Heads you win,tails you lose: Life‐history traits predict invasion and extinction risk of the world's freshwater fishes

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Population viability and perturbation analyses to support recovery of imperilled Eastern Sand Darter (Ammocrypta pellucida)

Small‐bodied freshwater fishes are often understudied, with the result that data gaps create uncertainties that can complicate and constrain conservation strategies aimed at species recovery. Use of matrix models and perturbation population viability analyses (PVA) are ideally suited for use in studying the consequences of life‐history parameter variation and environmental stochasticity to better understand the fate of threatened small‐bodied fishes. We use data for Eastern Sand Darter (Ammocrypta pellucida) populations from the Thames River, Canada, to explore the consequences of life‐history uncertainties such as age at maturation, multiple clutch sizes and age‐specific fertility for population recovery in this species. Environmental stochasticity acting on all life‐history parameters was found to pose significant risks for the continued viability of lower Thames River populations, with significant chances of local extinction predicted under current conditions. The intrinsic rate of population increase was most sensitive to 0+ survival rates, clutch size and clutch number. As demonstrated here, population models can successfully provide a means of exploring the population dynamics of small‐bodied fishes and can inform managers of risks posed by factors acting on life‐history parameters to affect continued population viability. Management actions for Eastern Sand Darter should focus on strategies designed to ensure successful spawning and improvement of 0+ survival rates, through programmes aimed at the protection, enhancement or recovery of additional spawning and juvenile rearing habitats.     

Biogeographic freshwater fish pattern legacy revealed despite rapid socio‐economic changes in China

Understanding drivers of freshwater fish assemblages is critically important for biodiversity conservation strategies, especially in rapidly developing countries, which often have environmental protections lagging behind economic development. The influences of natural and human factors in structuring fish assemblages and their relative contributions are likely to change given the increasing magnitude of human activities. To discriminate natural and human drivers of fish diversity and assemblage patterns in developing countries with rapid socio‐economic development, a dataset of 908 freshwater fish species and 13 metrics including three categories of both natural (i.e., biogeographic) and human drivers (i.e., economic growth, inland fisheries) in China were analysed with machine learning algorithms (i.e., self‐organizing map, random forest). Here, we found that biogeographic drivers explained 21.8% of the observed fish assemblage patterns in China and remained stronger predictors when compared to human drivers (i.e., 15.6%, respectively). Freshwater fish species richness was positively correlated to rainfall, air temperature, surface water area and inland fisheries production but negatively correlated with urbanization. In addition, the strong structuring effects of climatic variables on Chinese fish richness patterns suggested that the fish assemblages could be particularly vulnerable to climate change. Our results showed that natural biogeographic factors still dominate in driving freshwater fish assemblage patterns despite increased human disturbances on aquatic ecosystems in a rapidly developing country. These findings consequently suggested that we should consider both natural (e.g., climate) and human (e.g., urbanization, inland fisheries) factors when establishing aquatic conservation strategies and priorities for developing countries that are experiencing rapid socio‐economic changes.     

Alternative migratory strategies are widespread in subyearling Chinook salmon

Variation in life history traits within and across species is known to reflect adaptations to different environmental drivers through a diversity of mechanisms. Trait variation can also help buffer species and populations against extinction in fluctuating environments and against anthropogenic disturbances. Here, we examine the distribution and drivers of Ocean‐type Chinook salmon (Oncorhynchus tschawytscha) juvenile migratory life histories. We defined alternative migratory strategies according to whether individuals reared in the stream (natal rearing) or left shortly after hatching to rear elsewhere (non‐natal rearing). We then evaluated the frequency of migratory strategies across 16 populations with time series extending up to 25 years and evaluated the environmental variables that influenced variation in migration strategy. We found bimodal migration patterns and abrupt transitions in migrant sizes across all populations, supporting the widespread nature of alternative migratory strategies. Additionally, we found that the amount of freshwater rearing habitat available to juveniles, relative juvenile density and spring flow patterns significantly influenced the overall migration pattern for populations. Smaller streams and higher conspecific densities generally produced more non‐natal rearing migrants and larger streams and lower conspecific densities producing more natal rearing migrants. Our results shed light on previously unexplored patterns of juvenile migratory strategies and encourage broader consideration for how current conservation actions perform at protecting juvenile migratory diversity.     

