small, only 1.1322 to 1.2849.