Fish and mussels: Importance of fish for freshwater mussel conservation

Co‐extinctions are increasingly recognized as one of the major processes leading to the global biodiversity crisis, but there is still limited scientific evidence on the magnitude of potential impacts and causal mechanisms responsible for the decline of affiliate (dependent) species. Freshwater mussels (Bivalvia, Unionida), one of the most threatened faunal groups on Earth, need to pass through a parasitic larval (glochidia) phase using fishes as hosts to complete their life cycle. Here, we provide a synthesis of published evidence on the fish–mussel relationship to explore possible patterns in co‐extinction risk and discuss the main threats affecting this interaction. We retrieved 205 publications until December 2015, most of which were performed in North America, completed under laboratory conditions and were aimed at characterizing the life cycle and/or determining the suitable fish hosts for freshwater mussels. Mussel species were reported to infest between one and 53 fish species, with some fish families (e.g., Cyprinidae and Percidae) being used more often as hosts than others. No relationship was found between the breadth of host use and the extinction risk of freshwater mussels. Very few studies focused on threats affecting the fish–mussel relationship, a knowledge gap that may impair the application of future conservation measures. Here, we identify a variety of threats that may negatively affect fish species, document and discuss the concomitant impacts on freshwater mussels, and suggest directions for future studies.     

Contrasting influence of flow regime on freshwater fishes displaying diadromous and nondiadromous life histories

Flow variability structures freshwater fish community traits and life‐history patterns such as migration patterns between fresh and saltwater (diadromy). Few studies, however, have explored relationships between diadromy and flow regime while accounting for other abiotic covariables. The present paper used canonical ordinations to remove the shared variation between groups of explanatory variables that explain variation in fish communities and examine two objectives with New Zealand fishes: (i) to compare the unique contributions of Hydrological Regime, Climate, Habitat and Spatial‐Seasonal data sets to the variation of diadromous and nondiadromous fishes and (ii) to compare the relative contributions of a Hydrological Variability and Low‐Flow data set to community structure of both life‐history patterns. All explanatory variables explained a total of 20.15% and 29.58% of the variation in diadromous and nondiadromous fishes, respectively. Objective 1 analyses showed that the largest unique component of variation was explained by Hydrological Regime for nondiadromous fishes (12.17%), while Climate uniquely explained the most variation in diadromous fishes (4.3%), followed closely by Hydrological Regime (3.08%). Objective 2 analyses showed that Hydrological Variability uniquely explained five and 11 times more variation than the Low‐Flow data set in diadromous and nondiadromous fishes, respectively. Findings illustrate the importance of hydrological regime to New Zealand freshwater fishes. Specifically, aspects of hydrological variability uniquely account for more variation than aspects of low flow. Differing relative influences of hydrology between life‐history patterns suggest that diadromy may mediate the influence of flow regime. Results outline difficulties for environmental flow settings when biota display differing life histories.     

Energy allocation patterns in a multiple spawning sunfish: evidence for an income‐based reproductive strategy

Timing of reproduction is an important life‐history trait that varies among species as a function of energy allocation strategy, particularly as individuals are influenced by seasonal variations prior to and during the reproductive season. This study investigated size‐ and sex‐based seasonal patterns of energy allocation in bluegill, Lepomis macrochirus (Rafinesque), a species that spawns repeatedly throughout the summer, by quantifying gonad, liver and mesenteric fat masses. Results indicate that bluegill delay production of gonad tissue until the onset of the spawning season and use an ‘income spawning’ approach. Comparisons of energetic trends with crappies, Pomoxis annularis (Rafinesque) and P. nigromaculatus (Lesueur), a confamilial species of relatively similar size and morphology that spawns in the spring, highlight the flexibility of energy allocation patterns even among relatively similar fishes and shed light on bluegill life‐history strategies.     

Fishes of southern South America: a story driven by temperature

The latitudinal extension of southern South America imposes a thermal gradient that affects the structure of marine and freshwater fish assemblages and the biology of the species through direct exposure to the temperature gradients or by means of a web of historical and ecological relationships. We have reviewed biological and ecological data of marine and freshwater fishes from the southern Neotropics, including Patagonia, and report several examples of dependence on temperature, from glacial times to today’s climate change. We were able to identify historic and present effects on the diversity of fish assemblages, isolation, southern limits for the distribution of species, and morphological variation among populations. There is a wide range of characteristics that exemplify an adaptation to low temperatures, including biochemical peculiarities, physiological adjustments, and alternative life history patterns, and these appear in both freshwater and marine, and native and exotic fishes. The consequences of stable temperature regimes in both the ocean and thermal streams deserve special mention as these shape specialists under conditions of low selective pressure. At present, habitat use and interactions among species are being subject to changes as consequences of water temperature, and some of these are already evident in the northern and southern hemispheres.     

A critical reflection on the success of rearing and culturing juvenile freshwater mussels with a focus on the endangered freshwater pearl mussel (Margaritifera margaritifera L.)

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Genetic, abiotic and social influences on sex differentiation in cichlid fishes and the evolution of sequential hermaphroditism

Genetic and environmental factors may interact to control sex determination in fishes. A common pattern of initial female differentiation and subsequent male transformation before maturation in non‐hermaphroditic fishes and after maturation in sequentially hermaphroditic fishes has suggested that changes in developmental timing may be responsible for the evolution of various expressions of sexual lability. Sequential hermaphroditism is rare in freshwater fishes, but investigators report degrees of sexual lability at four distinct life stages in cichlid fishes. Some cichlids undergo genetic sex determination and are not labile. Lability at the larval stage allows temperature or pH to determine sex. Social interactions apparently determine sex at the juvenile stage in the Midas cichlid (Amphilophus citrinellus). Most reports of post‐maturational sex change in cichlids are anecdotal or unsubstantiated. The common occurrence of same‐sex spawning suggests that many species are incapable of sex change. Sequential hermaphroditism is concluded not to be typical, except for the checkerboard cichlid (Crenicara punctulata), which regularly undergoes functional female‐to‐male transformation. Expression of sexual lability at four life stages in one family of fishes corroborates a role for developmental timing in the evolution of sequential hermaphroditism as well as environmentally controlled sex determination. The broad phylogenetic distribution of sexual lability in cichlids indicates that processes capable of producing sex change are generally present. The rarity of sequential hermaphroditism in cichlids and possibly other freshwater fishes is likely due to unpredictability of food and therefore potential mate distributions compared with coral reef habitats.     

Persistence of native fishes in small streams of the urbanized San Francisco Estuary,California: acknowledging the role of urban streams in native fish conservation

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Reliance on lakes by salmon,trout and charr (Oncorhynchus,Salmo and Salvelinus): An evaluation of spawning habitats,rearing strategies and trophic polymorphisms

Salmonid fishes may reside within or migrate between stream and lake habitats, or undergo anadromous migrations between freshwater and the ocean. While the degree of anadromy of salmonids has been thoroughly compared, no analogous review has examined the degree of lake use. To assess the extent of reliance on lake habitat in this family, we considered 16 species of salmon, trout and charr from the genera Oncorhynchus, Salmo and Salvelinus, comparing their (a) use of lakes as spawning habitat, (b) rearing strategies in lakes, and (c) occurrence and diversity of lacustrine trophic polymorphism. In identifying the primary life‐history patterns of each species and exploring the lesser‐known lacustrine behaviours, we found that the extent of reliance on lakes exhibits a negative association with the degree of anadromy. Oncorhynchus rely least on lakes, Salmo to an intermediate level and Salvelinus the most, opposite of the general prevalence of anadromy among these genera. Lakes are critical to adfluvial and lake‐resident salmonids, but they also support anadromous and fluvial life histories by providing spawning, rearing, overwintering and/or summer refuge habitat. Adfluviality, although a non‐anadromous life history, consists of similar migration‐related traits and behaviours as anadromy, including the parr–smolt transformation, sex‐biased patterns of migration and residency, and the presence of precocious males. Lakes support life‐history variants, reproductive ecotypes and trophic morphs unique to lacustrine habitat. Therefore, conservation of salmonids is dependent on maintaining the diversity and quality of their habitats, including lakes.     

Juvenile coho salmon movement,growth and survival in a coastal basin of southern Oregon

Juvenile salmonids display highly variable spatial and temporal patterns of early dispersal that are influenced by density‐dependent and density‐independent factors. Although juvenile coho salmon (Oncorhynchus kisutch) movement patterns in streams and their relationship with body mass and growth have been examined in previous studies, most observations were limited to one season or one stream section. In this study, we monitored the movement of juvenile coho salmon throughout their period of residence in a coastal basin to identify prevalent dispersal strategies and their relationships with body mass, growth rates and survival. Our results revealed seasonally and spatially variable movement patterns. Juvenile coho salmon that dispersed to tidally affected reaches soon after emergence remained more mobile and expressed lower site fidelity than those individuals that remained in upper riverine reaches. We did not detect significantly different growth rates between sedentary and mobile individuals. Although a greater proportion of sedentary than mobile fish survived winter to emigrate from the creek in the spring, reach of residence at the onset of winter influenced these survival estimates. Hence, apparent summer‐to‐smolt survival for mobile individuals was greater than for sedentary fish in tidally influenced reaches, whereas in riverine reaches the sedentary strategy seemed to be favoured. Our research identified complex movement patterns that reflect phenotypic and life history variation, and underscores the importance of maintaining diverse freshwater and estuarine habitats that support juvenile coho salmon before marine migration.     

Intrinsic and extrinsic drivers of life‐history variability for a south‐western cutthroat trout

The impacts of climate change on cold‐water fishes will likely negatively manifest in populations at the trailing edge of their distributions. Rio Grande cutthroat trout (Oncorhynchus clarkii virginalis, RGCT) occupy arid south‐western U.S. streams at the southern‐most edge of all cutthroat trout distributions, making RGCT particularly vulnerable to the anticipated warming and drying in this region. We hypothesised that RGCT possess a portfolio of life‐history traits that aid in their persistence within streams of varying temperature and stream drying conditions. We used otolith and multistate capture–mark–recapture data to determine how these environmental constraints influence life‐history trait expression (length‐ and age‐at‐maturity) and demography in RGCT populations from northern New Mexico, United States. We found evidence that RGCT reached maturity fastest at sites with warm stream temperatures and low densities. We did not find a strong relationship between discharge and any demographic rate, although apparent survival of mature RGCT decreased as stream temperature increased. Our study suggests plasticity in trait expression may be a life‐history characteristic which can assist trailing edge populations like RGCT persist in a changing climate.     

A caution for conservation stocking as an approach for recovering Atlantic eels

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The emblematic minnows of the North American Great Plains: A synthesis of threats and conservation opportunities

Anthropogenic changes to the Great Plains rivers of North America have had a large, negative effect on a reproductive guild of pelagic‐broadcast spawning (PBS) cyprinid fishes. The group is phylogenetically diverse, with multiple origins of the PBS mode. However, because of incomplete life‐history information, PBS designation often relies only on habitat and egg characteristics. We identified 17 known or candidate PBS fishes and systematically synthesized the literature on their biology and ecology in relation to major threats to persistence. Research output on an individual species was unrelated to conservation status, but positively correlated with breadth of distribution. The PBS species have opportunistic life‐history strategies and are typically short‐lived (generally 1–3 years) fishes. Many PBS species have truncated ranges showing declines in both distribution and abundance, especially those endemic to the Rio Grande catchment. Fundamental habitat associations are unknown for many species, particularly regarding seasonal shifts and early life stages. Critical thermal tolerances have been quantified for five PBS species and are generally >35°C. Turbidity and salinity changes are linked to responses at multiple life stages, but information is lacking on interactions between water quality and quantity. Hydrologic alteration appears to be a primary threat to PBS species, through complex interactions with landscape fragmentation, and habitat change. We highlight areas where scientific and management communities are lacking information and underline areas of potential conservation gain.     

Relative influences of catchment‐ and reach‐scale abiotic factors on freshwater fish communities in rivers of northeastern Mesoamerica

Esselman PC, Allan JD. Relative influences of catchment‐ and reach‐scale abiotic factors on freshwater fish communities in rivers of northeastern Mesoamerica. Ecology of Freshwater Fish 2010: 19: 439–454. © 2010 John Wiley & Sons A/S Abstract – While the abiotic factors important to freshwater fish assemblages at a reach scale are well understood, studies of larger scale constraints have yielded variable conclusions, spurring a need for further studies in new biogeographic contexts. This study investigated the importance of catchment‐ and reach‐scale abiotic factors to variation in freshwater fish assemblages in rivers of northeastern Mesoamerica. Abiotic variables and fish data from 72 sampling sites on main stem rivers of Belize were used with partial constrained ordination to determine the proportion of spatially structured and unstructured variation in fish presence and absence, relative abundance, and community metrics explained by catchment‐ and reach‐scale environmental factors. Results showed that, combined, catchment and reach variables explained a large portion of the total variation in the fish assemblage data (54–75%), and that catchment environment explained a greater portion of variation (42–63%) than reach environment (34–50%). Variables representing landscape position (local elevation, watershed area) and their reach‐level correlates (channel width, depth variation, and substrate) correlated strongly to the fish assemblage data. Our results suggest that landscape‐scale factors have a stronger relative influence on assemblages than environmental conditions at the reach scale within our study area. These results contrast with past findings that showed greater local scale influence in landscapes with low anthropogenic disturbance levels. Our findings suggest that biodiversity conservation efforts should consider assemblage variation across a longitudinal gradient, and that a multi‐catchment region is a biologically relevant scale for fish conservation planning and coordination in northeastern Mesoamerica.     

Colonisation tactics of three temperate catadromous species,eel Anguilla anguilla,mullet Liza ramada and flounder Plathychtys flesus,revealed by Bayesian multielemental otolith microchemistry approach

Daverat F, Martin J, Fablet R, Pécheyran C. Colonisation tactics of three temperate catadromous species, eel Anguilla anguilla, mullet Liza ramada and flounder Plathychtys flesus, revealed by Bayesian multielemental otolith microchemistry approach.
Ecology of Freshwater Fish 2011: 20: 42–51. © 2010 John Wiley & Sons A/S Abstract – The colonisation of Gironde (SW France) river catchment by juvenile, eel, Anguilla anguilla, flounder Platychtys flesus and thinlipp mullet Liza ramada was investigated comparatively using Sr:Ca and Ba:Ca composition of otolith. The relation between Sr, Ba and habitat was investigated based on Sr and Ba water composition sampled each month along the estuary‐river gradient. A total of 50 mullets, 30 eels and 47 flounders were collected in the Gironde river catchment. Analysis was performed with a Femtosecond LA‐ICPMS along a trajectory from the core to the edge. Sr and Ba water concentrations discriminated three habitats within the Gironde system, the lower estuary, the upper estuary and the freshwater sites. A signal processing method based on Gaussian hidden Markov models was applied to the multielemental life‐history data. The linear model used to allocate a Gironde habitat to coupled Sr, Ca values was parameterised with seasonal patterns and magnitude of Sr and Ba water values in the different habitats. The results showed that the three species used three different habitats and they had a large diversity of habitat use patterns with resident and nomadic tactics. Resident tactics were less frequent than nomadic tactics that suggested individual fish used two or more habitats. Mullet used a wider range of habitats in the lower part of the estuary than eel and flounder and switched habitats more frequently. Flounders tended to colonise initially freshwater, and then estuarine habitats later in life while mullets used the entire range of available catchment habitats throughout their life.     

Diet and trophic niche overlap of native and nonnative fishes in the Gila River,USA: implications for native fish conservation

Pilger TJ, Gido KB, Propst DL. Diet and trophic niche overlap of native and nonnative fishes in the Gila River, USA: implications for native fish conservation. Ecology of Freshwater Fish 2010: 19: 300–321. © 2010 John Wiley & Sons A/S Abstract –  The upper Gila River basin is one of the few unimpounded drainage basins west of the Continental Divide, and as such is a stronghold for endemic fishes in the region. Nevertheless, multiple nonindigenous fishes potentially threaten the persistence of native fishes, and little is known of the trophic ecology of either native or nonnative fishes in this system. Gut contents and stable isotopes (¹³C and ¹⁵N) were used to identify trophic relationships, trophic niche overlap and evaluate potential interactions among native and nonnative fishes. Both native and nonnative fishes fed across multiple trophic levels. In general, adult native suckers had lower ¹⁵N signatures and consumed more algae and detritus than smaller native fish, including juvenile suckers. Adult nonnative smallmouth bass (Micropterus dolomieu), yellow bullhead (Ameiurus natalis) and two species of trout preyed on small‐bodied fishes and predaceous aquatic invertebrates leading to significantly higher trophic positions than small and large‐bodied native fishes. Thus, the presence of these nonnative fishes extended community food‐chain lengths by foraging at higher trophic levels. Although predation on juvenile native fishes might threaten persistence of native fishes, the high degree of omnivory suggests that impacts of nonnative predators may be lessened and dependent on environmental variability.     

Biogeographical region and environmental conditions drive functional traits of estuarine fish assemblages worldwide

Assessing trait–environment relationships is crucial for predicting effects of natural and human‐induced environmental change on biota. We compiled a global database of fish assemblages in estuaries, functional traits of fishes and ecosystem features of estuaries. And we quantified the relative importance of ecosystem features as drivers of patterns of fish functional traits among estuaries worldwide (i.e. drivers of the proportions of fish traits). In addition to biogeographical context, two main environmental gradients regulate traits patterns: firstly temperature, and secondly estuary size and hydrological connectivity of the estuary with the marine ecosystem. Overall, estuaries in colder regions, with larger areas and with higher hydrological connectivity with the marine ecosystem, have higher proportions of marine fish (versus freshwater), macrocarnivores and planktivores (versus omnivores, herbivores and detritivores) and larger fish, with greater maximum depth of distribution and longer lifespan. The observed trait patterns and trait–environment relationships are likely generated by multiple causal processes linked to physiological constraints due to temperature and salinity, size‐dependent biotic interactions, as well as habitat availability and connectivity. Biogeographical context and environmental conditions drive species richness and composition, and present results show that they also drive assemblage traits. The observed trait patterns and trait–environment relationships suggest that assemblage composition is determined by the functional role of species within ecosystems. Conservation strategies should be coordinated globally and ensure protection of an array of estuaries that differ in ecosystem features, even if some of those estuaries do not support high species richness.